RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	VPS30	Q02948	557 aa		4.38	□□□□□ -1.71
PBP4	YDL053C	CLU1	Q03690	1277 aa	Known RBP	4.38	□□□□□ -1.71
PBP4	YDL053C	TMA10	Q06177	86 aa		4.38	□□□□□ -1.71
PBP4	YDL053C	ESC8	Q08119	714 aa		4.38	□□□□□ -1.71
PBP4	YDL053C	RPD3	P32561	433 aa		4.37	□□□□□ -1.71
PBP4	YDL053C	LST4	P34239	828 aa		4.37	□□□□□ -1.71
PBP4	YDL053C	PLB1	P39105	664 aa		4.37	□□□□□ -1.71
PBP4	YDL053C	URM1	P40554	99 aa	Predicted RBP	4.37	□□□□□ -1.71
PBP4	YDL053C	CHA4	P43634	648 aa		4.37	□□□□□ -1.71
PBP4	YDL053C	NIT3	P49954	291 aa		4.37	□□□□□ -1.71
PBP4	YDL053C	YGR283C	P53336	341 aa	Predicted RBP	4.37	□□□□□ -1.71
PBP4	YDL053C	HDA1	P53973	706 aa		4.37	□□□□□ -1.71
PBP4	YDL053C	SSL1	Q04673	461 aa	Predicted RBP	4.37	□□□□□ -1.71
PBP4	YDL053C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
PBP4	YDL053C	PHO8	P11491	566 aa		4.36	□□□□□ -1.71
PBP4	YDL053C	GDH3	P39708	457 aa		4.36	□□□□□ -1.71
PBP4	YDL053C	CEP3	P40969	608 aa		4.36	□□□□□ -1.71
PBP4	YDL053C	OSW7	P43611	510 aa		4.36	□□□□□ -1.71
PBP4	YDL053C	TAF1	P46677	1066 aa		4.36	□□□□□ -1.71
PBP4	YDL053C	YKR011C	Q02209	353 aa		4.36	□□□□□ -1.71
PBP4	YDL053C	YLR125W	Q12138	136 aa		4.36	□□□□□ -1.71
PBP4	YDL053C	UPC2	Q12151	913 aa		4.36	□□□□□ -1.71
PBP4	YDL053C	RPS9A	O13516	197 aa	Known RBP	4.35	□□□□□ -1.71
PBP4	YDL053C	STE11	P23561	717 aa		4.35	□□□□□ -1.71
PBP4	YDL053C	TYE7	P33122	291 aa	Predicted RBP	4.35	□□□□□ -1.71
PBP4	YDL053C	YIL108W	P40483	696 aa	Known RBP	4.35	□□□□□ -1.71
PBP4	YDL053C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
PBP4	YDL053C	HSV2	P50079	448 aa	Predicted RBP	4.35	□□□□□ -1.71
PBP4	YDL053C	MAL11	P53048	616 aa		4.35	□□□□□ -1.71
PBP4	YDL053C	NCS6	P53088	359 aa		4.35	□□□□□ -1.71
PBP4	YDL053C	NPC2	Q12408	173 aa		4.35	□□□□□ -1.71
PBP4	YDL053C	KCS1	Q12494	1050 aa		4.35	□□□□□ -1.71
PBP4	YDL053C	FBP1	P09201	348 aa		4.34	□□□□□ -1.71
PBP4	YDL053C	DAL7	P21826	554 aa		4.34	□□□□□ -1.71
PBP4	YDL053C	RAD53	P22216	821 aa		4.34	□□□□□ -1.71
PBP4	YDL053C	CTS1	P29029	562 aa		4.34	□□□□□ -1.71
PBP4	YDL053C	STE14	P32584	239 aa		4.34	□□□□□ -1.71
PBP4	YDL053C	SPC29	P33419	253 aa		4.34	□□□□□ -1.71
PBP4	YDL053C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
PBP4	YDL053C	MCM6	P53091	1017 aa	Known RBP	4.34	□□□□□ -1.71
PBP4	YDL053C	DAM1	P53267	343 aa		4.34	□□□□□ -1.71
PBP4	YDL053C	NOG2	P53742	486 aa	Known RBP	4.34	□□□□□ -1.71
PBP4	YDL053C	SED4	P25365	1065 aa		4.33	□□□□□ -1.72
PBP4	YDL053C	YCR015C	P25616	317 aa		4.33	□□□□□ -1.72
PBP4	YDL053C	GIP4	P39732	760 aa		4.33	□□□□□ -1.72
PBP4	YDL053C	MNN10	P50108	393 aa	Known RBP	4.33	□□□□□ -1.72
PBP4	YDL053C	TAD1	P53065	400 aa		4.33	□□□□□ -1.72
PBP4	YDL053C	PUS2	P53167	370 aa		4.33	□□□□□ -1.72
PBP4	YDL053C	MET7	Q08645	548 aa		4.33	□□□□□ -1.72
PBP4	YDL053C	YCL002C	P25565	263 aa		4.32	□□□□□ -1.72
PBP4	YDL053C	CYS3	P31373	394 aa	Known RBP	4.32	□□□□□ -1.72
PBP4	YDL053C	THI4	P32318	326 aa		4.32	□□□□□ -1.72
PBP4	YDL053C	YKL222C	P35995	705 aa		4.32	□□□□□ -1.72
PBP4	YDL053C	SHM2	P37291	469 aa	Known RBP	4.32	□□□□□ -1.72
PBP4	YDL053C	CTF8	P38877	133 aa		4.32	□□□□□ -1.72
PBP4	YDL053C	SDP1	P40479	209 aa		4.32	□□□□□ -1.72
PBP4	YDL053C	TY4A-J	P47023	414 aa		4.32	□□□□□ -1.72
PBP4	YDL053C	RNH70	P53331	553 aa		4.32	□□□□□ -1.72
PBP4	YDL053C	ATP25	Q03153	612 aa		4.32	□□□□□ -1.72
PBP4	YDL053C	LRS4	Q04087	347 aa	Known RBP	4.32	□□□□□ -1.72
PBP4	YDL053C	YDR514C	Q04408	483 aa		4.32	□□□□□ -1.72
PBP4	YDL053C	REH1	Q06709	432 aa		4.32	□□□□□ -1.72
PBP4	YDL053C	EXG2	P52911	562 aa		4.31	□□□□□ -1.72
PBP4	YDL053C	HAL9	Q12180	1030 aa		4.31	□□□□□ -1.72
PBP4	YDL053C	YOR022C	Q12204	715 aa		4.31	□□□□□ -1.72
PBP4	YDL053C	MEF1	P25039	761 aa		4.3	□□□□□ -1.72
PBP4	YDL053C	PER1	P25625	357 aa		4.3	□□□□□ -1.72
PBP4	YDL053C	MSH2	P25847	964 aa		4.3	□□□□□ -1.72
PBP4	YDL053C	RRP14	P36080	434 aa	Known RBP	4.3	□□□□□ -1.72
PBP4	YDL053C	ALG12	P53730	551 aa		4.3	□□□□□ -1.72
PBP4	YDL053C	DUS1	P53759	423 aa	Known RBP	4.3	□□□□□ -1.72
PBP4	YDL053C	RSC3	Q06639	885 aa		4.3	□□□□□ -1.72
PBP4	YDL053C	MDM12	Q92328	271 aa		4.3	□□□□□ -1.72
PBP4	YDL053C	PRC1	P00729	532 aa		4.29	□□□□□ -1.72
PBP4	YDL053C	MET6	P05694	767 aa	Known RBP	4.29	□□□□□ -1.72
PBP4	YDL053C	KAR4	P25583	335 aa		4.29	□□□□□ -1.72
PBP4	YDL053C	SEC21	P32074	935 aa	Known RBP	4.29	□□□□□ -1.72
PBP4	YDL053C	DCG1	P32460	244 aa		4.29	□□□□□ -1.72
PBP4	YDL053C	PPG1	P32838	368 aa		4.29	□□□□□ -1.72
PBP4	YDL053C	SAP190	P36123	1033 aa		4.29	□□□□□ -1.72
PBP4	YDL053C	YHR078W	P38799	552 aa		4.29	□□□□□ -1.72
PBP4	YDL053C	SLU7	Q02775	382 aa	Known RBP	4.29	□□□□□ -1.72
PBP4	YDL053C	CDC9	P04819	755 aa		4.28	□□□□□ -1.72
PBP4	YDL053C	PMA1	P05030	918 aa	Known RBP	4.28	□□□□□ -1.72
PBP4	YDL053C	HCM1	P25364	564 aa		4.28	□□□□□ -1.72
PBP4	YDL053C	SET5	P38890	526 aa	Known RBP	4.28	□□□□□ -1.72
PBP4	YDL053C	DSS1	P39112	969 aa		4.28	□□□□□ -1.72
PBP4	YDL053C	HXT16	P47185	567 aa		4.28	□□□□□ -1.72
PBP4	YDL053C	PHO23	P50947	330 aa		4.28	□□□□□ -1.72
PBP4	YDL053C	POB3	Q04636	552 aa	Known RBP	4.28	□□□□□ -1.72
PBP4	YDL053C	GUP2	Q08929	609 aa		4.28	□□□□□ -1.72
PBP4	YDL053C	THI21	Q08975	551 aa		4.28	□□□□□ -1.72
PBP4	YDL053C	LAS17	Q12446	633 aa		4.28	□□□□□ -1.72
PBP4	YDL053C	YBR182C-A	Q8TGU6	64 aa		4.28	□□□□□ -1.72
PBP4	YDL053C	TUB3	P09734	445 aa	Known RBP	4.27	□□□□□ -1.73
PBP4	YDL053C	GSY1	P23337	708 aa		4.27	□□□□□ -1.73
PBP4	YDL053C	CAD1	P24813	409 aa	Known RBP	4.27	□□□□□ -1.73
PBP4	YDL053C	VBA3	P25594	458 aa		4.27	□□□□□ -1.73
PBP4	YDL053C	PEX6	P33760	1030 aa		4.27	□□□□□ -1.73
PBP4	YDL053C	MTC2	P34246	357 aa		4.27	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 143.1 ms