RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C MIP6P38760 659 aaKnown RBP8.15□□□□□ -1.1
RRP43YCR035C FYV8P46949 817 aaKnown RBP8.15□□□□□ -1.1
RRP43YCR035C ULP1Q02724 621 aa8.15□□□□□ -1.1
RRP43YCR035C COQ9Q05779 260 aa8.15□□□□□ -1.1
RRP43YCR035C CUR1Q06469 252 aa8.15□□□□□ -1.1
RRP43YCR035C SPO75Q07798 868 aa8.15□□□□□ -1.1
RRP43YCR035C ISU2Q12056 156 aa8.15□□□□□ -1.1
RRP43YCR035C SUT2Q12286 268 aa8.15□□□□□ -1.1
RRP43YCR035C YOR131CQ12486 218 aa8.15□□□□□ -1.1
RRP43YCR035C MAK16P10962 306 aaPredicted RBP8.14□□□□□ -1.11
RRP43YCR035C KIN82P25341 720 aa8.14□□□□□ -1.11
RRP43YCR035C SEC65P29478 273 aa8.14□□□□□ -1.11
RRP43YCR035C RME1P32338 300 aaKnown RBP8.14□□□□□ -1.11
RRP43YCR035C YSC83P32792 385 aa8.14□□□□□ -1.11
RRP43YCR035C ACF4P47129 309 aa8.14□□□□□ -1.11
RRP43YCR035C VID30P53076 958 aa8.14□□□□□ -1.11
RRP43YCR035C CAF130P53280 1122 aaPredicted RBP8.14□□□□□ -1.11
RRP43YCR035C RTT102P53330 157 aa8.14□□□□□ -1.11
RRP43YCR035C DAK1P54838 584 aaKnown RBP8.14□□□□□ -1.11
RRP43YCR035C COG4Q06096 861 aa8.14□□□□□ -1.11
RRP43YCR035C RPS6AP0CX37 236 aaKnown RBP8.13□□□□□ -1.11
RRP43YCR035C RPS6BP0CX38 236 aaPredicted RBP8.13□□□□□ -1.11
RRP43YCR035C SSD1P24276 1250 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
RRP43YCR035C EFT1P32324 842 aaKnown RBP8.13□□□□□ -1.11
RRP43YCR035C SMY2P32909 740 aaKnown RBP8.13□□□□□ -1.11
RRP43YCR035C VPS35P34110 944 aa8.13□□□□□ -1.11
RRP43YCR035C EBP2P36049 427 aaKnown RBP8.13□□□□□ -1.11
RRP43YCR035C SHM1P37292 490 aaPredicted RBP8.13□□□□□ -1.11
RRP43YCR035C SAP30P38429 201 aa8.13□□□□□ -1.11
RRP43YCR035C UBP5P39944 805 aa8.13□□□□□ -1.11
RRP43YCR035C TAM41P53230 385 aa8.13□□□□□ -1.11
RRP43YCR035C VPS75P53853 264 aa8.13□□□□□ -1.11
RRP43YCR035C MSC2Q03455 724 aa8.13□□□□□ -1.11
RRP43YCR035C IES4Q08561 116 aa8.13□□□□□ -1.11
RRP43YCR035C OSW2Q12202 724 aa8.13□□□□□ -1.11
RRP43YCR035C ATG11Q12527 1178 aa8.13□□□□□ -1.11
RRP43YCR035C CYC8P14922 966 aa8.12□□□□□ -1.11
RRP43YCR035C PHO13P19881 312 aa8.12□□□□□ -1.11
RRP43YCR035C MNN4P36044 1178 aa8.12□□□□□ -1.11
RRP43YCR035C AFG3P39925 761 aa8.12□□□□□ -1.11
RRP43YCR035C NMA111P53920 997 aa8.12□□□□□ -1.11
RRP43YCR035C GIR2Q03768 265 aaPredicted RBP8.12□□□□□ -1.11
RRP43YCR035C YPR109WQ06104 294 aa8.12□□□□□ -1.11
RRP43YCR035C RTP1Q12751 981 aa8.12□□□□□ -1.11
RRP43YCR035C SWI6P09959 803 aa8.11□□□□□ -1.11
RRP43YCR035C CHS2P14180 963 aa8.11□□□□□ -1.11
RRP43YCR035C SPO11P23179 398 aa8.11□□□□□ -1.11
RRP43YCR035C PAH1P32567 862 aa8.11□□□□□ -1.11
RRP43YCR035C GUA1P38625 525 aaKnown RBP8.11□□□□□ -1.11
RRP43YCR035C RTT107P38850 1070 aa8.11□□□□□ -1.11
RRP43YCR035C LCB2P40970 561 aa8.11□□□□□ -1.11
RRP43YCR035C SAD1P43589 448 aa8.11□□□□□ -1.11
RRP43YCR035C ARH1P48360 493 aa8.11□□□□□ -1.11
RRP43YCR035C TPO2P53283 614 aa8.11□□□□□ -1.11
RRP43YCR035C YNL146WP53906 100 aa8.11□□□□□ -1.11
RRP43YCR035C MLH2Q07980 695 aa8.11□□□□□ -1.11
RRP43YCR035C CWC2Q12046 339 aaPredicted RBP8.11□□□□□ -1.11
RRP43YCR035C SNA3P14359 133 aa8.1□□□□□ -1.11
RRP43YCR035C APL1P27351 700 aa8.1□□□□□ -1.11
RRP43YCR035C MFT1P33441 392 aaKnown RBP8.1□□□□□ -1.11
RRP43YCR035C PXL1P36166 706 aa8.1□□□□□ -1.11
RRP43YCR035C AIM21P40563 679 aa8.1□□□□□ -1.11
RRP43YCR035C STR2P47164 639 aa8.1□□□□□ -1.11
RRP43YCR035C TIM8P57744 87 aa8.1□□□□□ -1.11
RRP43YCR035C VTC3Q02725 835 aa8.1□□□□□ -1.11
RRP43YCR035C YML020WQ03722 664 aa8.1□□□□□ -1.11
RRP43YCR035C UTP14Q04500 899 aaKnown RBP8.1□□□□□ -1.11
RRP43YCR035C FAL1Q12099 399 aaKnown RBP8.1□□□□□ -1.11
RRP43YCR035C ATG9Q12142 997 aa8.1□□□□□ -1.11
RRP43YCR035C HIF1Q12373 385 aa8.1□□□□□ -1.11
RRP43YCR035C MDM20Q12387 796 aaKnown RBP8.1□□□□□ -1.11
RRP43YCR035C ECM29P38737 1868 aa8.1□□□□□ -1.11
RRP43YCR035C SSB1P11484 613 aaKnown RBP8.09□□□□□ -1.11
RRP43YCR035C AFT1P22149 690 aa8.09□□□□□ -1.11
RRP43YCR035C MUD1P32605 298 aaKnown RBP8.09□□□□□ -1.11
RRP43YCR035C KTR2P33550 425 aa8.09□□□□□ -1.11
RRP43YCR035C SSB2P40150 613 aaKnown RBP8.09□□□□□ -1.11
RRP43YCR035C JJJ3P47138 172 aa8.09□□□□□ -1.11
RRP43YCR035C HFM1P51979 1187 aa8.09□□□□□ -1.11
RRP43YCR035C VPS62P53285 467 aa8.09□□□□□ -1.11
RRP43YCR035C VPS72Q03388 795 aa8.09□□□□□ -1.11
RRP43YCR035C YLR287CQ05881 355 aa8.09□□□□□ -1.11
RRP43YCR035C RLP24Q07915 199 aaKnown RBP8.09□□□□□ -1.11
RRP43YCR035C APL4Q12028 832 aa8.09□□□□□ -1.11
RRP43YCR035C HFI1Q12060 488 aa8.09□□□□□ -1.11
RRP43YCR035C RRP6Q12149 733 aaKnown RBP8.09□□□□□ -1.11
RRP43YCR035C DPH2P32461 534 aa8.08□□□□□ -1.12
RRP43YCR035C TMT1P32643 299 aa8.08□□□□□ -1.12
RRP43YCR035C PIN4P34217 668 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
RRP43YCR035C MNR2P35724 969 aa8.08□□□□□ -1.12
RRP43YCR035C YKL023WP36103 277 aaKnown RBP8.08□□□□□ -1.12
RRP43YCR035C UIP5P36137 443 aa8.08□□□□□ -1.12
RRP43YCR035C VID24P38263 362 aa8.08□□□□□ -1.12
RRP43YCR035C EFM2P38347 419 aa8.08□□□□□ -1.12
RRP43YCR035C HSH155P49955 971 aaKnown RBP8.08□□□□□ -1.12
RRP43YCR035C CUL3P53202 744 aa8.08□□□□□ -1.12
RRP43YCR035C ENV11P53246 860 aa8.08□□□□□ -1.12
RRP43YCR035C UME1Q03010 460 aa8.08□□□□□ -1.12
RRP43YCR035C CDC53Q12018 815 aaKnown RBP8.08□□□□□ -1.12
RRP43YCR035C WHI2P12611 486 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms