RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W COG8Q04632 607 aa6.2□□□□□ -1.42
CKS1YBR135W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
CKS1YBR135W HXT16P47185 567 aa6.19□□□□□ -1.42
CKS1YBR135W YGR237CP50089 785 aa6.19□□□□□ -1.42
CKS1YBR135W FOL2P51601 243 aaKnown RBP6.19□□□□□ -1.42
CKS1YBR135W RAI1P53063 387 aaKnown RBP6.19□□□□□ -1.42
CKS1YBR135W TAD1P53065 400 aa6.19□□□□□ -1.42
CKS1YBR135W SNP1Q00916 300 aaPredicted RBP6.19□□□□□ -1.42
CKS1YBR135W UME1Q03010 460 aa6.19□□□□□ -1.42
CKS1YBR135W CDA1Q06702 301 aa6.19□□□□□ -1.42
CKS1YBR135W MED7Q08278 222 aa6.19□□□□□ -1.42
CKS1YBR135W SFL1P20134 766 aa6.18□□□□□ -1.42
CKS1YBR135W DAL7P21826 554 aa6.18□□□□□ -1.42
CKS1YBR135W SRP101P32916 621 aa6.18□□□□□ -1.42
CKS1YBR135W STE13P33894 931 aa6.18□□□□□ -1.42
CKS1YBR135W MET13P53128 600 aa6.18□□□□□ -1.42
CKS1YBR135W GPG1P53130 126 aa6.18□□□□□ -1.42
CKS1YBR135W HDA1P53973 706 aa6.18□□□□□ -1.42
CKS1YBR135W HSF1P10961 833 aa6.17□□□□□ -1.42
CKS1YBR135W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
CKS1YBR135W HOG1P32485 435 aa6.17□□□□□ -1.42
CKS1YBR135W PAF1P38351 445 aa6.17□□□□□ -1.42
CKS1YBR135W LRS4Q04087 347 aaKnown RBP6.17□□□□□ -1.42
CKS1YBR135W YCL002CP25565 263 aa6.16□□□□□ -1.42
CKS1YBR135W TOS1P38288 455 aa6.16□□□□□ -1.42
CKS1YBR135W PCM1P38628 557 aaKnown RBP6.16□□□□□ -1.42
CKS1YBR135W ALY2P47029 1046 aa6.16□□□□□ -1.42
CKS1YBR135W YGR012WP53206 393 aa6.16□□□□□ -1.42
CKS1YBR135W YKR011CQ02209 353 aa6.16□□□□□ -1.42
CKS1YBR135W VPS30Q02948 557 aa6.16□□□□□ -1.42
CKS1YBR135W CMP2P14747 604 aa6.15□□□□□ -1.42
CKS1YBR135W MRC1P25588 1096 aa6.15□□□□□ -1.42
CKS1YBR135W HSP78P33416 811 aa6.15□□□□□ -1.42
CKS1YBR135W ZRG8P40021 1076 aa6.15□□□□□ -1.42
CKS1YBR135W RLP7P40693 322 aaKnown RBP6.15□□□□□ -1.42
CKS1YBR135W ATG33Q06485 197 aa6.15□□□□□ -1.42
CKS1YBR135W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
CKS1YBR135W YBR182C-AQ8TGU6 64 aa6.15□□□□□ -1.42
CKS1YBR135W RPS9AO13516 197 aaKnown RBP6.14□□□□□ -1.43
CKS1YBR135W HMG1P12683 1054 aa6.14□□□□□ -1.43
CKS1YBR135W TYE7P33122 291 aaPredicted RBP6.14□□□□□ -1.43
CKS1YBR135W TYS1P36421 394 aaKnown RBP6.14□□□□□ -1.43
CKS1YBR135W CEP3P40969 608 aa6.14□□□□□ -1.43
CKS1YBR135W ALO1P54783 526 aaKnown RBP6.14□□□□□ -1.43
CKS1YBR135W MTQ2Q03920 221 aaPredicted RBP6.14□□□□□ -1.43
CKS1YBR135W GUP2Q08929 609 aa6.14□□□□□ -1.43
CKS1YBR135W CYC1P00044 109 aaPredicted RBP6.13□□□□□ -1.43
CKS1YBR135W GAL10P04397 699 aa6.13□□□□□ -1.43
CKS1YBR135W ENA1P13587 1091 aa6.13□□□□□ -1.43
CKS1YBR135W MIH1P23748 554 aa6.13□□□□□ -1.43
CKS1YBR135W CYS3P31373 394 aaKnown RBP6.13□□□□□ -1.43
CKS1YBR135W RPD3P32561 433 aa6.13□□□□□ -1.43
CKS1YBR135W PUB1P32588 453 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
CKS1YBR135W RPN10P38886 268 aaKnown RBP6.13□□□□□ -1.43
CKS1YBR135W SET5P38890 526 aaKnown RBP6.13□□□□□ -1.43
CKS1YBR135W MND2P40577 368 aa6.13□□□□□ -1.43
CKS1YBR135W YJR096WP47137 282 aa6.13□□□□□ -1.43
CKS1YBR135W ENA2Q01896 1091 aa6.13□□□□□ -1.43
CKS1YBR135W NHX1Q04121 633 aa6.13□□□□□ -1.43
CKS1YBR135W YDR338CQ05497 695 aa6.13□□□□□ -1.43
CKS1YBR135W GUD1Q07729 489 aa6.13□□□□□ -1.43
CKS1YBR135W FAP7Q12055 197 aaPredicted RBP6.13□□□□□ -1.43
CKS1YBR135W ENA5Q12691 1091 aa6.13□□□□□ -1.43
CKS1YBR135W DIF1O13577 133 aa6.12□□□□□ -1.43
CKS1YBR135W GPP1P41277 250 aaKnown RBP6.12□□□□□ -1.43
CKS1YBR135W AIM14P53109 570 aa6.12□□□□□ -1.43
CKS1YBR135W BRE4Q07660 1125 aa6.12□□□□□ -1.43
CKS1YBR135W YDL177CQ12257 170 aa6.12□□□□□ -1.43
CKS1YBR135W GIN4Q12263 1142 aa6.12□□□□□ -1.43
CKS1YBR135W TMA17Q12513 150 aa6.12□□□□□ -1.43
CKS1YBR135W SPE1P08432 466 aa6.11□□□□□ -1.43
CKS1YBR135W FBP1P09201 348 aa6.11□□□□□ -1.43
CKS1YBR135W ETP1P38748 585 aaKnown RBP6.11□□□□□ -1.43
CKS1YBR135W CTH1P47976 325 aa6.11□□□□□ -1.43
CKS1YBR135W PSP2P50109 593 aaKnown RBP6.11□□□□□ -1.43
CKS1YBR135W HFD1Q04458 532 aa6.11□□□□□ -1.43
CKS1YBR135W SSL1Q04673 461 aaPredicted RBP6.11□□□□□ -1.43
CKS1YBR135W THI21Q08975 551 aa6.11□□□□□ -1.43
CKS1YBR135W YOR022CQ12204 715 aa6.11□□□□□ -1.43
CKS1YBR135W PRC1P00729 532 aa6.1□□□□□ -1.43
CKS1YBR135W SAP190P36123 1033 aa6.1□□□□□ -1.43
CKS1YBR135W CKB2P38930 258 aa6.1□□□□□ -1.43
CKS1YBR135W YIL108WP40483 696 aaKnown RBP6.1□□□□□ -1.43
CKS1YBR135W PUS2P53167 370 aa6.1□□□□□ -1.43
CKS1YBR135W HAL9Q12180 1030 aa6.1□□□□□ -1.43
CKS1YBR135W CCR4P31384 837 aaKnown RBP6.09□□□□□ -1.43
CKS1YBR135W PRP19P32523 503 aaKnown RBP6.09□□□□□ -1.43
CKS1YBR135W HSL7P38274 827 aa6.09□□□□□ -1.43
CKS1YBR135W SHR5P41912 237 aa6.09□□□□□ -1.43
CKS1YBR135W FOL1P53848 824 aa6.09□□□□□ -1.43
CKS1YBR135W ADY3Q07732 790 aa6.09□□□□□ -1.43
CKS1YBR135W ATG19P35193 415 aa6.08□□□□□ -1.44
CKS1YBR135W POA1P38218 177 aa6.08□□□□□ -1.44
CKS1YBR135W DOT6P40059 670 aaKnown RBP6.08□□□□□ -1.44
CKS1YBR135W YJR008WP47085 338 aa6.08□□□□□ -1.44
CKS1YBR135W YJR120WP47157 116 aa6.08□□□□□ -1.44
CKS1YBR135W UBC9P50623 157 aaPredicted RBP6.08□□□□□ -1.44
CKS1YBR135W DUS1P53759 423 aaKnown RBP6.08□□□□□ -1.44
CKS1YBR135W SNO2P53823 222 aa6.08□□□□□ -1.44
CKS1YBR135W PLB2Q03674 706 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 100.1 ms