RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 SkilQ60665 675 aa15.15■□□□□ 0.02
Ddx55-202ENSMUST00000111438 AtrnQ9WU60 1428 aa15.15■□□□□ 0.02
Ddx55-202ENSMUST00000111438 CanxP35564 591 aaKnown RBP15.15■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Igflr1Q3U4N7 345 aa15.15■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Adora1Q60612 326 aa15.15■□□□□ 0.02
Ddx55-202ENSMUST00000111438 Ezh2Q61188 746 aaKnown RBP15.15■□□□□ 0.02
Ddx55-202ENSMUST00000111438 NexnQ7TPW1 607 aa15.15■□□□□ 0.02
Ddx55-202ENSMUST00000111438 CltaO08585 235 aa15.14■□□□□ 0.01
Ddx55-202ENSMUST00000111438 LifrP42703 1092 aa15.14■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Smc4Q8CG47 1286 aa15.14■□□□□ 0.01
Ddx55-202ENSMUST00000111438 CpzQ8R4V4 654 aa15.14■□□□□ 0.01
Ddx55-202ENSMUST00000111438 CarsQ9ER72 831 aaKnown RBP15.14■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Mcmdc2E9Q956 681 aa15.13■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Zbtb38Q3LR78 1197 aa15.13■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Slc4a10Q5DTL9 1118 aa15.13■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Prl3d2F6R3P9 224 aa15.13■□□□□ 0.01
Ddx55-202ENSMUST00000111438 OscarQ8VBT3 265 aa15.13■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Aldh8a1Q8BH00 487 aa15.12■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Tmem87bQ8BKU8 555 aa15.12■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Pa2g4P50580 394 aaKnown RBP15.12■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Cyp7a1Q64505 503 aa15.12■□□□□ 0.01
Ddx55-202ENSMUST00000111438 4931408C20RikE9PWP9 1381 aa15.12■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Abcc4E9Q236 1325 aa15.11■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Pde4bB1AWC9 736 aa15.11■□□□□ 0.01
Ddx55-202ENSMUST00000111438 1810065E05RikQ5NC41 235 aa15.11■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Arid3aQ62431 601 aa15.11■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Eif4g2Q62448 906 aaKnown RBP15.11■□□□□ 0.01
Ddx55-202ENSMUST00000111438 FanclQ9CR14 375 aa15.11■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Ttc14Q9CSP9 761 aa15.11■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Msl1Q6PDM1 616 aa15.11■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Cfap44E9Q5M6 1843 aa15.11■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Foxo3Q9WVH4 672 aa15.1■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Atg4a-psA0A0G2JFS9 396 aa15.1■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Atg4aQ8C9S8 396 aa15.1■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Chmp5Q9D7S9 219 aa15.1■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Col23a1Q8K4G2 532 aa15.09■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Rtn4Q99P72 1162 aaKnown RBP15.09■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Dbndd1Q9CZ00 160 aa15.09■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Col4a5Q63ZW6 1691 aa15.09■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Ambra1A2AH22 1300 aa15.09■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Prl3d3A0A0M6L0J6 224 aa15.09■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Trim34bJ3QNR8 485 aa15.09■□□□□ 0.01
Ddx55-202ENSMUST00000111438 ErfeQ6PGN1 340 aa15.09■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Znf609Q8BZ47 1413 aa15.09■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Brd1E9PZ26 1189 aaKnown RBP15.08■□□□□ 0.01
Ddx55-202ENSMUST00000111438 BcanQ61361 883 aa15.08■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Zbtb3Q91X45 518 aa15.08■□□□□ 0.01
Ddx55-202ENSMUST00000111438 Smarca5Q91ZW3 1051 aaKnown RBP15.08■□□□□ 0
Ddx55-202ENSMUST00000111438 Prom2Q3UUY6 835 aa15.08■□□□□ 0
Ddx55-202ENSMUST00000111438 Jarid2Q62315 1234 aa15.08■□□□□ 0
Ddx55-202ENSMUST00000111438 Cetn4Q8K4K1 168 aa15.08■□□□□ 0
Ddx55-202ENSMUST00000111438 Slurp2P0DP59 97 aa15.07■□□□□ 0
Ddx55-202ENSMUST00000111438 Znf692Q3U381 531 aa15.07■□□□□ 0
Ddx55-202ENSMUST00000111438 Nol10Q5RJG1 687 aaKnown RBP15.07■□□□□ 0
Ddx55-202ENSMUST00000111438 Cgnl1Q6AW69 1298 aa15.07■□□□□ 0
Ddx55-202ENSMUST00000111438 Gcc1Q9D4H2 778 aa15.07■□□□□ 0
Ddx55-202ENSMUST00000111438 Cct4P80315 539 aaKnown RBP15.07■□□□□ 0
Ddx55-202ENSMUST00000111438 Rbm27Q5SFM8 1060 aaKnown RBP15.07■□□□□ 0
Ddx55-202ENSMUST00000111438 Sf3b3Q921M3 1217 aaKnown RBP15.07■□□□□ 0
Ddx55-202ENSMUST00000111438 Zswim8Q3UHH1 1832 aaKnown RBP15.06■□□□□ 0
Ddx55-202ENSMUST00000111438 Sult6b1P0CC03 303 aa15.06■□□□□ 0
Ddx55-202ENSMUST00000111438 Prdm11A2AGX3 565 aa15.06■□□□□ 0
Ddx55-202ENSMUST00000111438 Ccdc85cE9Q6B2 420 aa15.06■□□□□ 0
Ddx55-202ENSMUST00000111438 Aknad1E9Q8N6 675 aa15.06■□□□□ 0
Ddx55-202ENSMUST00000111438 Itga6Q61739 1091 aa15.06■□□□□ 0
Ddx55-202ENSMUST00000111438 Atg9aQ68FE2 551 aa15.06■□□□□ 0
Ddx55-202ENSMUST00000111438 EspnQ9ET47 871 aa15.06■□□□□ 0
Ddx55-202ENSMUST00000111438 Phrf1A6H619 1682 aa15.05■□□□□ 0
Ddx55-202ENSMUST00000111438 Q8C5K5 320 aa15.05■□□□□ 0
Ddx55-202ENSMUST00000111438 Dbr1Q923B1 550 aa15.05■□□□□ -0
Ddx55-202ENSMUST00000111438 Ciao1Q99KN2 339 aa15.05■□□□□ -0
Ddx55-202ENSMUST00000111438 Scn11aQ9R053 1765 aa15.05■□□□□ -0
Ddx55-202ENSMUST00000111438 Ets1P27577 440 aa15.04■□□□□ -0
Ddx55-202ENSMUST00000111438 Slc38a10Q5I012 1090 aa15.04■□□□□ -0
Ddx55-202ENSMUST00000111438 B4galnt3Q6L8S8 986 aa15.04■□□□□ -0
Ddx55-202ENSMUST00000111438 Dhx38Q80X98 1228 aa15.04■□□□□ -0
Ddx55-202ENSMUST00000111438 Pdcl3Q8BVF2 240 aa15.04■□□□□ -0
Ddx55-202ENSMUST00000111438 Eya2O08575 532 aa15.04■□□□□ -0
Ddx55-202ENSMUST00000111438 Ppp4r3aQ6P2K6 820 aa15.04■□□□□ -0
Ddx55-202ENSMUST00000111438 Gja10Q9WUS4 505 aa15.04■□□□□ -0
Ddx55-202ENSMUST00000111438 Col3a1P08121 1464 aa15.03■□□□□ -0
Ddx55-202ENSMUST00000111438 Mcm2P97310 904 aa15.03■□□□□ -0
Ddx55-202ENSMUST00000111438 Emilin1Q99K41 1017 aa15.03■□□□□ -0
Ddx55-202ENSMUST00000111438 Pnmal2G3X9N3 661 aa15.03■□□□□ -0
Ddx55-202ENSMUST00000111438 Dis3l2Q8CI75 870 aaKnown RBP15.03■□□□□ -0
Ddx55-202ENSMUST00000111438 Tmc2Q8R4P4 888 aa15.03■□□□□ -0
Ddx55-202ENSMUST00000111438 LratQ9JI60 231 aa15.03■□□□□ -0
Ddx55-202ENSMUST00000111438 Itgb4A2A863 1818 aa15.03■□□□□ -0
Ddx55-202ENSMUST00000111438 Nlrp1aQ2LKU9 1182 aa15.02■□□□□ -0
Ddx55-202ENSMUST00000111438 Taok2Q6ZQ29 1240 aa15.02■□□□□ -0
Ddx55-202ENSMUST00000111438 IncenpQ9WU62 880 aa15.02■□□□□ -0
Ddx55-202ENSMUST00000111438 Hoxa7P02830 229 aa15.02□□□□□ -0.01
Ddx55-202ENSMUST00000111438 Snrpa1P57784 255 aaKnown RBP15.02□□□□□ -0.01
Ddx55-202ENSMUST00000111438 Wdhd1P59328 1117 aa15.02□□□□□ -0.01
Ddx55-202ENSMUST00000111438 Trpc5Q9QX29 975 aa15.02□□□□□ -0.01
Ddx55-202ENSMUST00000111438 Znfx1Q8R151 1909 aaKnown RBP15.02□□□□□ -0.01
Ddx55-202ENSMUST00000111438 AppP12023 770 aa15.01□□□□□ -0.01
Ddx55-202ENSMUST00000111438 Gpr182P43142 395 aa15.01□□□□□ -0.01
Ddx55-202ENSMUST00000111438 Ftl2P49945 183 aa15.01□□□□□ -0.01
Ddx55-202ENSMUST00000111438 Edc3Q8K2D3 508 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms