Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm25239-201ENSMUST00000174915 86 ntBASIC47.84■■■■■ 5.25
Trim34bJ3QNR8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC44.22■■■■■ 4.67
Trim34bJ3QNR8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC43.64■■■■■ 4.58
Trim34bJ3QNR8 Gm15042-201ENSMUST00000120212 883 ntBASIC41.82■■■■■ 4.29
Trim34bJ3QNR8 Gm24109-201ENSMUST00000175489 103 ntBASIC41.42■■■■■ 4.22
Trim34bJ3QNR8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.95■■■■■ 4.15
Trim34bJ3QNR8 Gm15045-201ENSMUST00000117359 883 ntBASIC40.87■■■■■ 4.13
Trim34bJ3QNR8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
Trim34bJ3QNR8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC40.38■■■■■ 4.05
Trim34bJ3QNR8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
Trim34bJ3QNR8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
Trim34bJ3QNR8 Gm23366-201ENSMUST00000175022 89 ntBASIC39.97■■■■□ 3.99
Trim34bJ3QNR8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
Trim34bJ3QNR8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.66■■■■□ 3.94
Trim34bJ3QNR8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
Trim34bJ3QNR8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Trim34bJ3QNR8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38.63■■■■□ 3.77
Trim34bJ3QNR8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.63■■■■□ 3.77
Trim34bJ3QNR8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38.62■■■■□ 3.77
Trim34bJ3QNR8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.58■■■■□ 3.77
Trim34bJ3QNR8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Trim34bJ3QNR8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC38.38■■■■□ 3.73
Trim34bJ3QNR8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC38.24■■■■□ 3.71
Trim34bJ3QNR8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Trim34bJ3QNR8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.07■■■■□ 3.68
Trim34bJ3QNR8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
Trim34bJ3QNR8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.05■■■■□ 3.68
Trim34bJ3QNR8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Trim34bJ3QNR8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
Trim34bJ3QNR8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Trim34bJ3QNR8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.83■■■■□ 3.65
Trim34bJ3QNR8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.82■■■■□ 3.65
Trim34bJ3QNR8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37.76■■■■□ 3.64
Trim34bJ3QNR8 Gm25238-201ENSMUST00000174914 89 ntBASIC37.74■■■■□ 3.63
Trim34bJ3QNR8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
Trim34bJ3QNR8 Psd-208ENSMUST00000224556 2034 ntBASIC37.62■■■■□ 3.61
Trim34bJ3QNR8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.52■■■■□ 3.6
Trim34bJ3QNR8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.14■■■■□ 3.54
Trim34bJ3QNR8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37.04■■■■□ 3.52
Trim34bJ3QNR8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Trim34bJ3QNR8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.85■■■■□ 3.49
Trim34bJ3QNR8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.78■■■■□ 3.48
Trim34bJ3QNR8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
Trim34bJ3QNR8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC36.76■■■■□ 3.48
Trim34bJ3QNR8 Gm27325-201ENSMUST00000175467 74 ntBASIC36.64■■■■□ 3.46
Trim34bJ3QNR8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
Trim34bJ3QNR8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.61■■■■□ 3.45
Trim34bJ3QNR8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Trim34bJ3QNR8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36.54■■■■□ 3.44
Trim34bJ3QNR8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.48■■■■□ 3.43
Trim34bJ3QNR8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36.42■■■■□ 3.42
Trim34bJ3QNR8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
Trim34bJ3QNR8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.18■■■■□ 3.38
Trim34bJ3QNR8 Gm25262-201ENSMUST00000174934 133 ntBASIC36.18■■■■□ 3.38
Trim34bJ3QNR8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.16■■■■□ 3.38
Trim34bJ3QNR8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36.12■■■■□ 3.37
Trim34bJ3QNR8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Trim34bJ3QNR8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Trim34bJ3QNR8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Trim34bJ3QNR8 Rab21-202ENSMUST00000218831 843 ntBASIC35.98■■■■□ 3.35
Trim34bJ3QNR8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.89■■■■□ 3.34
Trim34bJ3QNR8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Trim34bJ3QNR8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
Trim34bJ3QNR8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.77■■■■□ 3.32
Trim34bJ3QNR8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
Trim34bJ3QNR8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Trim34bJ3QNR8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.59■■■■□ 3.29
Trim34bJ3QNR8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Trim34bJ3QNR8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.58■■■■□ 3.29
Trim34bJ3QNR8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
Trim34bJ3QNR8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
Trim34bJ3QNR8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
Trim34bJ3QNR8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
Trim34bJ3QNR8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
Trim34bJ3QNR8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.47■■■■□ 3.27
Trim34bJ3QNR8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Trim34bJ3QNR8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35.46■■■■□ 3.27
Trim34bJ3QNR8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Trim34bJ3QNR8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
Trim34bJ3QNR8 Gm10524-201ENSMUST00000181931 1893 ntBASIC35.39■■■■□ 3.26
Trim34bJ3QNR8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35.38■■■■□ 3.25
Trim34bJ3QNR8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.35■■■■□ 3.25
Trim34bJ3QNR8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Trim34bJ3QNR8 Gm26115-201ENSMUST00000175605 87 ntBASIC35.27■■■■□ 3.24
Trim34bJ3QNR8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Trim34bJ3QNR8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
Trim34bJ3QNR8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Trim34bJ3QNR8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Trim34bJ3QNR8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35.14■■■■□ 3.22
Trim34bJ3QNR8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35.14■■■■□ 3.22
Trim34bJ3QNR8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Trim34bJ3QNR8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35.09■■■■□ 3.21
Trim34bJ3QNR8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.08■■■■□ 3.21
Trim34bJ3QNR8 Gm8109-201ENSMUST00000194076 746 ntBASIC35.07■■■■□ 3.2
Trim34bJ3QNR8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35.05■■■■□ 3.2
Trim34bJ3QNR8 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.01■■■■□ 3.19
Trim34bJ3QNR8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Trim34bJ3QNR8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.95■■■■□ 3.19
Trim34bJ3QNR8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
Trim34bJ3QNR8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.87■■■■□ 3.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms