Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm25239-201ENSMUST00000174915 86 ntBASIC47,84■■■■■ 5,25
Trim34bJ3QNR8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC44,22■■■■■ 4,67
Trim34bJ3QNR8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC43,64■■■■■ 4,58
Trim34bJ3QNR8 Gm15042-201ENSMUST00000120212 883 ntBASIC41,82■■■■■ 4,29
Trim34bJ3QNR8 Gm24109-201ENSMUST00000175489 103 ntBASIC41,42■■■■■ 4,22
Trim34bJ3QNR8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40,95■■■■■ 4,15
Trim34bJ3QNR8 Gm15045-201ENSMUST00000117359 883 ntBASIC40,87■■■■■ 4,13
Trim34bJ3QNR8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40,59■■■■■ 4,09
Trim34bJ3QNR8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC40,38■■■■■ 4,05
Trim34bJ3QNR8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40,29■■■■■ 4,04
Trim34bJ3QNR8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC40,2■■■■■ 4,03
Trim34bJ3QNR8 Gm23366-201ENSMUST00000175022 89 ntBASIC39,97■■■■□ 3,99
Trim34bJ3QNR8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC39,75■■■■□ 3,95
Trim34bJ3QNR8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39,66■■■■□ 3,94
Trim34bJ3QNR8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39,02■■■■□ 3,84
Trim34bJ3QNR8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38,83■■■■□ 3,81
Trim34bJ3QNR8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38,63■■■■□ 3,77
Trim34bJ3QNR8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38,63■■■■□ 3,77
Trim34bJ3QNR8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38,62■■■■□ 3,77
Trim34bJ3QNR8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38,58■■■■□ 3,77
Trim34bJ3QNR8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38,39■■■■□ 3,74
Trim34bJ3QNR8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC38,38■■■■□ 3,73
Trim34bJ3QNR8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC38,24■■■■□ 3,71
Trim34bJ3QNR8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38,12■■■■□ 3,69
Trim34bJ3QNR8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38,07■■■■□ 3,68
Trim34bJ3QNR8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38,05■■■■□ 3,68
Trim34bJ3QNR8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38,05■■■■□ 3,68
Trim34bJ3QNR8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37,99■■■■□ 3,67
Trim34bJ3QNR8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37,9■■■■□ 3,66
Trim34bJ3QNR8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37,89■■■■□ 3,66
Trim34bJ3QNR8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37,83■■■■□ 3,65
Trim34bJ3QNR8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37,82■■■■□ 3,65
Trim34bJ3QNR8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37,76■■■■□ 3,64
Trim34bJ3QNR8 Gm25238-201ENSMUST00000174914 89 ntBASIC37,74■■■■□ 3,63
Trim34bJ3QNR8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37,63■■■■□ 3,61
Trim34bJ3QNR8 Psd-208ENSMUST00000224556 2034 ntBASIC37,62■■■■□ 3,61
Trim34bJ3QNR8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37,52■■■■□ 3,6
Trim34bJ3QNR8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37,14■■■■□ 3,54
Trim34bJ3QNR8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37,04■■■■□ 3,52
Trim34bJ3QNR8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36,94■■■■□ 3,5
Trim34bJ3QNR8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36,85■■■■□ 3,49
Trim34bJ3QNR8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36,78■■■■□ 3,48
Trim34bJ3QNR8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36,77■■■■□ 3,48
Trim34bJ3QNR8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC36,76■■■■□ 3,48
Trim34bJ3QNR8 Gm27325-201ENSMUST00000175467 74 ntBASIC36,64■■■■□ 3,46
Trim34bJ3QNR8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36,63■■■■□ 3,45
Trim34bJ3QNR8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36,61■■■■□ 3,45
Trim34bJ3QNR8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36,58■■■■□ 3,45
Trim34bJ3QNR8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36,54■■■■□ 3,44
Trim34bJ3QNR8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36,48■■■■□ 3,43
Trim34bJ3QNR8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36,42■■■■□ 3,42
Trim34bJ3QNR8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36,2■■■■□ 3,39
Trim34bJ3QNR8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36,18■■■■□ 3,38
Trim34bJ3QNR8 Gm25262-201ENSMUST00000174934 133 ntBASIC36,18■■■■□ 3,38
Trim34bJ3QNR8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36,16■■■■□ 3,38
Trim34bJ3QNR8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36,12■■■■□ 3,37
Trim34bJ3QNR8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36,1■■■■□ 3,37
Trim34bJ3QNR8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36,04■■■■□ 3,36
Trim34bJ3QNR8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36,01■■■■□ 3,36
Trim34bJ3QNR8 Rab21-202ENSMUST00000218831 843 ntBASIC35,98■■■■□ 3,35
Trim34bJ3QNR8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35,89■■■■□ 3,34
Trim34bJ3QNR8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35,8■■■■□ 3,32
Trim34bJ3QNR8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35,78■■■■□ 3,32
Trim34bJ3QNR8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35,77■■■■□ 3,32
Trim34bJ3QNR8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35,69■■■■□ 3,3
Trim34bJ3QNR8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35,61■■■■□ 3,29
Trim34bJ3QNR8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35,59■■■■□ 3,29
Trim34bJ3QNR8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35,59■■■■□ 3,29
Trim34bJ3QNR8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35,58■■■■□ 3,29
Trim34bJ3QNR8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35,55■■■■□ 3,28
Trim34bJ3QNR8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35,54■■■■□ 3,28
Trim34bJ3QNR8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35,54■■■■□ 3,28
Trim34bJ3QNR8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35,51■■■■□ 3,27
Trim34bJ3QNR8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC35,47■■■■□ 3,27
Trim34bJ3QNR8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35,47■■■■□ 3,27
Trim34bJ3QNR8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35,47■■■■□ 3,27
Trim34bJ3QNR8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35,46■■■■□ 3,27
Trim34bJ3QNR8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35,46■■■■□ 3,27
Trim34bJ3QNR8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35,43■■■■□ 3,26
Trim34bJ3QNR8 Gm10524-201ENSMUST00000181931 1893 ntBASIC35,39■■■■□ 3,26
Trim34bJ3QNR8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35,38■■■■□ 3,25
Trim34bJ3QNR8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35,35■■■■□ 3,25
Trim34bJ3QNR8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35,32■■■■□ 3,25
Trim34bJ3QNR8 Gm26115-201ENSMUST00000175605 87 ntBASIC35,27■■■■□ 3,24
Trim34bJ3QNR8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35,24■■■■□ 3,23
Trim34bJ3QNR8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35,21■■■■□ 3,23
Trim34bJ3QNR8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35,2■■■■□ 3,23
Trim34bJ3QNR8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35,19■■■■□ 3,22
Trim34bJ3QNR8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35,14■■■■□ 3,22
Trim34bJ3QNR8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35,14■■■■□ 3,22
Trim34bJ3QNR8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35,09■■■■□ 3,21
Trim34bJ3QNR8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35,09■■■■□ 3,21
Trim34bJ3QNR8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35,08■■■■□ 3,21
Trim34bJ3QNR8 Gm8109-201ENSMUST00000194076 746 ntBASIC35,07■■■■□ 3,2
Trim34bJ3QNR8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35,05■■■■□ 3,2
Trim34bJ3QNR8 Gm42596-201ENSMUST00000196305 1958 ntBASIC35,01■■■■□ 3,19
Trim34bJ3QNR8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34,97■■■■□ 3,19
Trim34bJ3QNR8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34,95■■■■□ 3,19
Trim34bJ3QNR8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34,95■■■■□ 3,18
Trim34bJ3QNR8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34,87■■■■□ 3,17
Retrieved 100 of 76,532 protein–RNA pairs in 43,3 ms