RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Rnf187Q8BFX1 236 aa14.17□□□□□ -0.14
Ldb3-201ENSMUST00000022327 U2af1l4Q8BGJ9 220 aa14.17□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Sil1Q9EPK6 465 aa14.17□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Bin1O08539 588 aaKnown RBP14.17□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Nsfl1cQ9CZ44 370 aaKnown RBP14.17□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Dydc1Q9D9T0 175 aa14.17□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Ddx46Q569Z5 1032 aaKnown RBP14.17□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Cep135Q6P5D4 1140 aa14.17□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Ccdc93Q7TQK5 629 aa14.17□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Znf771Q8BJ90 317 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Cc2d1bQ8BRN9 848 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Tmem132eQ6IEE6 982 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Zranb1Q7M760 708 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Zscan29E9Q5B4 869 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Kmt5bQ3U8K7 883 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Arglu1Q3UL36 271 aaKnown RBP14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Hand2Q61039 217 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Naa15Q80UM3 865 aaKnown RBP14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Calml4Q91WQ9 153 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Smc1bQ920F6 1248 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Smco2Q9DA21 347 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Igf2bp2Q5SF07 592 aaKnown RBP14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Ddx10Q80Y44 875 aaKnown RBP14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Brd3Q8K2F0 726 aaKnown RBP14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Rnf34Q99KR6 376 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Cul5Q9D5V5 780 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Uchl5Q9WUP7 329 aa14.16□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Fbf1A2A870 1173 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Kdm4aQ8BW72 1064 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 WtapQ9ER69 396 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Cdk13Q69ZA1 1511 aaKnown RBP14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Nek11Q8C0Q4 628 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Ces1aE9PYP1 563 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 GmnnO88513 206 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Gm156Q58A37 223 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Amotl2Q8K371 772 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Zbtb43Q9DAI4 467 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Nphp4P59240 1425 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Cbx1P83917 185 aaKnown RBP14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Atp2b3Q0VF55 1220 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Themis2Q91YX0 663 aa14.15□□□□□ -0.14
Ldb3-201ENSMUST00000022327 Ctage5Q8R311 779 aa14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Efcab2Q9CQ46 164 aa14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Gm18336A0A140LIU8 765 aa14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Scaf1Q5U4C3 1256 aaKnown RBP14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Hook3Q8BUK6 718 aa14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ccdc73Q8CDM4 1066 aa14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 AU019823E9PUQ3 292 aa14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Akap2O54931 893 aa14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Lrrc7Q80TE7 1490 aa14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ier5O89113 308 aa14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Gimap8Q75N62 688 aa14.14□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Cnot6lQ8VEG6 555 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Acsbg1Q99PU5 721 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Fam213aQ9CYH2 218 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Dnm1P39053 867 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Snx13Q6PHS6 957 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Pde3aQ9Z0X4 1141 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Atp8b3Q6UQ17 1335 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Prim1P20664 417 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Rapgef3Q8VCC8 918 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Cfap53Q9D439 514 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Pkd2l2Q9JLG4 621 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Sycp2lA0A0M3U1B0 842 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 GnaqP21279 359 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 NsmfQ99NF2 532 aa14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Nip7Q9CXK8 180 aaKnown RBP14.13□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Dennd4bQ3U1Y4 1499 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 RestQ8VIG1 1082 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Arhgef40Q3UPH7 1517 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Abcc2Q8VI47 1543 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Gm45140A0A0N4SUM8 220 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Syt1P46096 421 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Tbc1d5Q80XQ2 815 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Slc14a2Q8R4T9 930 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Rufy3Q9D394 469 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Prrc2bQ7TPM1 1486 aaKnown RBP14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Gng11P61953 73 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ano1Q8BHY3 960 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 BrapQ99MP8 591 aa14.12□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Cetn1P41209 172 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Esyt1Q3U7R1 1092 aaKnown RBP14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Cacna2d4Q5RJF7 1116 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ano2Q8CFW1 1002 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Gm42641I6L9G2 585 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Zc3h12cQ5DTV4 884 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 AtripQ8BMG1 785 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ccdc122Q8BVN0 290 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Krt79Q8VED5 531 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Gnat2P50149 354 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Fam43aQ8BUP8 424 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Bloc1s4Q8VED2 215 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 IncenpQ9WU62 880 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Stk36Q69ZM6 1316 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Zbtb21E9Q444 1094 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Slc1a4O35874 532 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Pdzrn3Q69ZS0 1063 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Tti2Q8BGV4 512 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 Ift74Q8BKE9 600 aa14.11□□□□□ -0.15
Ldb3-201ENSMUST00000022327 DlatQ8BMF4 642 aa14.11□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms