RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Rhox8Q6VSS7 320 aa21.78■■□□□ 1.08
Ldb3-201ENSMUST00000022327 Rpgrip1Q9EPQ2 1331 aa20.18■□□□□ 0.82
Ldb3-201ENSMUST00000022327 NischQ80TM9 1593 aa19.46■□□□□ 0.71
Ldb3-201ENSMUST00000022327 Ccdc136Q3TVA9 1136 aa19.34■□□□□ 0.69
Ldb3-201ENSMUST00000022327 Ehmt2Q9Z148 1263 aaKnown RBP19.34■□□□□ 0.69
Ldb3-201ENSMUST00000022327 Esf1Q3V1V3 845 aaKnown RBP19.19■□□□□ 0.66
Ldb3-201ENSMUST00000022327 Trim41Q5NCC3 630 aa19.18■□□□□ 0.66
Ldb3-201ENSMUST00000022327 Cngb1E1AZ71 1325 aa19.16■□□□□ 0.66
Ldb3-201ENSMUST00000022327 Las1lA2BE28 776 aaKnown RBP19.11■□□□□ 0.65
Ldb3-201ENSMUST00000022327 Wdr66E9Q743 1299 aa18.91■□□□□ 0.62
Ldb3-201ENSMUST00000022327 Gab3Q8BSM5 595 aa18.88■□□□□ 0.61
Ldb3-201ENSMUST00000022327 Npm2Q80W85 207 aa18.77■□□□□ 0.6
Ldb3-201ENSMUST00000022327 Zeb1Q64318 1117 aa18.74■□□□□ 0.59
Ldb3-201ENSMUST00000022327 Ube2uB1AUC4 352 aa18.69■□□□□ 0.58
Ldb3-201ENSMUST00000022327 Acin1Q9JIX8 1338 aaKnown RBP18.64■□□□□ 0.58
Ldb3-201ENSMUST00000022327 Pelp1Q9DBD5 1123 aaKnown RBP18.64■□□□□ 0.57
Ldb3-201ENSMUST00000022327 Ccdc180J3QNE4 1664 aa18.59■□□□□ 0.57
Ldb3-201ENSMUST00000022327 Myt1lP97500 1187 aa18.57■□□□□ 0.56
Ldb3-201ENSMUST00000022327 NefmP08553 848 aa18.54■□□□□ 0.56
Ldb3-201ENSMUST00000022327 HrcG5E8J6 738 aa18.51■□□□□ 0.55
Ldb3-201ENSMUST00000022327 Rtl1Q7M732 1744 aa18.44■□□□□ 0.54
Ldb3-201ENSMUST00000022327 UbtfP25976 765 aaKnown RBP18.26■□□□□ 0.51
Ldb3-201ENSMUST00000022327 Stra8P70278 393 aa18.22■□□□□ 0.51
Ldb3-201ENSMUST00000022327 Abcc9P70170 1546 aa18.19■□□□□ 0.5
Ldb3-201ENSMUST00000022327 CenpbP27790 599 aa18.18■□□□□ 0.5
Ldb3-201ENSMUST00000022327 Zcchc6Q5BLK4 1491 aaKnown RBP18.02■□□□□ 0.48
Ldb3-201ENSMUST00000022327 Il27Q8K3I6 234 aa17.91■□□□□ 0.46
Ldb3-201ENSMUST00000022327 Cdk11bP24788 784 aaKnown RBP17.89■□□□□ 0.46
Ldb3-201ENSMUST00000022327 Pcgf6Q99NA9 353 aa17.87■□□□□ 0.45
Ldb3-201ENSMUST00000022327 Slc24a1Q91WD8 1130 aa17.77■□□□□ 0.44
Ldb3-201ENSMUST00000022327 Abcc8B2RUS7 1588 aa17.75■□□□□ 0.43
Ldb3-201ENSMUST00000022327 Tnnt3Q9QZ47 272 aa17.74■□□□□ 0.43
Ldb3-201ENSMUST00000022327 Fam50aQ9WV03 339 aaKnown RBP17.69■□□□□ 0.42
Ldb3-201ENSMUST00000022327 Nop58Q6DFW4 536 aaKnown RBP17.68■□□□□ 0.42
Ldb3-201ENSMUST00000022327 Anp32bQ9EST5 272 aaKnown RBP17.67■□□□□ 0.42
Ldb3-201ENSMUST00000022327 NclP09405 707 aaKnown RBP17.64■□□□□ 0.41
Ldb3-201ENSMUST00000022327 NrdcQ8BHG1 1161 aa17.64■□□□□ 0.41
Ldb3-201ENSMUST00000022327 Ap3b1Q9Z1T1 1105 aa17.62■□□□□ 0.41
Ldb3-201ENSMUST00000022327 Myt1Q8CFC2 1127 aa17.61■□□□□ 0.41
Ldb3-201ENSMUST00000022327 TonslQ6NZL6 1363 aa17.61■□□□□ 0.41
Ldb3-201ENSMUST00000022327 Gm35339A0A140LHH9 1649 aa17.59■□□□□ 0.41
Ldb3-201ENSMUST00000022327 Amer1Q7TS75 1132 aa17.55■□□□□ 0.4
Ldb3-201ENSMUST00000022327 Mier1Q5UAK0 511 aa17.51■□□□□ 0.39
Ldb3-201ENSMUST00000022327 Supt5hO55201 1082 aaKnown RBP17.51■□□□□ 0.39
Ldb3-201ENSMUST00000022327 Neurod1Q60867 357 aa17.47■□□□□ 0.39
Ldb3-201ENSMUST00000022327 NeflP08551 543 aa17.44■□□□□ 0.38
Ldb3-201ENSMUST00000022327 Npm1Q61937 292 aaKnown RBP17.35■□□□□ 0.37
Ldb3-201ENSMUST00000022327 Brd4Q9ESU6 1400 aaKnown RBP17.35■□□□□ 0.37
Ldb3-201ENSMUST00000022327 Os9Q8K2C7 672 aa17.32■□□□□ 0.36
Ldb3-201ENSMUST00000022327 ClspnQ80YR7 1315 aa17.31■□□□□ 0.36
Ldb3-201ENSMUST00000022327 Ppargc1bQ8VHJ7 1014 aa17.3■□□□□ 0.36
Ldb3-201ENSMUST00000022327 Eif5bQ05D44 1216 aaKnown RBP17.3■□□□□ 0.36
Ldb3-201ENSMUST00000022327 Cep164Q5DU05 1446 aa17.27■□□□□ 0.36
Ldb3-201ENSMUST00000022327 Dcaf1Q80TR8 1506 aa17.27■□□□□ 0.36
Ldb3-201ENSMUST00000022327 Rtl5Q5DTT4 599 aa17.26■□□□□ 0.35
Ldb3-201ENSMUST00000022327 Plekhg3Q4VAC9 1341 aa17.23■□□□□ 0.35
Ldb3-201ENSMUST00000022327 Lmod2Q3UHZ5 550 aa17.19■□□□□ 0.34
Ldb3-201ENSMUST00000022327 4933416C03RikQ3V063 378 aa17.19■□□□□ 0.34
Ldb3-201ENSMUST00000022327 Rb1cc1Q9ESK9 1588 aa17.12■□□□□ 0.33
Ldb3-201ENSMUST00000022327 Clip1Q922J3 1391 aa17.11■□□□□ 0.33
Ldb3-201ENSMUST00000022327 Ttbk1Q6PCN3 1308 aa17.1■□□□□ 0.33
Ldb3-201ENSMUST00000022327 Ccer2J3QPU5 274 aa17.07■□□□□ 0.32
Ldb3-201ENSMUST00000022327 Chic1Q8CBW7 227 aa17.05■□□□□ 0.32
Ldb3-201ENSMUST00000022327 4930567H17RikQ3V0K5 233 aa17.02■□□□□ 0.31
Ldb3-201ENSMUST00000022327 Hdac5Q9Z2V6 1113 aa17.01■□□□□ 0.31
Ldb3-201ENSMUST00000022327 Anp32aO35381 247 aa17.01■□□□□ 0.31
Ldb3-201ENSMUST00000022327 Hnrnpul2Q00PI9 745 aaKnown RBP16.95■□□□□ 0.3
Ldb3-201ENSMUST00000022327 Zbtb7cQ8VCZ7 619 aa16.92■□□□□ 0.3
Ldb3-201ENSMUST00000022327 Sall2Q9QX96 1004 aa16.91■□□□□ 0.3
Ldb3-201ENSMUST00000022327 Anks4bQ8K3X6 423 aa16.91■□□□□ 0.3
Ldb3-201ENSMUST00000022327 Eid3Q3V124 375 aa16.9■□□□□ 0.3
Ldb3-201ENSMUST00000022327 NacadQ5SWP3 1504 aa16.87■□□□□ 0.29
Ldb3-201ENSMUST00000022327 Nlrp6Q91WS2 869 aa16.8■□□□□ 0.28
Ldb3-201ENSMUST00000022327 Baz1aO88379 1555 aa16.78■□□□□ 0.28
Ldb3-201ENSMUST00000022327 Ubl4bQ9CQ84 188 aa16.76■□□□□ 0.27
Ldb3-201ENSMUST00000022327 Gm13697A2AK42 830 aa16.76■□□□□ 0.27
Ldb3-201ENSMUST00000022327 Erich6D3Z6S9 713 aa16.75■□□□□ 0.27
Ldb3-201ENSMUST00000022327 Mapk8ip2Q9ERE9 830 aa16.74■□□□□ 0.27
Ldb3-201ENSMUST00000022327 Aplp2Q06335 707 aa16.74■□□□□ 0.27
Ldb3-201ENSMUST00000022327 Golga3P55937 1487 aa16.72■□□□□ 0.27
Ldb3-201ENSMUST00000022327 BlmO88700 1416 aa16.71■□□□□ 0.27
Ldb3-201ENSMUST00000022327 Upf2A2AT37 1269 aaKnown RBP16.7■□□□□ 0.26
Ldb3-201ENSMUST00000022327 Zbtb4Q5F293 982 aa16.69■□□□□ 0.26
Ldb3-201ENSMUST00000022327 Ifnlr1Q8CGK5 535 aa16.67■□□□□ 0.26
Ldb3-201ENSMUST00000022327 Clstn2Q9ER65 966 aa16.66■□□□□ 0.26
Ldb3-201ENSMUST00000022327 Setd5Q5XJV7 1441 aa16.66■□□□□ 0.26
Ldb3-201ENSMUST00000022327 DaxxO35613 739 aa16.64■□□□□ 0.25
Ldb3-201ENSMUST00000022327 Atp1b4Q99ME6 356 aa16.64■□□□□ 0.25
Ldb3-201ENSMUST00000022327 Fkbp15Q6P9Q6 1216 aaKnown RBP16.64■□□□□ 0.25
Ldb3-201ENSMUST00000022327 Calr4Q3TQS0 420 aa16.62■□□□□ 0.25
Ldb3-201ENSMUST00000022327 Csrnp3P59055 597 aa16.62■□□□□ 0.25
Ldb3-201ENSMUST00000022327 Chic2Q9D9G3 165 aa16.59■□□□□ 0.25
Ldb3-201ENSMUST00000022327 Rsf1E9PWW9 1441 aaKnown RBP16.57■□□□□ 0.24
Ldb3-201ENSMUST00000022327 Polr3glQ8R0C0 218 aa16.55■□□□□ 0.24
Ldb3-201ENSMUST00000022327 Mrs2Q5NCE8 434 aa16.54■□□□□ 0.24
Ldb3-201ENSMUST00000022327 Eea1Q8BL66 1411 aa16.51■□□□□ 0.23
Ldb3-201ENSMUST00000022327 Gm13695A2AK44 830 aa16.5■□□□□ 0.23
Ldb3-201ENSMUST00000022327 Prdm10Q3UTQ7 1184 aa16.5■□□□□ 0.23
Ldb3-201ENSMUST00000022327 Kif15Q6P9L6 1387 aa16.49■□□□□ 0.23
Ldb3-201ENSMUST00000022327 Ppp4r2Q0VGB7 417 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 108.8 ms