Protein–RNA interactions for Protein: Q8CDM4

Ccdc73, Coiled-coil domain-containing protein 73, mousemouse

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc73Q8CDM4 Gm25239-201ENSMUST00000174915 86 ntBASIC40.34■■■■■ 4.05
Ccdc73Q8CDM4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
Ccdc73Q8CDM4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Ccdc73Q8CDM4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Ccdc73Q8CDM4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.25■■■■□ 3.23
Ccdc73Q8CDM4 Gm15042-201ENSMUST00000120212 883 ntBASIC35.21■■■■□ 3.23
Ccdc73Q8CDM4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Ccdc73Q8CDM4 Gm24109-201ENSMUST00000175489 103 ntBASIC34.97■■■■□ 3.19
Ccdc73Q8CDM4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Ccdc73Q8CDM4 Psd-208ENSMUST00000224556 2034 ntBASIC34.48■■■■□ 3.11
Ccdc73Q8CDM4 Gm15045-201ENSMUST00000117359 883 ntBASIC34.4■■■■□ 3.1
Ccdc73Q8CDM4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Ccdc73Q8CDM4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Ccdc73Q8CDM4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.04
Ccdc73Q8CDM4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
Ccdc73Q8CDM4 Gm23366-201ENSMUST00000175022 89 ntBASIC33.71■■■□□ 2.99
Ccdc73Q8CDM4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Ccdc73Q8CDM4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Ccdc73Q8CDM4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ccdc73Q8CDM4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ccdc73Q8CDM4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ccdc73Q8CDM4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Ccdc73Q8CDM4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Ccdc73Q8CDM4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ccdc73Q8CDM4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.62■■■□□ 2.81
Ccdc73Q8CDM4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ccdc73Q8CDM4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Ccdc73Q8CDM4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ccdc73Q8CDM4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.39■■■□□ 2.78
Ccdc73Q8CDM4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc73Q8CDM4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc73Q8CDM4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.32■■■□□ 2.76
Ccdc73Q8CDM4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.32■■■□□ 2.76
Ccdc73Q8CDM4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Ccdc73Q8CDM4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Ccdc73Q8CDM4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ccdc73Q8CDM4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Ccdc73Q8CDM4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc73Q8CDM4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc73Q8CDM4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc73Q8CDM4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ccdc73Q8CDM4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.89■■■□□ 2.7
Ccdc73Q8CDM4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc73Q8CDM4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ccdc73Q8CDM4 Gm25238-201ENSMUST00000174914 89 ntBASIC31.84■■■□□ 2.69
Ccdc73Q8CDM4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ccdc73Q8CDM4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ccdc73Q8CDM4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.71■■■□□ 2.67
Ccdc73Q8CDM4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc73Q8CDM4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Ccdc73Q8CDM4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ccdc73Q8CDM4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
Ccdc73Q8CDM4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc73Q8CDM4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.27■■■□□ 2.6
Ccdc73Q8CDM4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.19■■■□□ 2.58
Ccdc73Q8CDM4 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.16■■■□□ 2.58
Ccdc73Q8CDM4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.14■■■□□ 2.58
Ccdc73Q8CDM4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc73Q8CDM4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc73Q8CDM4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc73Q8CDM4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.07■■■□□ 2.56
Ccdc73Q8CDM4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc73Q8CDM4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc73Q8CDM4 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.94■■■□□ 2.54
Ccdc73Q8CDM4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.92■■■□□ 2.54
Ccdc73Q8CDM4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
Ccdc73Q8CDM4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ccdc73Q8CDM4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ccdc73Q8CDM4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc73Q8CDM4 Gm27325-201ENSMUST00000175467 74 ntBASIC30.84■■■□□ 2.53
Ccdc73Q8CDM4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc73Q8CDM4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc73Q8CDM4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.7■■■□□ 2.51
Ccdc73Q8CDM4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.69■■■□□ 2.5
Ccdc73Q8CDM4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ccdc73Q8CDM4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
Ccdc73Q8CDM4 Gm25262-201ENSMUST00000174934 133 ntBASIC30.58■■■□□ 2.49
Ccdc73Q8CDM4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc73Q8CDM4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc73Q8CDM4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc73Q8CDM4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc73Q8CDM4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc73Q8CDM4 Rab21-202ENSMUST00000218831 843 ntBASIC30.35■■■□□ 2.45
Ccdc73Q8CDM4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.33■■■□□ 2.45
Ccdc73Q8CDM4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc73Q8CDM4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.26■■■□□ 2.43
Ccdc73Q8CDM4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc73Q8CDM4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.14■■■□□ 2.42
Ccdc73Q8CDM4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ccdc73Q8CDM4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc73Q8CDM4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc73Q8CDM4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc73Q8CDM4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.99■■■□□ 2.39
Ccdc73Q8CDM4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
Ccdc73Q8CDM4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ccdc73Q8CDM4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.98■■■□□ 2.39
Ccdc73Q8CDM4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Ccdc73Q8CDM4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.94■■■□□ 2.38
Ccdc73Q8CDM4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Ccdc73Q8CDM4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms