RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W GYP7P48365 746 aa4.08□□□□□ -1.76
SRL1YOR247W ALO1P54783 526 aaKnown RBP4.08□□□□□ -1.76
SRL1YOR247W UME1Q03010 460 aa4.08□□□□□ -1.76
SRL1YOR247W YDR514CQ04408 483 aa4.08□□□□□ -1.76
SRL1YOR247W COG8Q04632 607 aa4.08□□□□□ -1.76
SRL1YOR247W HRQ1Q05549 1077 aa4.08□□□□□ -1.76
SRL1YOR247W RSB1Q08417 382 aa4.08□□□□□ -1.76
SRL1YOR247W FAP7Q12055 197 aaPredicted RBP4.08□□□□□ -1.76
SRL1YOR247W SRO9P25567 434 aaKnown RBP4.07□□□□□ -1.76
SRL1YOR247W CDC48P25694 835 aaKnown RBP4.07□□□□□ -1.76
SRL1YOR247W MDL2P33311 773 aa4.07□□□□□ -1.76
SRL1YOR247W STO1P34160 861 aaKnown RBP4.07□□□□□ -1.76
SRL1YOR247W BAP2P38084 609 aa4.07□□□□□ -1.76
SRL1YOR247W YHL012WP38709 493 aa4.07□□□□□ -1.76
SRL1YOR247W RRT14P40470 206 aa4.07□□□□□ -1.76
SRL1YOR247W CIT3P43635 486 aa4.07□□□□□ -1.76
SRL1YOR247W ATG36P46983 293 aa4.07□□□□□ -1.76
SRL1YOR247W YGR130CP53278 816 aa4.07□□□□□ -1.76
SRL1YOR247W YGR283CP53336 341 aaPredicted RBP4.07□□□□□ -1.76
SRL1YOR247W FOL1P53848 824 aa4.07□□□□□ -1.76
SRL1YOR247W BUL2Q03758 920 aaKnown RBP4.07□□□□□ -1.76
SRL1YOR247W HFD1Q04458 532 aa4.07□□□□□ -1.76
SRL1YOR247W CYC7P00045 113 aa4.06□□□□□ -1.76
SRL1YOR247W CDC9P04819 755 aa4.06□□□□□ -1.76
SRL1YOR247W SRD1P09007 221 aa4.06□□□□□ -1.76
SRL1YOR247W SNF5P18480 905 aa4.06□□□□□ -1.76
SRL1YOR247W EMC3P36039 253 aa4.06□□□□□ -1.76
SRL1YOR247W YKL151CP36059 337 aa4.06□□□□□ -1.76
SRL1YOR247W NUG1P40010 520 aaKnown RBP4.06□□□□□ -1.76
SRL1YOR247W MGS1P40151 587 aa4.06□□□□□ -1.76
SRL1YOR247W CAF16P43569 289 aa4.06□□□□□ -1.76
SRL1YOR247W NRD1P53617 575 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
SRL1YOR247W ATP25Q03153 612 aa4.06□□□□□ -1.76
SRL1YOR247W YPR196WQ06595 470 aa4.06□□□□□ -1.76
SRL1YOR247W REH1Q06709 432 aa4.06□□□□□ -1.76
SRL1YOR247W YLR001CQ07895 862 aa4.06□□□□□ -1.76
SRL1YOR247W MDM38Q08179 573 aa4.06□□□□□ -1.76
SRL1YOR247W BI4P03879 638 aa4.05□□□□□ -1.76
SRL1YOR247W RAD18P10862 487 aa4.05□□□□□ -1.76
SRL1YOR247W FUN30P31380 1131 aa4.05□□□□□ -1.76
SRL1YOR247W RPC82P32349 654 aa4.05□□□□□ -1.76
SRL1YOR247W AFR1P33304 620 aa4.05□□□□□ -1.76
SRL1YOR247W MTC2P34246 357 aa4.05□□□□□ -1.76
SRL1YOR247W TYS1P36421 394 aaKnown RBP4.05□□□□□ -1.76
SRL1YOR247W TOS1P38288 455 aa4.05□□□□□ -1.76
SRL1YOR247W YER158CP40095 573 aa4.05□□□□□ -1.76
SRL1YOR247W SEC26P41810 973 aaKnown RBP4.05□□□□□ -1.76
SRL1YOR247W RSC3Q06639 885 aa4.05□□□□□ -1.76
SRL1YOR247W YOL057WQ08225 711 aa4.05□□□□□ -1.76
SRL1YOR247W OSW2Q12202 724 aa4.05□□□□□ -1.76
SRL1YOR247W YVC1Q12324 675 aa4.05□□□□□ -1.76
SRL1YOR247W TMA17Q12513 150 aa4.05□□□□□ -1.76
SRL1YOR247W TRP3P00937 484 aa4.04□□□□□ -1.76
SRL1YOR247W MPH2P0CD99 609 aa4.04□□□□□ -1.76
SRL1YOR247W SFL1P20134 766 aa4.04□□□□□ -1.76
SRL1YOR247W RFA1P22336 621 aaKnown RBP4.04□□□□□ -1.76
SRL1YOR247W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76 RIP-Chip
SRL1YOR247W NPP1P25353 742 aa4.04□□□□□ -1.76
SRL1YOR247W LIP5P32875 414 aa4.04□□□□□ -1.76
SRL1YOR247W YKR073CP36153 106 aa4.04□□□□□ -1.76
SRL1YOR247W YBR238CP38330 731 aaKnown RBP4.04□□□□□ -1.76
SRL1YOR247W TSL1P38427 1098 aaKnown RBP4.04□□□□□ -1.76
SRL1YOR247W RPN10P38886 268 aaKnown RBP4.04□□□□□ -1.76
SRL1YOR247W TPM2P40414 161 aa4.04□□□□□ -1.76
SRL1YOR247W GYP8P43570 497 aa4.04□□□□□ -1.76
SRL1YOR247W INP52P50942 1183 aa4.04□□□□□ -1.76
SRL1YOR247W SRT1Q03175 343 aa4.04□□□□□ -1.76
SRL1YOR247W MET7Q08645 548 aa4.04□□□□□ -1.76
SRL1YOR247W ENV7Q12003 364 aa4.04□□□□□ -1.76
SRL1YOR247W ACE2P21192 770 aa4.03□□□□□ -1.76
SRL1YOR247W PCL2P25693 308 aa4.03□□□□□ -1.76
SRL1YOR247W PUB1P32588 453 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76 RIP-Chip
SRL1YOR247W YFL054CP43549 646 aa4.03□□□□□ -1.76
SRL1YOR247W MET13P53128 600 aa4.03□□□□□ -1.76
SRL1YOR247W NOG2P53742 486 aaKnown RBP4.03□□□□□ -1.76
SRL1YOR247W RCM1P53972 490 aa4.03□□□□□ -1.76
SRL1YOR247W SNP1Q00916 300 aaPredicted RBP4.03□□□□□ -1.76
SRL1YOR247W VPS30Q02948 557 aa4.03□□□□□ -1.76
SRL1YOR247W EAR1Q03212 550 aa4.03□□□□□ -1.76
SRL1YOR247W GUD1Q07729 489 aa4.03□□□□□ -1.76
SRL1YOR247W RSC58Q07979 502 aa4.03□□□□□ -1.76
SRL1YOR247W TRE2Q08693 809 aa4.03□□□□□ -1.76
SRL1YOR247W SVS1Q12254 260 aa4.03□□□□□ -1.76
SRL1YOR247W TMA7Q3E764 64 aaKnown RBP4.03□□□□□ -1.76
SRL1YOR247W SAM35P14693 329 aa4.02□□□□□ -1.77
SRL1YOR247W HOG1P32485 435 aa4.02□□□□□ -1.77
SRL1YOR247W WHI3P34761 661 aaKnown RBP4.02□□□□□ -1.77
SRL1YOR247W ERT1P38140 529 aa4.02□□□□□ -1.77
SRL1YOR247W GIC1P38785 314 aa4.02□□□□□ -1.77
SRL1YOR247W CKB2P38930 258 aa4.02□□□□□ -1.77
SRL1YOR247W DOT6P40059 670 aaKnown RBP4.02□□□□□ -1.77
SRL1YOR247W NIT1P40447 199 aa4.02□□□□□ -1.77
SRL1YOR247W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SRL1YOR247W YKE2P52553 114 aa4.02□□□□□ -1.77
SRL1YOR247W MTC3P53077 123 aa4.02□□□□□ -1.77
SRL1YOR247W MTQ2Q03920 221 aaPredicted RBP4.02□□□□□ -1.77
SRL1YOR247W RCL1Q08096 367 aaPredicted RBP4.02□□□□□ -1.77
SRL1YOR247W GIN4Q12263 1142 aa4.02□□□□□ -1.77
SRL1YOR247W PRP19P32523 503 aaKnown RBP4.01□□□□□ -1.77
SRL1YOR247W MCD4P36051 919 aa4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms