RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeastyeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIR4YOR009W DED1P06634 604 aaKnown RBP13.28□□□□□ -0.28
TIR4YOR009W DBP5P20449 482 aaKnown RBP13.28□□□□□ -0.28
TIR4YOR009W RPC53P25441 422 aa13.28□□□□□ -0.28
TIR4YOR009W YSC83P32792 385 aa13.28□□□□□ -0.28
TIR4YOR009W VPS53P47061 822 aa13.28□□□□□ -0.28
TIR4YOR009W AVT1P47082 602 aa13.28□□□□□ -0.28
TIR4YOR009W ROD1Q02805 837 aa13.28□□□□□ -0.28
TIR4YOR009W MRF1P30775 413 aaPredicted RBP13.27□□□□□ -0.29
TIR4YOR009W YEL025CP39991 1188 aa13.27□□□□□ -0.29
TIR4YOR009W CCM1P48237 864 aaPredicted RBP13.27□□□□□ -0.29
TIR4YOR009W GPI13Q07830 1017 aa13.27□□□□□ -0.29
TIR4YOR009W PHO8P11491 566 aa13.26□□□□□ -0.29
TIR4YOR009W PRE10P21242 288 aaKnown RBP RIP-Chip data13.26□□□□□ -0.29not detected
TIR4YOR009W VFA1P40080 203 aa13.26□□□□□ -0.29
TIR4YOR009W VID30P53076 958 aa13.26□□□□□ -0.29
TIR4YOR009W CAF130P53280 1122 aaPredicted RBP13.26□□□□□ -0.29
TIR4YOR009W NOC3Q07896 663 aaPredicted RBP13.26□□□□□ -0.29
TIR4YOR009W HMI1Q12039 706 aa13.26□□□□□ -0.29
TIR4YOR009W FLR1P38124 548 aa13.25□□□□□ -0.29
TIR4YOR009W PCH2P38126 564 aa13.25□□□□□ -0.29
TIR4YOR009W UBP13P38187 747 aa13.25□□□□□ -0.29
TIR4YOR009W LCB2P40970 561 aa13.25□□□□□ -0.29
TIR4YOR009W OSW7P43611 510 aa13.25□□□□□ -0.29
TIR4YOR009W TAM41P53230 385 aa13.25□□□□□ -0.29
TIR4YOR009W COQ9Q05779 260 aa13.25□□□□□ -0.29
TIR4YOR009W SMC5Q08204 1093 aa13.25□□□□□ -0.29
TIR4YOR009W FAL1Q12099 399 aaKnown RBP13.25□□□□□ -0.29
TIR4YOR009W ATG9Q12142 997 aa13.25□□□□□ -0.29
TIR4YOR009W YLL058WQ12198 575 aa13.25□□□□□ -0.29
TIR4YOR009W SSB1P11484 613 aaKnown RBP13.24□□□□□ -0.29
TIR4YOR009W ATG19P35193 415 aa13.24□□□□□ -0.29
TIR4YOR009W MXR1P40029 184 aa13.24□□□□□ -0.29
TIR4YOR009W SSB2P40150 613 aaKnown RBP13.24□□□□□ -0.29
TIR4YOR009W UME1Q03010 460 aa13.24□□□□□ -0.29
TIR4YOR009W YLR287CQ05881 355 aa13.24□□□□□ -0.29
TIR4YOR009W YCG1Q06680 1035 aa13.24□□□□□ -0.29
TIR4YOR009W MET7Q08645 548 aa13.24□□□□□ -0.29
TIR4YOR009W RRP6Q12149 733 aaKnown RBP13.24□□□□□ -0.29
TIR4YOR009W KIN82P25341 720 aa13.23□□□□□ -0.29
TIR4YOR009W RRP43P25359 394 aaPredicted RBP13.23□□□□□ -0.29
TIR4YOR009W APL1P27351 700 aa13.23□□□□□ -0.29
TIR4YOR009W SPC110P32380 944 aa13.23□□□□□ -0.29
TIR4YOR009W MNN4P36044 1178 aa13.23□□□□□ -0.29
TIR4YOR009W EFM2P38347 419 aa13.23□□□□□ -0.29
TIR4YOR009W POX1P13711 748 aa13.23□□□□□ -0.29
TIR4YOR009W IRE1P32361 1115 aa13.23□□□□□ -0.29
TIR4YOR009W ATG3P40344 310 aa13.23□□□□□ -0.29
TIR4YOR009W STU2P46675 888 aa13.23□□□□□ -0.29
TIR4YOR009W SPO12P17123 173 aa13.22□□□□□ -0.29
TIR4YOR009W NAM7P30771 971 aaKnown RBP13.22□□□□□ -0.29
TIR4YOR009W COT1P32798 439 aa13.22□□□□□ -0.29
TIR4YOR009W ERG5P54781 538 aa13.22□□□□□ -0.29
TIR4YOR009W MAS2P11914 482 aa13.21□□□□□ -0.3
TIR4YOR009W TUP1P16649 713 aa13.21□□□□□ -0.3
TIR4YOR009W EAF5P39995 279 aa13.21□□□□□ -0.3
TIR4YOR009W MDR1P53258 950 aa13.21□□□□□ -0.3
TIR4YOR009W RTT102P53330 157 aa13.21□□□□□ -0.3
TIR4YOR009W MLH2Q07980 695 aa13.21□□□□□ -0.3
TIR4YOR009W PPR1P07272 904 aaPredicted RBP13.2□□□□□ -0.3
TIR4YOR009W EFT1P32324 842 aaKnown RBP13.2□□□□□ -0.3
TIR4YOR009W SHQ1P40486 507 aaPredicted RBP13.2□□□□□ -0.3
TIR4YOR009W IES1P43579 692 aa13.2□□□□□ -0.3
TIR4YOR009W PSP2P50109 593 aaKnown RBP13.2□□□□□ -0.3
TIR4YOR009W TAD1P53065 400 aa13.2□□□□□ -0.3
TIR4YOR009W TIM8P57744 87 aa13.2□□□□□ -0.3
TIR4YOR009W VPS38Q05919 439 aa13.2□□□□□ -0.3
TIR4YOR009W ESC2Q06340 456 aa13.2□□□□□ -0.3
TIR4YOR009W IES4Q08561 116 aa13.2□□□□□ -0.3
TIR4YOR009W CDC53Q12018 815 aaKnown RBP13.2□□□□□ -0.3
TIR4YOR009W SSD1P24276 1250 aaKnown RBP RIP-Chip data13.19□□□□□ -0.3not detected
TIR4YOR009W XRS2P33301 854 aa13.19□□□□□ -0.3
TIR4YOR009W KTR2P33550 425 aa13.19□□□□□ -0.3
TIR4YOR009W KSP1P38691 1029 aaKnown RBP13.19□□□□□ -0.3
TIR4YOR009W FIG4P42837 879 aa13.19□□□□□ -0.3
TIR4YOR009W JSN1P47135 1091 aaKnown RBP RIP-Chip data13.19□□□□□ -0.3not detected
TIR4YOR009W DUS1P53759 423 aaKnown RBP13.19□□□□□ -0.3
TIR4YOR009W GIR2Q03768 265 aaPredicted RBP13.19□□□□□ -0.3
TIR4YOR009W RLP24Q07915 199 aaKnown RBP13.19□□□□□ -0.3
TIR4YOR009W CHS2P14180 963 aa13.18□□□□□ -0.3
TIR4YOR009W TIM23P32897 222 aa13.18□□□□□ -0.3
TIR4YOR009W YKL023WP36103 277 aaKnown RBP13.18□□□□□ -0.3
TIR4YOR009W CCC2P38995 1004 aa13.18□□□□□ -0.3
TIR4YOR009W YNL146WP53906 100 aa13.18□□□□□ -0.3
TIR4YOR009W DON1Q05610 365 aa13.18□□□□□ -0.3
TIR4YOR009W NEW1Q08972 1196 aaKnown RBP13.18□□□□□ -0.3
TIR4YOR009W ICL2Q12031 575 aa13.18□□□□□ -0.3
TIR4YOR009W SRF1Q12516 437 aa13.18□□□□□ -0.3
TIR4YOR009W RME1P32338 300 aaKnown RBP13.17□□□□□ -0.3
TIR4YOR009W MUD1P32605 298 aaKnown RBP13.17□□□□□ -0.3
TIR4YOR009W BCS1P32839 456 aa13.17□□□□□ -0.3
TIR4YOR009W BRE5P53741 515 aaKnown RBP13.17□□□□□ -0.3
TIR4YOR009W ALF1P53904 254 aa13.17□□□□□ -0.3
TIR4YOR009W VTC3Q02725 835 aa13.17□□□□□ -0.3
TIR4YOR009W PLP2Q12017 286 aa13.17□□□□□ -0.3
TIR4YOR009W YOL098CQ12496 1037 aa13.17□□□□□ -0.3
TIR4YOR009W PDC6P26263 563 aaKnown RBP13.16□□□□□ -0.3
TIR4YOR009W VPS35P34110 944 aa13.16□□□□□ -0.3
TIR4YOR009W SEC9P40357 651 aa13.16□□□□□ -0.3
TIR4YOR009W SAD1P43589 448 aa13.16□□□□□ -0.3
TIR4YOR009W PRY3P47033 881 aa13.16□□□□□ -0.3
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms