RNA–Protein interactions for RNA: YNL148C

ALF1, Transcript of Alpha-tubulin folding protein, yeast

Gene ALF1, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ALF1	YNL148C	SMC5	Q08204	1093 aa		13.68	□□□□□ -0.22
ALF1	YNL148C	SEC23	P15303	768 aa	Known RBP	13.67	□□□□□ -0.22
ALF1	YNL148C	YSC83	P32792	385 aa		13.67	□□□□□ -0.22
ALF1	YNL148C	CAJ1	P39101	391 aa		13.67	□□□□□ -0.22
ALF1	YNL148C	ULP2	P40537	1034 aa	Predicted RBP	13.67	□□□□□ -0.22
ALF1	YNL148C	MDR1	P53258	950 aa		13.67	□□□□□ -0.22
ALF1	YNL148C	HOS3	Q02959	697 aa	Known RBP	13.67	□□□□□ -0.22
ALF1	YNL148C	CWC2	Q12046	339 aa	Predicted RBP	13.67	□□□□□ -0.22
ALF1	YNL148C	SWI6	P09959	803 aa		13.66	□□□□□ -0.22
ALF1	YNL148C	DAL7	P21826	554 aa		13.66	□□□□□ -0.22
ALF1	YNL148C	TRK2	P28584	889 aa		13.66	□□□□□ -0.22
ALF1	YNL148C	TFC4	P33339	1025 aa		13.66	□□□□□ -0.22
ALF1	YNL148C	IXR1	P33417	597 aa		13.66	□□□□□ -0.22
ALF1	YNL148C	APE3	P37302	537 aa	Known RBP	13.66	□□□□□ -0.22
ALF1	YNL148C	UBP5	P39944	805 aa		13.66	□□□□□ -0.22
ALF1	YNL148C	FIG4	P42837	879 aa		13.66	□□□□□ -0.22
ALF1	YNL148C	OSW7	P43611	510 aa		13.66	□□□□□ -0.22
ALF1	YNL148C	SLD5	Q03406	294 aa		13.66	□□□□□ -0.22
ALF1	YNL148C	OPY2	Q06810	360 aa		13.66	□□□□□ -0.22
ALF1	YNL148C	RLP24	Q07915	199 aa	Known RBP	13.66	□□□□□ -0.22
ALF1	YNL148C	PET111	P08468	800 aa		13.65	□□□□□ -0.22
ALF1	YNL148C	KTR2	P33550	425 aa		13.65	□□□□□ -0.22
ALF1	YNL148C	PCH2	P38126	564 aa		13.65	□□□□□ -0.22
ALF1	YNL148C	CAF130	P53280	1122 aa	Predicted RBP	13.65	□□□□□ -0.22
ALF1	YNL148C	ARK1	P53974	638 aa		13.65	□□□□□ -0.22
ALF1	YNL148C	TIM23	P32897	222 aa		13.64	□□□□□ -0.23
ALF1	YNL148C	YEL025C	P39991	1188 aa		13.64	□□□□□ -0.23
ALF1	YNL148C	SHQ1	P40486	507 aa	Predicted RBP	13.64	□□□□□ -0.23
ALF1	YNL148C	SDS3	P40505	327 aa		13.64	□□□□□ -0.23
ALF1	YNL148C	CEP3	P40969	608 aa		13.64	□□□□□ -0.23
ALF1	YNL148C	VPS53	P47061	822 aa		13.64	□□□□□ -0.23
ALF1	YNL148C	CTR1	P49573	406 aa		13.64	□□□□□ -0.23
ALF1	YNL148C	YGL039W	P53183	348 aa	Known RBP	13.64	□□□□□ -0.23
ALF1	YNL148C	UME1	Q03010	460 aa		13.64	□□□□□ -0.23
ALF1	YNL148C	VPS60	Q03390	229 aa		13.64	□□□□□ -0.23
ALF1	YNL148C	YPR078C	Q06813	372 aa		13.64	□□□□□ -0.23
ALF1	YNL148C	RME1	P32338	300 aa	Known RBP	13.63	□□□□□ -0.23
ALF1	YNL148C	COT1	P32798	439 aa		13.63	□□□□□ -0.23
ALF1	YNL148C	ASH1	P34233	588 aa		13.63	□□□□□ -0.23
ALF1	YNL148C	DBP7	P36120	742 aa	Known RBP	13.63	□□□□□ -0.23
ALF1	YNL148C	ATG3	P40344	310 aa		13.63	□□□□□ -0.23
ALF1	YNL148C	APT1	P49435	187 aa	Known RBP	13.63	□□□□□ -0.23
ALF1	YNL148C	ROD1	Q02805	837 aa		13.63	□□□□□ -0.23
ALF1	YNL148C	DON1	Q05610	365 aa		13.63	□□□□□ -0.23
ALF1	YNL148C	DUS4	Q06063	367 aa		13.63	□□□□□ -0.23
ALF1	YNL148C	FAL1	Q12099	399 aa	Known RBP	13.63	□□□□□ -0.23
ALF1	YNL148C	PPR1	P07272	904 aa	Predicted RBP	13.62	□□□□□ -0.23
ALF1	YNL148C	MTF2	P10849	440 aa		13.62	□□□□□ -0.23
ALF1	YNL148C	SPO12	P17123	173 aa		13.62	□□□□□ -0.23
ALF1	YNL148C	RRP43	P25359	394 aa	Predicted RBP	13.62	□□□□□ -0.23
ALF1	YNL148C	CDC48	P25694	835 aa	Known RBP	13.62	□□□□□ -0.23
ALF1	YNL148C	RGT1	P32862	1170 aa		13.62	□□□□□ -0.23
ALF1	YNL148C	MCX1	P38323	520 aa	Predicted RBP	13.62	□□□□□ -0.23
ALF1	YNL148C	CCC2	P38995	1004 aa		13.62	□□□□□ -0.23
ALF1	YNL148C	MXR1	P40029	184 aa		13.62	□□□□□ -0.23
ALF1	YNL148C	NOP58	Q12499	511 aa	Known RBP	13.62	□□□□□ -0.23
ALF1	YNL148C	PET123	P17558	318 aa		13.61	□□□□□ -0.23
ALF1	YNL148C	YEL1	P34225	687 aa		13.61	□□□□□ -0.23
ALF1	YNL148C	YLR297W	Q05899	129 aa		13.61	□□□□□ -0.23
ALF1	YNL148C	YOL098C	Q12496	1037 aa		13.61	□□□□□ -0.23
ALF1	YNL148C	STO1	P34160	861 aa	Known RBP	13.6	□□□□□ -0.23
ALF1	YNL148C	MOT2	P34909	587 aa	Known RBP	13.6	□□□□□ -0.23
ALF1	YNL148C	MLH2	Q07980	695 aa		13.6	□□□□□ -0.23
ALF1	YNL148C	MSC6	Q08818	692 aa	Known RBP	13.6	□□□□□ -0.23
ALF1	YNL148C	TRM11	Q12463	433 aa		13.6	□□□□□ -0.23
ALF1	YNL148C	CHS2	P14180	963 aa		13.59	□□□□□ -0.23
ALF1	YNL148C	PDC6	P26263	563 aa	Known RBP	13.59	□□□□□ -0.23
ALF1	YNL148C	NIP100	P33420	868 aa		13.59	□□□□□ -0.23
ALF1	YNL148C	LCB2	P40970	561 aa		13.59	□□□□□ -0.23
ALF1	YNL148C	SHE10	P53075	577 aa		13.59	□□□□□ -0.23
ALF1	YNL148C	YMR321C	Q04898	105 aa		13.59	□□□□□ -0.23
ALF1	YNL148C	COQ9	Q05779	260 aa		13.59	□□□□□ -0.23
ALF1	YNL148C	TSR1	Q07381	788 aa	Known RBP	13.59	□□□□□ -0.23
ALF1	YNL148C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	13.58	□□□□□ -0.24	not detected
ALF1	YNL148C	UBC1	P21734	215 aa	Known RBP	13.58	□□□□□ -0.24
ALF1	YNL148C	NAM7	P30771	971 aa	Known RBP	13.58	□□□□□ -0.24
ALF1	YNL148C	SRB4	P32569	687 aa		13.58	□□□□□ -0.24
ALF1	YNL148C	EFM4	P40516	257 aa		13.58	□□□□□ -0.24
ALF1	YNL148C	IES1	P43579	692 aa		13.58	□□□□□ -0.24
ALF1	YNL148C	ATG1	P53104	897 aa		13.58	□□□□□ -0.24
ALF1	YNL148C	TIM8	P57744	87 aa		13.58	□□□□□ -0.24
ALF1	YNL148C	NOC3	Q07896	663 aa	Predicted RBP	13.58	□□□□□ -0.24
ALF1	YNL148C	CDC53	Q12018	815 aa	Known RBP	13.58	□□□□□ -0.24
ALF1	YNL148C	DAS2	Q12084	232 aa		13.58	□□□□□ -0.24
ALF1	YNL148C	YLL058W	Q12198	575 aa		13.58	□□□□□ -0.24
ALF1	YNL148C	OSW2	Q12202	724 aa		13.58	□□□□□ -0.24
ALF1	YNL148C	STE11	P23561	717 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	YEL043W	P32618	956 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	XRS2	P33301	854 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	NDC80	P40460	691 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	HXT8	P40886	569 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	TAM41	P53230	385 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	ENV11	P53246	860 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	RTT102	P53330	157 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	ESBP6	P53918	673 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	SML1	Q04964	104 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	CSR1	Q06705	408 aa	Known RBP	13.57	□□□□□ -0.24
ALF1	YNL148C	MET7	Q08645	548 aa		13.57	□□□□□ -0.24
ALF1	YNL148C	DED1	P06634	604 aa	Known RBP	13.56	□□□□□ -0.24
ALF1	YNL148C	EFT1	P32324	842 aa	Known RBP	13.56	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms