RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C HIS5P07172 385 aa5.44□□□□□ -1.54
SUB1YMR039C HSF1P10961 833 aa5.44□□□□□ -1.54
SUB1YMR039C SRP101P32916 621 aa5.44□□□□□ -1.54
SUB1YMR039C GSF2Q04697 403 aaKnown RBP5.44□□□□□ -1.54
SUB1YMR039C CHA4P43634 648 aa5.43□□□□□ -1.54
SUB1YMR039C PSP2P50109 593 aaKnown RBP5.43□□□□□ -1.54
SUB1YMR039C YDR306CQ06640 478 aa5.43□□□□□ -1.54
SUB1YMR039C SSF2Q12153 453 aaPredicted RBP5.43□□□□□ -1.54
SUB1YMR039C SPE1P08432 466 aa5.42□□□□□ -1.54
SUB1YMR039C STE5P32917 917 aa5.42□□□□□ -1.54
SUB1YMR039C YBR238CP38330 731 aaKnown RBP5.42□□□□□ -1.54
SUB1YMR039C TSL1P38427 1098 aaKnown RBP5.42□□□□□ -1.54
SUB1YMR039C CCC2P38995 1004 aa5.42□□□□□ -1.54
SUB1YMR039C SIT1P39980 628 aa5.42□□□□□ -1.54
SUB1YMR039C YER158CP40095 573 aa5.42□□□□□ -1.54
SUB1YMR039C MCM6P53091 1017 aaKnown RBP5.42□□□□□ -1.54
SUB1YMR039C SFB2P53953 876 aa5.42□□□□□ -1.54
SUB1YMR039C PRP9P19736 530 aaKnown RBP5.41□□□□□ -1.54
SUB1YMR039C PPH3P32345 308 aa5.41□□□□□ -1.54
SUB1YMR039C ATG19P35193 415 aa5.41□□□□□ -1.54
SUB1YMR039C TPO2P53283 614 aa5.41□□□□□ -1.54
SUB1YMR039C TUB2P02557 457 aaKnown RBP5.4□□□□□ -1.54
SUB1YMR039C ADE8P04161 214 aa5.4□□□□□ -1.54
SUB1YMR039C DCG1P32460 244 aa5.4□□□□□ -1.54
SUB1YMR039C SCT1P32784 759 aa5.4□□□□□ -1.54
SUB1YMR039C AFR1P33304 620 aa5.4□□□□□ -1.54
SUB1YMR039C YBR184WP38299 523 aa5.4□□□□□ -1.54
SUB1YMR039C PLB1P39105 664 aa5.4□□□□□ -1.54
SUB1YMR039C URM1P40554 99 aaPredicted RBP5.4□□□□□ -1.54
SUB1YMR039C PFD1P46988 109 aa5.4□□□□□ -1.54
SUB1YMR039C YKE2P52553 114 aa5.4□□□□□ -1.54
SUB1YMR039C WRS1Q12109 432 aaKnown RBP5.4□□□□□ -1.54
SUB1YMR039C PMA1P05030 918 aaKnown RBP5.39□□□□□ -1.55
SUB1YMR039C NPP1P25353 742 aa5.39□□□□□ -1.55
SUB1YMR039C HCM1P25364 564 aa5.39□□□□□ -1.55
SUB1YMR039C CDC48P25694 835 aaKnown RBP5.39□□□□□ -1.55
SUB1YMR039C AAR2P32357 355 aaPredicted RBP5.39□□□□□ -1.55
SUB1YMR039C TRM2P33753 639 aa5.39□□□□□ -1.55
SUB1YMR039C NOP7P53261 605 aaKnown RBP5.39□□□□□ -1.55
SUB1YMR039C GRX1P25373 110 aaKnown RBP5.38□□□□□ -1.55
SUB1YMR039C HBS1P32769 611 aaKnown RBP5.38□□□□□ -1.55
SUB1YMR039C IOC3P43596 787 aa5.38□□□□□ -1.55
SUB1YMR039C EXG2P52911 562 aa5.38□□□□□ -1.55
SUB1YMR039C NAN1Q02931 896 aaKnown RBP5.38□□□□□ -1.55
SUB1YMR039C YPR196WQ06595 470 aa5.38□□□□□ -1.55
SUB1YMR039C FMP25Q08023 583 aa5.38□□□□□ -1.55
SUB1YMR039C NTO1Q12311 748 aa5.38□□□□□ -1.55
SUB1YMR039C RAI1P53063 387 aaKnown RBP5.37□□□□□ -1.55
SUB1YMR039C NCS6P53088 359 aa5.37□□□□□ -1.55
SUB1YMR039C BUL2Q03758 920 aaKnown RBP5.37□□□□□ -1.55
SUB1YMR039C URN1Q06525 465 aaKnown RBP5.37□□□□□ -1.55
SUB1YMR039C KCS1Q12494 1050 aa5.37□□□□□ -1.55
SUB1YMR039C PMI40P29952 429 aaKnown RBP5.36□□□□□ -1.55
SUB1YMR039C YRO2P38079 344 aa5.36□□□□□ -1.55
SUB1YMR039C UTP8P53276 713 aaKnown RBP5.36□□□□□ -1.55
SUB1YMR039C CCM1P48237 864 aaPredicted RBP5.35□□□□□ -1.55
SUB1YMR039C PHO23P50947 330 aa5.35□□□□□ -1.55
SUB1YMR039C LCD1Q04377 747 aa5.35□□□□□ -1.55
SUB1YMR039C SPO75Q07798 868 aa5.35□□□□□ -1.55
SUB1YMR039C PUS9Q12069 462 aa5.35□□□□□ -1.55
SUB1YMR039C CDC11P32458 415 aa5.34□□□□□ -1.55
SUB1YMR039C ALR2P43553 858 aa5.34□□□□□ -1.55
SUB1YMR039C WHI4Q07655 649 aaKnown RBP5.34□□□□□ -1.55
SUB1YMR039C NPC2Q12408 173 aa5.34□□□□□ -1.55
SUB1YMR039C NOT3P06102 836 aaKnown RBP5.33□□□□□ -1.56
SUB1YMR039C RPL8BP29453 256 aaKnown RBP5.33□□□□□ -1.56
SUB1YMR039C DEF1P35732 738 aaKnown RBP5.33□□□□□ -1.56
SUB1YMR039C YJL049WP47048 450 aa5.33□□□□□ -1.56
SUB1YMR039C MSE1P48525 536 aa5.33□□□□□ -1.56
SUB1YMR039C ERP6P53198 216 aa5.33□□□□□ -1.56
SUB1YMR039C ENB1Q08299 606 aa5.33□□□□□ -1.56
SUB1YMR039C GUP2Q08929 609 aa5.33□□□□□ -1.56
SUB1YMR039C UPC2Q12151 913 aa5.33□□□□□ -1.56
SUB1YMR039C STE13P33894 931 aa5.32□□□□□ -1.56
SUB1YMR039C TOK1P40310 691 aa5.32□□□□□ -1.56
SUB1YMR039C EAF1Q06337 982 aa5.32□□□□□ -1.56
SUB1YMR039C PFK1P16861 987 aaKnown RBP5.31□□□□□ -1.56
SUB1YMR039C REC104P33323 182 aa5.31□□□□□ -1.56
SUB1YMR039C ERT1P38140 529 aa5.31□□□□□ -1.56
SUB1YMR039C AIM21P40563 679 aa5.31□□□□□ -1.56
SUB1YMR039C VPS30Q02948 557 aa5.31□□□□□ -1.56
SUB1YMR039C PNS1Q12412 539 aa5.31□□□□□ -1.56
SUB1YMR039C OSH2Q12451 1283 aa5.31□□□□□ -1.56
SUB1YMR039C FBP1P09201 348 aa5.3□□□□□ -1.56
SUB1YMR039C RAD4P14736 754 aa5.3□□□□□ -1.56
SUB1YMR039C STE14P32584 239 aa5.3□□□□□ -1.56
SUB1YMR039C SUN4P53616 420 aa5.3□□□□□ -1.56
SUB1YMR039C UBX5Q06682 500 aa5.3□□□□□ -1.56
SUB1YMR039C YPR071WQ12346 211 aa5.3□□□□□ -1.56
SUB1YMR039C HSP60P19882 572 aaKnown RBP5.29□□□□□ -1.56
SUB1YMR039C SED4P25365 1065 aa5.29□□□□□ -1.56
SUB1YMR039C KAR4P25583 335 aa5.29□□□□□ -1.56
SUB1YMR039C PET10P36139 283 aa5.29□□□□□ -1.56
SUB1YMR039C MSS4P38994 779 aa5.29□□□□□ -1.56
SUB1YMR039C LAS17Q12446 633 aa5.29□□□□□ -1.56
SUB1YMR039C HBN1Q96VH4 193 aa5.29□□□□□ -1.56
SUB1YMR039C RFA1P22336 621 aaKnown RBP5.28□□□□□ -1.56
SUB1YMR039C ARE1P25628 610 aa5.28□□□□□ -1.56
SUB1YMR039C YBR284WP38150 797 aa5.28□□□□□ -1.56
SUB1YMR039C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms