RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W TOK1P40310 691 aa6.22□□□□□ -1.41
SPO20YMR017W RNH70P53331 553 aa6.22□□□□□ -1.41
SPO20YMR017W YLR125WQ12138 136 aa6.22□□□□□ -1.41
SPO20YMR017W YDL177CQ12257 170 aa6.22□□□□□ -1.41
SPO20YMR017W PHO8P11491 566 aa6.21□□□□□ -1.42
SPO20YMR017W PPG1P32838 368 aa6.21□□□□□ -1.42
SPO20YMR017W LRG1P35688 1017 aa6.21□□□□□ -1.42
SPO20YMR017W YAP1801P38856 637 aa6.21□□□□□ -1.42
SPO20YMR017W UBP6P43593 499 aaKnown RBP6.21□□□□□ -1.42
SPO20YMR017W SFB2P53953 876 aa6.21□□□□□ -1.42
SPO20YMR017W SIZ1Q04195 904 aa6.21□□□□□ -1.42
SPO20YMR017W CYC1P00044 109 aaPredicted RBP6.2□□□□□ -1.42
SPO20YMR017W CMP2P14747 604 aa6.2□□□□□ -1.42
SPO20YMR017W CDC48P25694 835 aaKnown RBP6.2□□□□□ -1.42
SPO20YMR017W DOM34P33309 386 aa6.2□□□□□ -1.42
SPO20YMR017W CCM1P48237 864 aaPredicted RBP6.2□□□□□ -1.42
SPO20YMR017W MSC2Q03455 724 aa6.2□□□□□ -1.42
SPO20YMR017W YPR196WQ06595 470 aa6.2□□□□□ -1.42
SPO20YMR017W REC104P33323 182 aa6.19□□□□□ -1.42
SPO20YMR017W NMD2P38798 1089 aaKnown RBP6.19□□□□□ -1.42
SPO20YMR017W ALG12P53730 551 aa6.19□□□□□ -1.42
SPO20YMR017W GAL10P04397 699 aa6.18□□□□□ -1.42
SPO20YMR017W RPC82P32349 654 aa6.18□□□□□ -1.42
SPO20YMR017W RRP14P36080 434 aaKnown RBP6.18□□□□□ -1.42
SPO20YMR017W ECM21P38167 1117 aaKnown RBP6.18□□□□□ -1.42
SPO20YMR017W ECL1P48235 211 aa6.18□□□□□ -1.42
SPO20YMR017W SNO2P53823 222 aa6.18□□□□□ -1.42
SPO20YMR017W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
SPO20YMR017W SRM1P21827 482 aa6.17□□□□□ -1.42
SPO20YMR017W YBR238CP38330 731 aaKnown RBP6.17□□□□□ -1.42
SPO20YMR017W YKE2P52553 114 aa6.17□□□□□ -1.42
SPO20YMR017W GLT1Q12680 2145 aaKnown RBP6.17□□□□□ -1.42
SPO20YMR017W THI4P32318 326 aa6.16□□□□□ -1.42
SPO20YMR017W SRP101P32916 621 aa6.16□□□□□ -1.42
SPO20YMR017W HSV2P50079 448 aaPredicted RBP6.16□□□□□ -1.42
SPO20YMR017W YOR352WQ08816 343 aa6.16□□□□□ -1.42
SPO20YMR017W MET6P05694 767 aaKnown RBP6.15□□□□□ -1.42
SPO20YMR017W GDH3P39708 457 aa6.15□□□□□ -1.42
SPO20YMR017W ZRG8P40021 1076 aa6.15□□□□□ -1.42
SPO20YMR017W ALG2P43636 503 aa6.15□□□□□ -1.42
SPO20YMR017W MRPL22P53881 309 aa6.15□□□□□ -1.42
SPO20YMR017W SGD1Q06132 899 aa6.15□□□□□ -1.42
SPO20YMR017W ENA1P13587 1091 aa6.14□□□□□ -1.43
SPO20YMR017W SEG2P34250 1132 aa6.14□□□□□ -1.43
SPO20YMR017W ENA2Q01896 1091 aa6.14□□□□□ -1.43
SPO20YMR017W ROT1Q03691 256 aa6.14□□□□□ -1.43
SPO20YMR017W POB3Q04636 552 aaKnown RBP6.14□□□□□ -1.43
SPO20YMR017W CDA1Q06702 301 aa6.14□□□□□ -1.43
SPO20YMR017W ENV7Q12003 364 aa6.14□□□□□ -1.43
SPO20YMR017W ENA5Q12691 1091 aa6.14□□□□□ -1.43
SPO20YMR017W MND2P40577 368 aa6.13□□□□□ -1.43
SPO20YMR017W GYP8P43570 497 aa6.13□□□□□ -1.43
SPO20YMR017W MAL11P53048 616 aa6.13□□□□□ -1.43
SPO20YMR017W YGR012WP53206 393 aa6.13□□□□□ -1.43
SPO20YMR017W PLB2Q03674 706 aa6.13□□□□□ -1.43
SPO20YMR017W NOT3P06102 836 aaKnown RBP6.12□□□□□ -1.43
SPO20YMR017W HSF1P10961 833 aa6.12□□□□□ -1.43
SPO20YMR017W GAS1P22146 559 aaKnown RBP6.12□□□□□ -1.43
SPO20YMR017W LAM1P38851 1228 aa6.12□□□□□ -1.43
SPO20YMR017W PHR1P05066 565 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
SPO20YMR017W MPH2P0CD99 609 aa6.11□□□□□ -1.43
SPO20YMR017W RFA1P22336 621 aaKnown RBP6.11□□□□□ -1.43
SPO20YMR017W MSH2P25847 964 aa6.11□□□□□ -1.43
SPO20YMR017W TSA1P34760 196 aaKnown RBP6.11□□□□□ -1.43
SPO20YMR017W EMC3P36039 253 aa6.11□□□□□ -1.43
SPO20YMR017W NIT3P49954 291 aa6.11□□□□□ -1.43
SPO20YMR017W RAI1P53063 387 aaKnown RBP6.11□□□□□ -1.43
SPO20YMR017W GTF1P53260 183 aaPredicted RBP6.11□□□□□ -1.43
SPO20YMR017W YGR283CP53336 341 aaPredicted RBP6.11□□□□□ -1.43
SPO20YMR017W SPC29P33419 253 aa6.1□□□□□ -1.43
SPO20YMR017W PSP2P50109 593 aaKnown RBP6.1□□□□□ -1.43
SPO20YMR017W SPE1P08432 466 aa6.09□□□□□ -1.43
SPO20YMR017W RAD53P22216 821 aa6.09□□□□□ -1.43
SPO20YMR017W PRP43P53131 767 aaKnown RBP6.09□□□□□ -1.43
SPO20YMR017W DAM1P53267 343 aa6.09□□□□□ -1.43
SPO20YMR017W PBP1P53297 722 aaKnown RBP6.09□□□□□ -1.43
SPO20YMR017W CDA2Q06703 312 aa6.09□□□□□ -1.43
SPO20YMR017W URA1P28272 314 aaPredicted RBP6.08□□□□□ -1.44
SPO20YMR017W STE13P33894 931 aa6.08□□□□□ -1.44
SPO20YMR017W POA1P38218 177 aa6.08□□□□□ -1.44
SPO20YMR017W MEF2P39677 819 aa6.08□□□□□ -1.44
SPO20YMR017W NRD1P53617 575 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
SPO20YMR017W GCN5Q03330 439 aa6.08□□□□□ -1.44
SPO20YMR017W YDR132CQ03900 495 aa6.08□□□□□ -1.44
SPO20YMR017W TPO1Q07824 586 aa6.08□□□□□ -1.44
SPO20YMR017W NTG2Q08214 380 aa6.08□□□□□ -1.44
SPO20YMR017W MEF1P25039 761 aa6.07□□□□□ -1.44
SPO20YMR017W BRN1P38170 754 aa6.07□□□□□ -1.44
SPO20YMR017W AIM3P38266 947 aaKnown RBP6.07□□□□□ -1.44
SPO20YMR017W MNN1P39106 762 aa6.07□□□□□ -1.44
SPO20YMR017W DSS1P39112 969 aa6.07□□□□□ -1.44
SPO20YMR017W AVT1P47082 602 aa6.07□□□□□ -1.44
SPO20YMR017W GCV2P49095 1034 aa6.07□□□□□ -1.44
SPO20YMR017W VPS30Q02948 557 aa6.07□□□□□ -1.44
SPO20YMR017W UGO1Q03327 502 aa6.07□□□□□ -1.44
SPO20YMR017W DUS4Q06063 367 aa6.07□□□□□ -1.44
SPO20YMR017W ADY3Q07732 790 aa6.07□□□□□ -1.44
SPO20YMR017W MET7Q08645 548 aa6.07□□□□□ -1.44
SPO20YMR017W MDM12Q92328 271 aa6.07□□□□□ -1.44
SPO20YMR017W RPS13P05756 151 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 80 ms