RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	ROG3	P43602	733 aa		5.09	□□□□□ -1.59
CBF5	YLR175W	YGR125W	P53273	1036 aa		5.09	□□□□□ -1.59
CBF5	YLR175W	ORC4	P54791	529 aa		5.09	□□□□□ -1.59
CBF5	YLR175W	MFM1	Q02783	413 aa		5.09	□□□□□ -1.59
CBF5	YLR175W	FUS2	Q05670	677 aa		5.09	□□□□□ -1.59
CBF5	YLR175W	ISA1	Q07821	250 aa	Predicted RBP	5.09	□□□□□ -1.59
CBF5	YLR175W	TY3A-G	Q12173	290 aa		5.09	□□□□□ -1.59
CBF5	YLR175W	ARP6	Q12509	438 aa		5.09	□□□□□ -1.59
CBF5	YLR175W	TY3A-I	Q99219	290 aa		5.09	□□□□□ -1.59
CBF5	YLR175W	SES1	P07284	462 aa	Known RBP	5.08	□□□□□ -1.6
CBF5	YLR175W	VAC17	P25591	423 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	EUG1	P32474	517 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	HIR1	P32479	840 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	UTR4	P32626	227 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	ASH1	P34233	588 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	RRM3	P38766	723 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	NDT80	P38830	627 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	GAA1	P39012	614 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	VTC2	P43585	828 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	SDA1	P53313	767 aa	Known RBP	5.08	□□□□□ -1.6
CBF5	YLR175W	PTA1	Q01329	785 aa	Predicted RBP	5.08	□□□□□ -1.6
CBF5	YLR175W	AIM33	Q04516	312 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	UTP13	Q05946	817 aa	Known RBP	5.08	□□□□□ -1.6
CBF5	YLR175W	WHI4	Q07655	649 aa	Known RBP	5.08	□□□□□ -1.6
CBF5	YLR175W	TIF6	Q12522	245 aa	Known RBP	5.08	□□□□□ -1.6
CBF5	YLR175W	SMC6	Q12749	1114 aa		5.08	□□□□□ -1.6
CBF5	YLR175W	SAM1	P10659	382 aa	Known RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	GSY1	P23337	708 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	SEC8	P32855	1065 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	IXR1	P33417	597 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	RRD1	P40454	393 aa	Known RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	UBA2	P52488	636 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	CNM67	P53865	581 aa	Known RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	CBK1	P53894	756 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	LCD1	Q04377	747 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	PHM6	Q05637	104 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	DUS3	Q06053	668 aa	Known RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	GYP1	Q08484	637 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	OXR1	Q08952	273 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	TRS33	Q99394	268 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	FKS1	P38631	1876 aa	Known RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	PGK1	P00560	416 aa	Known RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	TUF1	P02992	437 aa	Known RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	MOD5	P07884	428 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	ISY1	P21374	235 aa	Predicted RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	TKL1	P23254	680 aa	Known RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	GSY2	P27472	705 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	PGM1	P33401	570 aa	Known RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	UBX7	P38349	436 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	SOH1	P38633	127 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	MXR1	P40029	184 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	NUP82	P40368	713 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	GPD2	P41911	440 aa	Known RBP	5.07	□□□□□ -1.6
CBF5	YLR175W	RSC1	P53236	928 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	SRF1	Q12516	437 aa		5.07	□□□□□ -1.6
CBF5	YLR175W	ILV1	P00927	576 aa	Known RBP	5.06	□□□□□ -1.6
CBF5	YLR175W	YEL076C-A	P0CX16	216 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	YLR464W	P0CX17	216 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	MIP1	P15801	1254 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	ATE1	P16639	503 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	PRP22	P24384	1145 aa	Known RBP	5.06	□□□□□ -1.6
CBF5	YLR175W	PHO87	P25360	923 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	SUV3	P32580	737 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	SHP1	P34223	423 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	UBP11	P36026	717 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	MRPL10	P36520	322 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	YEL076C	P39971	216 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	YLR225C	Q05948	407 aa	Known RBP	5.06	□□□□□ -1.6
CBF5	YLR175W	ADY4	Q05955	493 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	SGD1	Q06132	899 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	ERP3	Q12403	225 aa		5.06	□□□□□ -1.6
CBF5	YLR175W	HAP4	P14064	554 aa		5.05	□□□□□ -1.6
CBF5	YLR175W	CDC15	P27636	974 aa		5.05	□□□□□ -1.6
CBF5	YLR175W	SRP40	P32583	406 aa	Predicted RBP	5.05	□□□□□ -1.6
CBF5	YLR175W	RGT1	P32862	1170 aa		5.05	□□□□□ -1.6
CBF5	YLR175W	TIM23	P32897	222 aa		5.05	□□□□□ -1.6
CBF5	YLR175W	MPE1	P35728	441 aa	Known RBP	5.05	□□□□□ -1.6
CBF5	YLR175W	DBP7	P36120	742 aa	Known RBP	5.05	□□□□□ -1.6
CBF5	YLR175W	PET10	P36139	283 aa		5.05	□□□□□ -1.6
CBF5	YLR175W	BCD1	P38772	366 aa		5.05	□□□□□ -1.6
CBF5	YLR175W	HMF1	P40037	129 aa	Known RBP	5.05	□□□□□ -1.6
CBF5	YLR175W	TFG2	P41896	400 aa	Predicted RBP	5.05	□□□□□ -1.6
CBF5	YLR175W	BRE2	P43132	505 aa		5.05	□□□□□ -1.6
CBF5	YLR175W	SEC5	P89102	971 aa		5.05	□□□□□ -1.6
CBF5	YLR175W	YLH47	Q06493	454 aa		5.05	□□□□□ -1.6
CBF5	YLR175W	CLN3	P13365	580 aa		5.04	□□□□□ -1.6
CBF5	YLR175W	SAC6	P32599	642 aa	Known RBP	5.04	□□□□□ -1.6
CBF5	YLR175W	TFC4	P33339	1025 aa		5.04	□□□□□ -1.6
CBF5	YLR175W	TVP38	P36164	337 aa		5.04	□□□□□ -1.6
CBF5	YLR175W	ADE17	P38009	592 aa	Known RBP	5.04	□□□□□ -1.6
CBF5	YLR175W	REG2	P38232	338 aa		5.04	□□□□□ -1.6
CBF5	YLR175W	ATG1	P53104	897 aa		5.04	□□□□□ -1.6
CBF5	YLR175W	ZPR1	P53303	486 aa	Known RBP	5.04	□□□□□ -1.6
CBF5	YLR175W	VMS1	Q04311	632 aa	Known RBP	5.04	□□□□□ -1.6
CBF5	YLR175W	DUS4	Q06063	367 aa		5.04	□□□□□ -1.6
CBF5	YLR175W	PSR2	Q07949	397 aa		5.04	□□□□□ -1.6
CBF5	YLR175W	RKM4	Q12504	494 aa		5.04	□□□□□ -1.6
CBF5	YLR175W	YEL077C	Q3E7X8	1277 aa		5.04	□□□□□ -1.6
CBF5	YLR175W	SRD1	P09007	221 aa		5.03	□□□□□ -1.6
CBF5	YLR175W	MRF1	P30775	413 aa	Predicted RBP	5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 111.5 ms