RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C IRR1P40541 1150 aa7.02□□□□□ -1.29
SED5YLR026C SSF2Q12153 453 aaPredicted RBP7.02□□□□□ -1.29
SED5YLR026C MET12P46151 657 aa7.01□□□□□ -1.29
SED5YLR026C MCM6P53091 1017 aaKnown RBP7.01□□□□□ -1.29
SED5YLR026C NOP7P53261 605 aaKnown RBP7.01□□□□□ -1.29
SED5YLR026C NPP1P25353 742 aa7□□□□□ -1.29
SED5YLR026C PLB1P39105 664 aa7□□□□□ -1.29
SED5YLR026C YER158CP40095 573 aa7□□□□□ -1.29
SED5YLR026C GYP7P48365 746 aa7□□□□□ -1.29
SED5YLR026C YPR196WQ06595 470 aa7□□□□□ -1.29
SED5YLR026C YRO2P38079 344 aa6.99□□□□□ -1.29
SED5YLR026C TSL1P38427 1098 aaKnown RBP6.99□□□□□ -1.29
SED5YLR026C NOP12Q08208 459 aaKnown RBP6.99□□□□□ -1.29
SED5YLR026C HIS5P07172 385 aa6.98□□□□□ -1.29
SED5YLR026C SPE1P08432 466 aa6.98□□□□□ -1.29
SED5YLR026C HSF1P10961 833 aa6.98□□□□□ -1.29
SED5YLR026C ERT1P38140 529 aa6.98□□□□□ -1.29
SED5YLR026C CCC2P38995 1004 aa6.98□□□□□ -1.29
SED5YLR026C PFD1P46988 109 aa6.98□□□□□ -1.29
SED5YLR026C MNN10P50108 393 aaKnown RBP6.98□□□□□ -1.29
SED5YLR026C ADE8P04161 214 aa6.97□□□□□ -1.29
SED5YLR026C AFR1P33304 620 aa6.97□□□□□ -1.29
SED5YLR026C WHI4Q07655 649 aaKnown RBP6.97□□□□□ -1.29
SED5YLR026C FMP25Q08023 583 aa6.97□□□□□ -1.29
SED5YLR026C HBS1P32769 611 aaKnown RBP6.96□□□□□ -1.3
SED5YLR026C ALR2P43553 858 aa6.96□□□□□ -1.3
SED5YLR026C STE11P23561 717 aa6.95□□□□□ -1.3
SED5YLR026C CHA4P43634 648 aa6.95□□□□□ -1.3
SED5YLR026C PSP2P50109 593 aaKnown RBP6.95□□□□□ -1.3
SED5YLR026C RAD4P14736 754 aa6.94□□□□□ -1.3
SED5YLR026C PRP9P19736 530 aaKnown RBP6.94□□□□□ -1.3
SED5YLR026C HCM1P25364 564 aa6.94□□□□□ -1.3
SED5YLR026C CDC48P25694 835 aaKnown RBP6.94□□□□□ -1.3
SED5YLR026C YBR284WP38150 797 aa6.94□□□□□ -1.3
SED5YLR026C PHO23P50947 330 aa6.94□□□□□ -1.3
SED5YLR026C TPO2P53283 614 aa6.94□□□□□ -1.3
SED5YLR026C NAN1Q02931 896 aaKnown RBP6.94□□□□□ -1.3
SED5YLR026C UBX5Q06682 500 aa6.94□□□□□ -1.3
SED5YLR026C RPL8BP29453 256 aaKnown RBP6.93□□□□□ -1.3
SED5YLR026C YKR078WP36158 585 aaKnown RBP6.93□□□□□ -1.3
SED5YLR026C SIT1P39980 628 aa6.93□□□□□ -1.3
SED5YLR026C TUB2P02557 457 aaKnown RBP6.92□□□□□ -1.3
SED5YLR026C NOT3P06102 836 aaKnown RBP6.92□□□□□ -1.3
SED5YLR026C RPC82P32349 654 aa6.92□□□□□ -1.3
SED5YLR026C EAF1Q06337 982 aa6.92□□□□□ -1.3
SED5YLR026C YPR071WQ12346 211 aa6.92□□□□□ -1.3
SED5YLR026C KCS1Q12494 1050 aa6.92□□□□□ -1.3
SED5YLR026C YKE2P52553 114 aa6.91□□□□□ -1.3
SED5YLR026C RAI1P53063 387 aaKnown RBP6.91□□□□□ -1.3
SED5YLR026C SPO75Q07798 868 aa6.91□□□□□ -1.3
SED5YLR026C TOK1P40310 691 aa6.9□□□□□ -1.3
SED5YLR026C UTP8P53276 713 aaKnown RBP6.9□□□□□ -1.3
SED5YLR026C NPC2Q12408 173 aa6.9□□□□□ -1.3
SED5YLR026C RPP2AP05319 106 aaKnown RBP6.89□□□□□ -1.31
SED5YLR026C ARE1P25628 610 aa6.89□□□□□ -1.31
SED5YLR026C TIM54P47045 478 aa6.89□□□□□ -1.31
SED5YLR026C ERP6P53198 216 aa6.89□□□□□ -1.31
SED5YLR026C BUL2Q03758 920 aaKnown RBP6.89□□□□□ -1.31
SED5YLR026C LCD1Q04377 747 aa6.89□□□□□ -1.31
SED5YLR026C NTO1Q12311 748 aa6.89□□□□□ -1.31
SED5YLR026C YBR238CP38330 731 aaKnown RBP6.88□□□□□ -1.31
SED5YLR026C URM1P40554 99 aaPredicted RBP6.88□□□□□ -1.31
SED5YLR026C NCS6P53088 359 aa6.88□□□□□ -1.31
SED5YLR026C SSL1Q04673 461 aaPredicted RBP6.88□□□□□ -1.31
SED5YLR026C HBN1Q96VH4 193 aa6.88□□□□□ -1.31
SED5YLR026C PMA1P05030 918 aaKnown RBP6.87□□□□□ -1.31
SED5YLR026C CDC11P32458 415 aa6.87□□□□□ -1.31
SED5YLR026C DCG1P32460 244 aa6.87□□□□□ -1.31
SED5YLR026C RPD3P32561 433 aa6.87□□□□□ -1.31
SED5YLR026C TRM2P33753 639 aa6.87□□□□□ -1.31
SED5YLR026C ATG19P35193 415 aa6.87□□□□□ -1.31
SED5YLR026C CCM1P48237 864 aaPredicted RBP6.87□□□□□ -1.31
SED5YLR026C EXG2P52911 562 aa6.87□□□□□ -1.31
SED5YLR026C OSH2Q12451 1283 aa6.87□□□□□ -1.31
SED5YLR026C MSD1P15179 658 aaKnown RBP6.86□□□□□ -1.31
SED5YLR026C STE13P33894 931 aa6.86□□□□□ -1.31
SED5YLR026C YGR125WP53273 1036 aa6.86□□□□□ -1.31
SED5YLR026C UPC2Q12151 913 aa6.86□□□□□ -1.31
SED5YLR026C REC104P33323 182 aa6.85□□□□□ -1.31
SED5YLR026C GSF2Q04697 403 aaKnown RBP6.85□□□□□ -1.31
SED5YLR026C TOP3P13099 656 aa6.84□□□□□ -1.31
SED5YLR026C HSP60P19882 572 aaKnown RBP6.84□□□□□ -1.31
SED5YLR026C RFA1P22336 621 aaKnown RBP6.84□□□□□ -1.31
SED5YLR026C SUN4P53616 420 aa6.84□□□□□ -1.31
SED5YLR026C CIT1P00890 479 aa6.83□□□□□ -1.32
SED5YLR026C PFK1P16861 987 aaKnown RBP6.83□□□□□ -1.32
SED5YLR026C SED4P25365 1065 aa6.83□□□□□ -1.32
SED5YLR026C KAR4P25583 335 aa6.83□□□□□ -1.32
SED5YLR026C IOC3P43596 787 aa6.83□□□□□ -1.32
SED5YLR026C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32 RIP-Chip
SED5YLR026C CAD1P24813 409 aaKnown RBP6.82□□□□□ -1.32
SED5YLR026C PET10P36139 283 aa6.82□□□□□ -1.32
SED5YLR026C YIL108WP40483 696 aaKnown RBP6.82□□□□□ -1.32
SED5YLR026C CEP3P40969 608 aa6.82□□□□□ -1.32
SED5YLR026C MSE1P48525 536 aa6.82□□□□□ -1.32
SED5YLR026C VPS30Q02948 557 aa6.82□□□□□ -1.32
SED5YLR026C PUS9Q12069 462 aa6.82□□□□□ -1.32
SED5YLR026C LAS17Q12446 633 aa6.82□□□□□ -1.32
SED5YLR026C PMI40P29952 429 aaKnown RBP6.81□□□□□ -1.32
SED5YLR026C STE14P32584 239 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms