RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W YLR352WQ06479 807 aa2.66□□□□□ -1.98
NUP100YKL068W GIC2Q06648 383 aa2.66□□□□□ -1.98
NUP100YKL068W PRP8P33334 2413 aaKnown RBP2.66□□□□□ -1.98
NUP100YKL068W YLR419WQ06698 1435 aaKnown RBP2.65□□□□□ -1.98
NUP100YKL068W TRP2P00899 507 aaKnown RBP2.65□□□□□ -1.98
NUP100YKL068W SPS1P08458 490 aa2.65□□□□□ -1.98
NUP100YKL068W STE6P12866 1290 aa2.65□□□□□ -1.98
NUP100YKL068W MRF1P30775 413 aaPredicted RBP2.65□□□□□ -1.98
NUP100YKL068W MRP8P35719 219 aa2.65□□□□□ -1.98
NUP100YKL068W SAP30P38429 201 aa2.65□□□□□ -1.98
NUP100YKL068W YHL041WP38730 149 aa2.65□□□□□ -1.98
NUP100YKL068W SRB7P47822 140 aa2.65□□□□□ -1.98
NUP100YKL068W HOL1P53389 586 aa2.65□□□□□ -1.98
NUP100YKL068W CTF4Q01454 927 aa2.65□□□□□ -1.98
NUP100YKL068W TLG1Q03322 224 aa2.65□□□□□ -1.98
NUP100YKL068W ADI1Q03677 179 aa2.65□□□□□ -1.98
NUP100YKL068W BUL2Q03758 920 aaKnown RBP2.65□□□□□ -1.98
NUP100YKL068W MTQ2Q03920 221 aaPredicted RBP2.65□□□□□ -1.98
NUP100YKL068W HFD1Q04458 532 aa2.65□□□□□ -1.98
NUP100YKL068W BUG1Q12191 341 aa2.65□□□□□ -1.98
NUP100YKL068W PUS1Q12211 544 aaKnown RBP2.65□□□□□ -1.98
NUP100YKL068W FAB1P34756 2278 aa2.65□□□□□ -1.99
NUP100YKL068W TOP3P13099 656 aa2.65□□□□□ -1.99
NUP100YKL068W DAL3P32459 195 aa2.65□□□□□ -1.99
NUP100YKL068W VPH1P32563 840 aaKnown RBP2.65□□□□□ -1.99
NUP100YKL068W APE4P38821 490 aa2.65□□□□□ -1.99
NUP100YKL068W HIS6P40545 261 aa2.65□□□□□ -1.99
NUP100YKL068W SAP185P40856 1058 aa2.65□□□□□ -1.99
NUP100YKL068W ERR3P42222 437 aa2.65□□□□□ -1.99
NUP100YKL068W RSC8P43609 557 aaKnown RBP2.65□□□□□ -1.99
NUP100YKL068W GPI8P49018 411 aa2.65□□□□□ -1.99
NUP100YKL068W RRT6P53117 311 aaPredicted RBP2.65□□□□□ -1.99
NUP100YKL068W UTP8P53276 713 aaKnown RBP2.65□□□□□ -1.99
NUP100YKL068W SRP1Q02821 542 aaKnown RBP2.65□□□□□ -1.99
NUP100YKL068W VPS30Q02948 557 aa2.65□□□□□ -1.99
NUP100YKL068W NEW1Q08972 1196 aaKnown RBP2.65□□□□□ -1.99
NUP100YKL068W RRP6Q12149 733 aaKnown RBP2.65□□□□□ -1.99
NUP100YKL068W KCC4P25389 1037 aa2.64□□□□□ -1.99
NUP100YKL068W VMA3P25515 160 aa2.64□□□□□ -1.99
NUP100YKL068W BRF1P29056 596 aa2.64□□□□□ -1.99
NUP100YKL068W EBP2P36049 427 aaKnown RBP2.64□□□□□ -1.99
NUP100YKL068W TMA108P40462 946 aa2.64□□□□□ -1.99
NUP100YKL068W SUM1P46676 1062 aa2.64□□□□□ -1.99
NUP100YKL068W KRE33P53914 1056 aaKnown RBP2.64□□□□□ -1.99
NUP100YKL068W SHE9Q04172 456 aa2.64□□□□□ -1.99
NUP100YKL068W MED1Q12321 566 aa2.64□□□□□ -1.99
NUP100YKL068W FLP1P03870 423 aa2.64□□□□□ -1.99
NUP100YKL068W TOM70P07213 617 aaKnown RBP2.64□□□□□ -1.99
NUP100YKL068W FBP26P32604 452 aa2.64□□□□□ -1.99
NUP100YKL068W PBY1P38254 753 aa2.64□□□□□ -1.99
NUP100YKL068W AMN1P38285 549 aaPredicted RBP2.64□□□□□ -1.99
NUP100YKL068W GPP2P40106 250 aaKnown RBP2.64□□□□□ -1.99
NUP100YKL068W SNP1Q00916 300 aaPredicted RBP2.64□□□□□ -1.99
NUP100YKL068W MLC2Q06580 163 aa2.64□□□□□ -1.99
NUP100YKL068W TMA46Q12000 345 aaKnown RBP2.64□□□□□ -1.99
NUP100YKL068W YRF1-4O13559 1382 aa2.64□□□□□ -1.99
NUP100YKL068W MCM1P11746 286 aa2.63□□□□□ -1.99
NUP100YKL068W NAT1P12945 854 aaKnown RBP2.63□□□□□ -1.99
NUP100YKL068W KAR2P16474 682 aaKnown RBP2.63□□□□□ -1.99
NUP100YKL068W PRP5P21372 849 aaPredicted RBP2.63□□□□□ -1.99
NUP100YKL068W SBA1P28707 216 aaKnown RBP2.63□□□□□ -1.99
NUP100YKL068W PEX2P32800 271 aa2.63□□□□□ -1.99
NUP100YKL068W BEM3P32873 1128 aa2.63□□□□□ -1.99
NUP100YKL068W YKL133CP36066 463 aa2.63□□□□□ -1.99
NUP100YKL068W YBR284WP38150 797 aa2.63□□□□□ -1.99
NUP100YKL068W RXT2P38255 430 aa2.63□□□□□ -1.99
NUP100YKL068W CCC2P38995 1004 aa2.63□□□□□ -1.99
NUP100YKL068W MBP1P39678 833 aa2.63□□□□□ -1.99
NUP100YKL068W PTC2P39966 464 aaKnown RBP2.63□□□□□ -1.99
NUP100YKL068W RGD2P43556 714 aa2.63□□□□□ -1.99
NUP100YKL068W IML2P47031 731 aa2.63□□□□□ -1.99
NUP100YKL068W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
NUP100YKL068W SPC19Q03954 165 aa2.63□□□□□ -1.99
NUP100YKL068W SAS4Q04003 481 aa2.63□□□□□ -1.99
NUP100YKL068W PSR2Q07949 397 aa2.63□□□□□ -1.99
NUP100YKL068W RAD18P10862 487 aa2.63□□□□□ -1.99
NUP100YKL068W PAT1P25644 796 aaKnown RBP2.63□□□□□ -1.99
NUP100YKL068W PRP19P32523 503 aaKnown RBP2.63□□□□□ -1.99
NUP100YKL068W VMA8P32610 256 aaKnown RBP2.63□□□□□ -1.99
NUP100YKL068W UTR2P32623 467 aa2.63□□□□□ -1.99
NUP100YKL068W ANP1P32629 500 aa2.63□□□□□ -1.99
NUP100YKL068W NUP120P35729 1037 aa2.63□□□□□ -1.99
NUP100YKL068W PRE3P38624 215 aa2.63□□□□□ -1.99
NUP100YKL068W PAN5P38787 379 aa2.63□□□□□ -1.99
NUP100YKL068W RRP8P38961 392 aaKnown RBP2.63□□□□□ -1.99
NUP100YKL068W MGS1P40151 587 aa2.63□□□□□ -1.99
NUP100YKL068W PSY2P40164 858 aa2.63□□□□□ -1.99
NUP100YKL068W GNP1P48813 663 aa2.63□□□□□ -1.99
NUP100YKL068W HOS2P53096 452 aaPredicted RBP2.63□□□□□ -1.99
NUP100YKL068W MET13P53128 600 aa2.63□□□□□ -1.99
NUP100YKL068W NPY1P53164 384 aa2.63□□□□□ -1.99
NUP100YKL068W YGR016WP53209 190 aa2.63□□□□□ -1.99
NUP100YKL068W MDM12Q92328 271 aa2.63□□□□□ -1.99
NUP100YKL068W HBN1Q96VH4 193 aa2.63□□□□□ -1.99
NUP100YKL068W DAT1P13483 248 aaKnown RBP2.63□□□□□ -1.99
NUP100YKL068W IDI1P15496 288 aa2.63□□□□□ -1.99
NUP100YKL068W RER2P35196 286 aa2.63□□□□□ -1.99
NUP100YKL068W LDH1P38139 375 aa2.63□□□□□ -1.99
NUP100YKL068W VPS8P39702 1274 aa2.63□□□□□ -1.99
NUP100YKL068W SAH1P39954 449 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms