RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	RTA1	P53047	317 aa		4.22	□□□□□ -1.73
VMA10	YHR039C-A	PRP43	P53131	767 aa	Known RBP	4.22	□□□□□ -1.73
VMA10	YHR039C-A	SRT1	Q03175	343 aa		4.22	□□□□□ -1.73
VMA10	YHR039C-A	SIZ1	Q04195	904 aa		4.22	□□□□□ -1.73
VMA10	YHR039C-A	SGD1	Q06132	899 aa		4.22	□□□□□ -1.73
VMA10	YHR039C-A	UBX5	Q06682	500 aa		4.22	□□□□□ -1.73
VMA10	YHR039C-A	OSW2	Q12202	724 aa		4.22	□□□□□ -1.73
VMA10	YHR039C-A	AAR2	P32357	355 aa	Predicted RBP	4.21	□□□□□ -1.74
VMA10	YHR039C-A	HBS1	P32769	611 aa	Known RBP	4.21	□□□□□ -1.74
VMA10	YHR039C-A	BET3	P36149	193 aa		4.21	□□□□□ -1.74
VMA10	YHR039C-A	AIM3	P38266	947 aa	Known RBP	4.21	□□□□□ -1.74
VMA10	YHR039C-A	MNN1	P39106	762 aa		4.21	□□□□□ -1.74
VMA10	YHR039C-A	NPP2	P39997	493 aa		4.21	□□□□□ -1.74
VMA10	YHR039C-A	HUL4	P40985	892 aa		4.21	□□□□□ -1.74
VMA10	YHR039C-A	ROT1	Q03691	256 aa		4.21	□□□□□ -1.74
VMA10	YHR039C-A	POB3	Q04636	552 aa	Known RBP	4.21	□□□□□ -1.74
VMA10	YHR039C-A	YOR352W	Q08816	343 aa		4.21	□□□□□ -1.74
VMA10	YHR039C-A	RPS13	P05756	151 aa	Known RBP	4.2	□□□□□ -1.74
VMA10	YHR039C-A	FUN30	P31380	1131 aa		4.2	□□□□□ -1.74
VMA10	YHR039C-A	THI4	P32318	326 aa		4.2	□□□□□ -1.74
VMA10	YHR039C-A	PPH3	P32345	308 aa		4.2	□□□□□ -1.74
VMA10	YHR039C-A	YAP1801	P38856	637 aa		4.2	□□□□□ -1.74
VMA10	YHR039C-A	MEF2	P39677	819 aa		4.2	□□□□□ -1.74
VMA10	YHR039C-A	YPL277C	Q08989	487 aa		4.2	□□□□□ -1.74
VMA10	YHR039C-A	ADE8	P04161	214 aa		4.19	□□□□□ -1.74
VMA10	YHR039C-A	PRP6	P19735	899 aa	Predicted RBP	4.19	□□□□□ -1.74
VMA10	YHR039C-A	NPP1	P25353	742 aa		4.19	□□□□□ -1.74
VMA10	YHR039C-A	AFR1	P33304	620 aa		4.19	□□□□□ -1.74
VMA10	YHR039C-A	SIT1	P39980	628 aa		4.19	□□□□□ -1.74
VMA10	YHR039C-A	IRC24	P40580	263 aa		4.19	□□□□□ -1.74
VMA10	YHR039C-A	GYP7	P48365	746 aa		4.19	□□□□□ -1.74
VMA10	YHR039C-A	SFB2	P53953	876 aa		4.19	□□□□□ -1.74
VMA10	YHR039C-A	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
VMA10	YHR039C-A	UTP14	Q04500	899 aa	Known RBP	4.19	□□□□□ -1.74
VMA10	YHR039C-A	YDL124W	Q07551	312 aa	Known RBP	4.19	□□□□□ -1.74
VMA10	YHR039C-A	HBN1	Q96VH4	193 aa		4.19	□□□□□ -1.74
VMA10	YHR039C-A	SOD2	P00447	233 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	MSH2	P25847	964 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	THI80	P35202	319 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	YRO2	P38079	344 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	YBR284W	P38150	797 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	ECM21	P38167	1117 aa	Known RBP	4.18	□□□□□ -1.74
VMA10	YHR039C-A	CCC2	P38995	1004 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	UBP5	P39944	805 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	RIM8	P53179	542 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	TPO2	P53283	614 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	GCN5	Q03330	439 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	YDR132C	Q03900	495 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	DUS4	Q06063	367 aa		4.18	□□□□□ -1.74
VMA10	YHR039C-A	TOP3	P13099	656 aa		4.17	□□□□□ -1.74
VMA10	YHR039C-A	YKR078W	P36158	585 aa	Known RBP	4.17	□□□□□ -1.74
VMA10	YHR039C-A	TSL1	P38427	1098 aa	Known RBP	4.17	□□□□□ -1.74
VMA10	YHR039C-A	ZRG8	P40021	1076 aa		4.17	□□□□□ -1.74
VMA10	YHR039C-A	YJR142W	P47173	342 aa		4.17	□□□□□ -1.74
VMA10	YHR039C-A	MAL11	P53048	616 aa		4.17	□□□□□ -1.74
VMA10	YHR039C-A	BUL2	Q03758	920 aa	Known RBP	4.17	□□□□□ -1.74
VMA10	YHR039C-A	YPR071W	Q12346	211 aa		4.17	□□□□□ -1.74
VMA10	YHR039C-A	CDC6	P09119	513 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	ENA1	P13587	1091 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	CDC11	P32458	415 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	SRP101	P32916	621 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	TOD6	P34219	525 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	ERT1	P38140	529 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	GDH3	P39708	457 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	YER158C	P40095	573 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	MND2	P40577	368 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	GCV2	P49095	1034 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	SPT20	P50875	604 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	YKE2	P52553	114 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	GTF1	P53260	183 aa	Predicted RBP	4.16	□□□□□ -1.74
VMA10	YHR039C-A	PBP1	P53297	722 aa	Known RBP	4.16	□□□□□ -1.74
VMA10	YHR039C-A	DNM1	P54861	757 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	ENA2	Q01896	1091 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	YPR196W	Q06595	470 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	CDA1	Q06702	301 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	NTG2	Q08214	380 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	GPB1	Q08886	897 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	ENA5	Q12691	1091 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	YGR161W-C	Q3E744	92 aa		4.16	□□□□□ -1.74
VMA10	YHR039C-A	NOP14	Q99207	810 aa	Known RBP	4.16	□□□□□ -1.74
VMA10	YHR039C-A	CDC48	P25694	835 aa	Known RBP	4.15	□□□□□ -1.75
VMA10	YHR039C-A	TOK1	P40310	691 aa		4.15	□□□□□ -1.75
VMA10	YHR039C-A	UBP6	P43593	499 aa	Known RBP	4.15	□□□□□ -1.75
VMA10	YHR039C-A	HSV2	P50079	448 aa	Predicted RBP	4.15	□□□□□ -1.75
VMA10	YHR039C-A	YGL081W	P53156	320 aa		4.15	□□□□□ -1.75
VMA10	YHR039C-A	YGR012W	P53206	393 aa		4.15	□□□□□ -1.75
VMA10	YHR039C-A	UGO1	Q03327	502 aa		4.15	□□□□□ -1.75
VMA10	YHR039C-A	LCD1	Q04377	747 aa		4.15	□□□□□ -1.75
VMA10	YHR039C-A	TPO1	Q07824	586 aa		4.15	□□□□□ -1.75
VMA10	YHR039C-A	HSF1	P10961	833 aa		4.14	□□□□□ -1.75
VMA10	YHR039C-A	MSD1	P15179	658 aa	Known RBP	4.14	□□□□□ -1.75
VMA10	YHR039C-A	RPC82	P32349	654 aa		4.14	□□□□□ -1.75
VMA10	YHR039C-A	SCT1	P32784	759 aa		4.14	□□□□□ -1.75
VMA10	YHR039C-A	DOM34	P33309	386 aa		4.14	□□□□□ -1.75
VMA10	YHR039C-A	PET10	P36139	283 aa		4.14	□□□□□ -1.75
VMA10	YHR039C-A	YBR238C	P38330	731 aa	Known RBP	4.14	□□□□□ -1.75
VMA10	YHR039C-A	RXT3	Q07458	294 aa		4.14	□□□□□ -1.75
VMA10	YHR039C-A	ACK1	Q07622	623 aa	Predicted RBP	4.14	□□□□□ -1.75
VMA10	YHR039C-A	ADY3	Q07732	790 aa		4.14	□□□□□ -1.75
VMA10	YHR039C-A	HMI1	Q12039	706 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms