RNA–Protein interactions for RNA: YFL002W-A

YFL002W-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YFL002W-A, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-AYFL002W-A VPS8P39702 1274 aa3.34□□□□□ -1.87
YFL002W-AYFL002W-A EIS1Q05050 843 aaKnown RBP3.34□□□□□ -1.87
YFL002W-AYFL002W-A HOM3P10869 527 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A BLI1P35727 113 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A GUD1Q07729 489 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A RLP24Q07915 199 aaKnown RBP3.34□□□□□ -1.88
YFL002W-AYFL002W-A CLF1Q12309 687 aaPredicted RBP3.34□□□□□ -1.88
YFL002W-AYFL002W-A CDC12P32468 407 aaKnown RBP3.34□□□□□ -1.88
YFL002W-AYFL002W-A HOG1P32485 435 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A MCM7P38132 845 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A MSC7P38694 644 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A LSB6P42951 607 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A TAF1P46677 1066 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A SRB7P47822 140 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A CNM67P53865 581 aaKnown RBP3.34□□□□□ -1.88
YFL002W-AYFL002W-A VPS30Q02948 557 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A RKM2Q03942 479 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A PSR1Q07800 427 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A YIG1Q08956 461 aa3.34□□□□□ -1.88
YFL002W-AYFL002W-A ATP12P22135 325 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A RGD1P38339 666 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A AAD14P42884 376 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A PSK2Q08217 1101 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A SOG2Q08817 791 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A LCD1Q04377 747 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A ENV7Q12003 364 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A BI4P03879 638 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A COX11P19516 300 aaKnown RBP3.33□□□□□ -1.88
YFL002W-AYFL002W-A URA1P28272 314 aaPredicted RBP3.33□□□□□ -1.88
YFL002W-AYFL002W-A RIM4P38741 713 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A RGA1P39083 1007 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A YTA6P40328 754 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A CLA4P48562 842 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A HNT2P49775 206 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A YAP1802P53309 568 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A GTR1Q00582 310 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A YOL114CQ12322 202 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A APM4Q99186 491 aa3.33□□□□□ -1.88
YFL002W-AYFL002W-A RPL11AP0C0W9 174 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A RSC1P53236 928 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A HED1Q03937 162 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A COG8Q04632 607 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A GUP2Q08929 609 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A RPL11BQ3E757 174 aaPredicted RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A MSM1P22438 575 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A RRN3P36070 627 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A FAT1P38225 669 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A TSL1P38427 1098 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A YFR016CP43597 1233 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A YKE2P52553 114 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A PAP2P53632 584 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A CAF120P53836 1060 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A HRQ1Q05549 1077 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A RPS21BQ3E754 87 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A RET1P22276 1149 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A EMC3P36039 253 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A VRP1P37370 817 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A PTK2P47116 818 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A ENV11P53246 860 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A HFI1Q12060 488 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A RMP1Q12530 201 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A CDC4P07834 779 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A MET8P15807 274 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A SHM2P37291 469 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A YBR238CP38330 731 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A PRE3P38624 215 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A SHU2P38957 223 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A MXR1P40029 184 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A PUS4P48567 403 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A HAS1Q03532 505 aaKnown RBP3.32□□□□□ -1.88
YFL002W-AYFL002W-A HLR1Q04429 423 aa3.32□□□□□ -1.88
YFL002W-AYFL002W-A HOL1P53389 586 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A ARC35P53731 342 aaKnown RBP3.31□□□□□ -1.88
YFL002W-AYFL002W-A MEH1Q02205 184 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A ARA2Q04212 335 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A DUS3Q06053 668 aaKnown RBP3.31□□□□□ -1.88
YFL002W-AYFL002W-A INH1P01097 85 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A HOP1P20050 605 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A GFD2P25370 566 aaKnown RBP3.31□□□□□ -1.88
YFL002W-AYFL002W-A CHS3P29465 1165 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A AAR2P32357 355 aaPredicted RBP3.31□□□□□ -1.88
YFL002W-AYFL002W-A SLA2P33338 968 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A PES4P39684 611 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A GRC3Q07845 632 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A MET7Q08645 548 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A STO1P34160 861 aaKnown RBP3.31□□□□□ -1.88
YFL002W-AYFL002W-A OPY2Q06810 360 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A DID4P36108 232 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A BCD1P38772 366 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A DUN1P39009 513 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A YFL054CP43549 646 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A MTC3P53077 123 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A GYP1Q08484 637 aa3.31□□□□□ -1.88
YFL002W-AYFL002W-A SAN1P22470 610 aa3.3□□□□□ -1.88
YFL002W-AYFL002W-A SWI3P32591 825 aa3.3□□□□□ -1.88
YFL002W-AYFL002W-A NUP120P35729 1037 aa3.3□□□□□ -1.88
YFL002W-AYFL002W-A OAF3P36023 863 aa3.3□□□□□ -1.88
YFL002W-AYFL002W-A NOP4P37838 685 aaKnown RBP3.3□□□□□ -1.88
YFL002W-AYFL002W-A NMD3P38861 518 aaKnown RBP3.3□□□□□ -1.88
YFL002W-AYFL002W-A SPC72P39723 622 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms