RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB4	YFL002C	SPO21	Q12411	609 aa		4.89	□□□□□ -1.63
SPB4	YFL002C	NPP1	P25353	742 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	KIP1	P28742	1111 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	NIC96	P34077	839 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	YKL222C	P35995	705 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	EMC3	P36039	253 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	MCD4	P36051	919 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	GLY1	P37303	387 aa	Known RBP	4.88	□□□□□ -1.63
SPB4	YFL002C	YBR238C	P38330	731 aa	Known RBP	4.88	□□□□□ -1.63
SPB4	YFL002C	POL5	P39985	1022 aa	Known RBP	4.88	□□□□□ -1.63
SPB4	YFL002C	GIP2	P40036	548 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	GPP2	P40106	250 aa	Known RBP	4.88	□□□□□ -1.63
SPB4	YFL002C	HPF1	Q05164	967 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	ATG33	Q06485	197 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	BRE1	Q07457	700 aa	Known RBP	4.88	□□□□□ -1.63
SPB4	YFL002C	HOG1	P32485	435 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	PTH2	P34222	208 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	YKL151C	P36059	337 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	RIM4	P38741	713 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	MNN11	P46985	422 aa	Known RBP	4.88	□□□□□ -1.63
SPB4	YFL002C	SNP1	Q00916	300 aa	Predicted RBP	4.88	□□□□□ -1.63
SPB4	YFL002C	RSA3	Q05942	220 aa	Known RBP	4.88	□□□□□ -1.63
SPB4	YFL002C	ENV7	Q12003	364 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	YDR461C-A	Q2V2P7	80 aa		4.88	□□□□□ -1.63
SPB4	YFL002C	PRO1	P32264	428 aa		4.87	□□□□□ -1.63
SPB4	YFL002C	NOC2	P39744	710 aa	Known RBP	4.87	□□□□□ -1.63
SPB4	YFL002C	VID27	P40157	782 aa		4.87	□□□□□ -1.63
SPB4	YFL002C	VPS27	P40343	622 aa	Known RBP	4.87	□□□□□ -1.63
SPB4	YFL002C	YDR514C	Q04408	483 aa		4.87	□□□□□ -1.63
SPB4	YFL002C	HRQ1	Q05549	1077 aa		4.87	□□□□□ -1.63
SPB4	YFL002C	MET7	Q08645	548 aa		4.87	□□□□□ -1.63
SPB4	YFL002C	ACM1	Q08981	209 aa		4.87	□□□□□ -1.63
SPB4	YFL002C	SLP1	Q12232	587 aa		4.87	□□□□□ -1.63
SPB4	YFL002C	MRS6	P32864	603 aa	Known RBP	4.86	□□□□□ -1.63
SPB4	YFL002C	SLA2	P33338	968 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	YKL133C	P36066	463 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	RRP8	P38961	392 aa	Known RBP	4.86	□□□□□ -1.63
SPB4	YFL002C	AIM14	P53109	570 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	CUZ1	P53899	274 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	ADE12	P80210	433 aa	Known RBP	4.86	□□□□□ -1.63
SPB4	YFL002C	MLC2	Q06580	163 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	GUP2	Q08929	609 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	TY1A-BL	Q12266	440 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	RMP1	Q12530	201 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	RPN12	P32496	274 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	RPN3	P40016	523 aa	Known RBP	4.86	□□□□□ -1.63
SPB4	YFL002C	RSC8	P43609	557 aa	Known RBP	4.86	□□□□□ -1.63
SPB4	YFL002C	NIT3	P49954	291 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	PAP2	P53632	584 aa	Known RBP	4.86	□□□□□ -1.63
SPB4	YFL002C	ELA1	P53861	379 aa	Predicted RBP	4.86	□□□□□ -1.63
SPB4	YFL002C	YMR074C	Q04773	145 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	PSR2	Q07949	397 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	ELG1	Q12050	791 aa		4.86	□□□□□ -1.63
SPB4	YFL002C	HMG1	P12683	1054 aa		4.85	□□□□□ -1.63
SPB4	YFL002C	KCC4	P25389	1037 aa		4.85	□□□□□ -1.63
SPB4	YFL002C	DID4	P36108	232 aa		4.85	□□□□□ -1.63
SPB4	YFL002C	YKR078W	P36158	585 aa	Known RBP	4.85	□□□□□ -1.63
SPB4	YFL002C	YLL058W	Q12198	575 aa		4.85	□□□□□ -1.63
SPB4	YFL002C	SAC7	P17121	654 aa		4.84	□□□□□ -1.63
SPB4	YFL002C	ERS1	P17261	260 aa		4.84	□□□□□ -1.63
SPB4	YFL002C	DAL3	P32459	195 aa		4.84	□□□□□ -1.63
SPB4	YFL002C	BIT2	P38346	545 aa		4.84	□□□□□ -1.63
SPB4	YFL002C	TSL1	P38427	1098 aa	Known RBP	4.84	□□□□□ -1.63
SPB4	YFL002C	GPB2	P39717	880 aa		4.84	□□□□□ -1.63
SPB4	YFL002C	CCT5	P40413	562 aa	Known RBP	4.84	□□□□□ -1.63
SPB4	YFL002C	GYP7	P48365	746 aa		4.84	□□□□□ -1.63
SPB4	YFL002C	LYS5	P50113	272 aa		4.84	□□□□□ -1.63
SPB4	YFL002C	PHM6	Q05637	104 aa		4.84	□□□□□ -1.63
SPB4	YFL002C	YLR257W	Q06146	321 aa	Known RBP	4.84	□□□□□ -1.63
SPB4	YFL002C	PER1	P25625	357 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	HEM12	P32347	362 aa	Predicted RBP	4.83	□□□□□ -1.64
SPB4	YFL002C	MFT1	P33441	392 aa	Known RBP	4.83	□□□□□ -1.64
SPB4	YFL002C	UGA2	P38067	497 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	YHL041W	P38730	149 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	RPN10	P38886	268 aa	Known RBP	4.83	□□□□□ -1.64
SPB4	YFL002C	EMP65	P40085	556 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	TED1	P40533	473 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	YGR153W	P48238	217 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	ECM9	Q02202	377 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	NHX1	Q04121	633 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	YDR338C	Q05497	695 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	REH1	Q06709	432 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	TY4B-P	A0A0B7P3V8	1104 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	SSH4	P32343	579 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	MPE1	P35728	441 aa	Known RBP	4.83	□□□□□ -1.64
SPB4	YFL002C	NNK1	P36003	928 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	MAE1	P36013	669 aa	Known RBP	4.83	□□□□□ -1.64
SPB4	YFL002C	EXO84	P38261	753 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	HIS6	P40545	261 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	TY1A-MR1	Q04215	440 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	GIS4	Q04233	774 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	ENT2	Q05785	613 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	SYT1	Q06836	1226 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	TY4A-H	Q6Q5P6	413 aa		4.83	□□□□□ -1.64
SPB4	YFL002C	ENA1	P13587	1091 aa		4.82	□□□□□ -1.64
SPB4	YFL002C	NAR1	P23503	491 aa	Known RBP	4.82	□□□□□ -1.64
SPB4	YFL002C	CDC48	P25694	835 aa	Known RBP	4.82	□□□□□ -1.64
SPB4	YFL002C	ROG3	P43602	733 aa		4.82	□□□□□ -1.64
SPB4	YFL002C	RET2	P43621	546 aa		4.82	□□□□□ -1.64
SPB4	YFL002C	YKE2	P52553	114 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms