RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C DRE2P36152 348 aa1.5□□□□□ -2.17
UBP3YER151C POA1P38218 177 aa1.5□□□□□ -2.17
UBP3YER151C THI12P42883 340 aa1.5□□□□□ -2.17
UBP3YER151C THI5P43534 340 aa1.5□□□□□ -2.17
UBP3YER151C THI11P47183 340 aa1.5□□□□□ -2.17
UBP3YER151C PLB2Q03674 706 aa1.5□□□□□ -2.17
UBP3YER151C SGD1Q06132 899 aa1.5□□□□□ -2.17
UBP3YER151C THI13Q07748 340 aa1.5□□□□□ -2.17
UBP3YER151C RCL1Q08096 367 aaPredicted RBP1.5□□□□□ -2.17
UBP3YER151C INP54Q08227 384 aaKnown RBP1.5□□□□□ -2.17
UBP3YER151C SRM1P21827 482 aa1.5□□□□□ -2.17
UBP3YER151C HCM1P25364 564 aa1.5□□□□□ -2.17
UBP3YER151C YSC84P32793 468 aa1.5□□□□□ -2.17
UBP3YER151C LST4P34239 828 aa1.5□□□□□ -2.17
UBP3YER151C YKL077WP36081 392 aa1.5□□□□□ -2.17
UBP3YER151C DAK2P43550 591 aa1.5□□□□□ -2.17
UBP3YER151C HNT2P49775 206 aa1.5□□□□□ -2.17
UBP3YER151C TAF8Q03750 510 aa1.5□□□□□ -2.17
UBP3YER151C RRP15Q06511 250 aaPredicted RBP1.5□□□□□ -2.17
UBP3YER151C SPE3Q12074 293 aaKnown RBP1.5□□□□□ -2.17
UBP3YER151C TY3A-GQ12173 290 aa1.5□□□□□ -2.17
UBP3YER151C NYV1Q12255 253 aa1.5□□□□□ -2.17
UBP3YER151C TY3A-IQ99219 290 aa1.5□□□□□ -2.17
UBP3YER151C VMA4P22203 233 aaKnown RBP1.49□□□□□ -2.17
UBP3YER151C RAD53P22216 821 aa1.49□□□□□ -2.17
UBP3YER151C STE11P23561 717 aa1.49□□□□□ -2.17
UBP3YER151C QNS1P38795 714 aaKnown RBP1.49□□□□□ -2.17
UBP3YER151C MON1P53129 644 aa1.49□□□□□ -2.17
UBP3YER151C BDF2Q07442 638 aa1.49□□□□□ -2.17
UBP3YER151C MSC6Q08818 692 aaKnown RBP1.49□□□□□ -2.17
UBP3YER151C NTO1Q12311 748 aa1.49□□□□□ -2.17
UBP3YER151C YBR056W-AI2HB52 66 aa1.49□□□□□ -2.17
UBP3YER151C PUF4P25339 888 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
UBP3YER151C CDC20P26309 610 aa1.49□□□□□ -2.17
UBP3YER151C SYN8P31377 255 aa1.49□□□□□ -2.17
UBP3YER151C NMD3P38861 518 aaKnown RBP1.49□□□□□ -2.17
UBP3YER151C SUN4P53616 420 aa1.49□□□□□ -2.17
UBP3YER151C ERO1Q03103 563 aa1.49□□□□□ -2.17
UBP3YER151C RKM2Q03942 479 aa1.49□□□□□ -2.17
UBP3YER151C NOP8Q08287 484 aaPredicted RBP1.49□□□□□ -2.17
UBP3YER151C HRK1Q08732 759 aaKnown RBP1.49□□□□□ -2.17
UBP3YER151C SNF5P18480 905 aa1.48□□□□□ -2.17
UBP3YER151C MSH3P25336 1018 aa1.48□□□□□ -2.17
UBP3YER151C PMI40P29952 429 aaKnown RBP1.48□□□□□ -2.17
UBP3YER151C KRI1P42846 591 aaKnown RBP1.48□□□□□ -2.17
UBP3YER151C YNR061CP53747 219 aa1.48□□□□□ -2.17
UBP3YER151C LGE1Q02796 332 aaKnown RBP1.48□□□□□ -2.17
UBP3YER151C BUG1Q12191 341 aa1.48□□□□□ -2.17
UBP3YER151C IKI3Q06706 1349 aaKnown RBP1.48□□□□□ -2.17
UBP3YER151C CYC1P00044 109 aaPredicted RBP1.48□□□□□ -2.17
UBP3YER151C SPS1P08458 490 aa1.48□□□□□ -2.17
UBP3YER151C DCG1P32460 244 aa1.48□□□□□ -2.17
UBP3YER151C MOT2P34909 587 aaKnown RBP1.48□□□□□ -2.17
UBP3YER151C SHU2P38957 223 aa1.48□□□□□ -2.17
UBP3YER151C PIC2P40035 300 aa1.48□□□□□ -2.17
UBP3YER151C SEC26P41810 973 aaKnown RBP1.48□□□□□ -2.17
UBP3YER151C STU2P46675 888 aa1.48□□□□□ -2.17
UBP3YER151C YCS4Q06156 1176 aa1.48□□□□□ -2.17
UBP3YER151C YLR278CQ05854 1341 aa1.48□□□□□ -2.17
UBP3YER151C PMA1P05030 918 aaKnown RBP1.47□□□□□ -2.17
UBP3YER151C MCM2P29469 868 aa1.47□□□□□ -2.17
UBP3YER151C AFG2P32794 780 aa1.47□□□□□ -2.17
UBP3YER151C XKS1P42826 600 aa1.47□□□□□ -2.17
UBP3YER151C MTR4P47047 1073 aaKnown RBP1.47□□□□□ -2.17
UBP3YER151C MNN10P50108 393 aaKnown RBP1.47□□□□□ -2.17
UBP3YER151C MCM6P53091 1017 aaKnown RBP1.47□□□□□ -2.17
UBP3YER151C BRE1Q07457 700 aaKnown RBP1.47□□□□□ -2.17
UBP3YER151C NBA1Q08229 501 aaKnown RBP1.47□□□□□ -2.17
UBP3YER151C DEF1P35732 738 aaKnown RBP1.47□□□□□ -2.17
UBP3YER151C PPX1P38698 397 aa1.47□□□□□ -2.17
UBP3YER151C HSE1P38753 452 aa1.47□□□□□ -2.17
UBP3YER151C VPS53P47061 822 aa1.47□□□□□ -2.17
UBP3YER151C VPS62P53285 467 aa1.47□□□□□ -2.17
UBP3YER151C SPR28Q04921 423 aa1.47□□□□□ -2.17
UBP3YER151C IRC3Q06683 689 aa1.47□□□□□ -2.17
UBP3YER151C LAP2Q10740 671 aa1.47□□□□□ -2.17
UBP3YER151C RIB2Q12362 591 aaKnown RBP1.47□□□□□ -2.17
UBP3YER151C SPO21Q12411 609 aa1.47□□□□□ -2.17
UBP3YER151C HXK1P04806 485 aaKnown RBP1.46□□□□□ -2.17
UBP3YER151C SEC20P28791 383 aa1.46□□□□□ -2.17
UBP3YER151C PIK1P39104 1066 aa1.46□□□□□ -2.17
UBP3YER151C FYV10P40492 516 aa1.46□□□□□ -2.17
UBP3YER151C SKY1Q03656 742 aa1.46□□□□□ -2.17
UBP3YER151C ACK1Q07622 623 aaPredicted RBP1.46□□□□□ -2.17
UBP3YER151C RPT1P33299 467 aaKnown RBP1.46□□□□□ -2.18
UBP3YER151C ADD66P36040 267 aa1.46□□□□□ -2.18
UBP3YER151C RPN3P40016 523 aaKnown RBP1.46□□□□□ -2.18
UBP3YER151C MXR1P40029 184 aa1.46□□□□□ -2.18
UBP3YER151C PHO23P50947 330 aa1.46□□□□□ -2.18
UBP3YER151C DAL4Q04895 635 aa1.46□□□□□ -2.18
UBP3YER151C ESC2Q06340 456 aa1.46□□□□□ -2.18
UBP3YER151C NOC3Q07896 663 aaPredicted RBP1.46□□□□□ -2.18
UBP3YER151C LAM4P38800 1345 aa1.46□□□□□ -2.18
UBP3YER151C SAC3P46674 1301 aa1.46□□□□□ -2.18
UBP3YER151C KIP1P28742 1111 aa1.46□□□□□ -2.18
UBP3YER151C NUP84P52891 726 aa1.46□□□□□ -2.18
UBP3YER151C ART5P53244 586 aaKnown RBP1.46□□□□□ -2.18
UBP3YER151C ULP1Q02724 621 aa1.46□□□□□ -2.18
UBP3YER151C HOS3Q02959 697 aaKnown RBP1.46□□□□□ -2.18
UBP3YER151C ROT1Q03691 256 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms