RNA–Protein interactions for RNA: YER119C

AVT6, Transcript of Vacuolar aspartate and glutamate exporter, yeastyeast

Gene AVT6, Length 1,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT6YER119C NEW1Q08972 1196 aaKnown RBP11.34□□□□□ -0.59
AVT6YER119C CWC2Q12046 339 aaPredicted RBP11.34□□□□□ -0.59
AVT6YER119C SSB1P11484 613 aaKnown RBP11.33□□□□□ -0.6
AVT6YER119C YSC83P32792 385 aa11.33□□□□□ -0.6
AVT6YER119C AVT3P36062 692 aa11.33□□□□□ -0.6
AVT6YER119C SSB2P40150 613 aaKnown RBP11.33□□□□□ -0.6
AVT6YER119C JSN1P47135 1091 aaKnown RBP RIP-Chip data11.33□□□□□ -0.6not detected
AVT6YER119C CCM1P48237 864 aaPredicted RBP11.33□□□□□ -0.6
AVT6YER119C DBP5P20449 482 aaKnown RBP11.32□□□□□ -0.6
AVT6YER119C YEL1P34225 687 aa11.32□□□□□ -0.6
AVT6YER119C PCH2P38126 564 aa11.32□□□□□ -0.6
AVT6YER119C FIG4P42837 879 aa11.32□□□□□ -0.6
AVT6YER119C ERG5P54781 538 aa11.32□□□□□ -0.6
AVT6YER119C ROD1Q02805 837 aa11.32□□□□□ -0.6
AVT6YER119C YMR321CQ04898 105 aa11.32□□□□□ -0.6
AVT6YER119C SVF1Q05515 481 aa11.32□□□□□ -0.6
AVT6YER119C SMC5Q08204 1093 aa11.32□□□□□ -0.6
AVT6YER119C FAL1Q12099 399 aaKnown RBP11.32□□□□□ -0.6
AVT6YER119C RRP6Q12149 733 aaKnown RBP11.32□□□□□ -0.6
AVT6YER119C COT1P32798 439 aa11.31□□□□□ -0.6
AVT6YER119C ATG19P35193 415 aa11.31□□□□□ -0.6
AVT6YER119C YEL025CP39991 1188 aa11.31□□□□□ -0.6
AVT6YER119C MDR1P53258 950 aa11.31□□□□□ -0.6
AVT6YER119C RLP24Q07915 199 aaKnown RBP11.31□□□□□ -0.6
AVT6YER119C SEC23P15303 768 aaKnown RBP11.3□□□□□ -0.6
AVT6YER119C CDC48P25694 835 aaKnown RBP11.3□□□□□ -0.6
AVT6YER119C RGT1P32862 1170 aa11.3□□□□□ -0.6
AVT6YER119C KTR2P33550 425 aa11.3□□□□□ -0.6
AVT6YER119C VPS35P34110 944 aa11.3□□□□□ -0.6
AVT6YER119C ETP1P38748 585 aaKnown RBP11.3□□□□□ -0.6
AVT6YER119C CCC2P38995 1004 aa11.3□□□□□ -0.6
AVT6YER119C MXR1P40029 184 aa11.3□□□□□ -0.6
AVT6YER119C VPS53P47061 822 aa11.3□□□□□ -0.6
AVT6YER119C UME1Q03010 460 aa11.3□□□□□ -0.6
AVT6YER119C MSC6Q08818 692 aaKnown RBP11.3□□□□□ -0.6
AVT6YER119C TRM11Q12463 433 aa11.3□□□□□ -0.6
AVT6YER119C PPR1P07272 904 aaPredicted RBP11.29□□□□□ -0.6
AVT6YER119C SPO12P17123 173 aa11.29□□□□□ -0.6
AVT6YER119C RME1P32338 300 aaKnown RBP11.29□□□□□ -0.6
AVT6YER119C TIM23P32897 222 aa11.29□□□□□ -0.6
AVT6YER119C SHQ1P40486 507 aaPredicted RBP11.29□□□□□ -0.6
AVT6YER119C YAP5P40574 245 aa11.29□□□□□ -0.6
AVT6YER119C LCB2P40970 561 aa11.29□□□□□ -0.6
AVT6YER119C OSW7P43611 510 aa11.29□□□□□ -0.6
AVT6YER119C COS5P47187 383 aa11.29□□□□□ -0.6
AVT6YER119C GIR2Q03768 265 aaPredicted RBP11.29□□□□□ -0.6
AVT6YER119C SCP160P06105 1222 aaKnown RBP RIP-Chip data11.28□□□□□ -0.6not detected
AVT6YER119C YUR1P26725 428 aa11.28□□□□□ -0.6
AVT6YER119C NAM7P30771 971 aaKnown RBP11.28□□□□□ -0.6
AVT6YER119C ATG3P40344 310 aa11.28□□□□□ -0.6
AVT6YER119C SDS3P40505 327 aa11.28□□□□□ -0.6
AVT6YER119C UTP5Q04177 643 aaKnown RBP11.28□□□□□ -0.6
AVT6YER119C DON1Q05610 365 aa11.28□□□□□ -0.6
AVT6YER119C COQ9Q05779 260 aa11.28□□□□□ -0.6
AVT6YER119C DED1P06634 604 aaKnown RBP11.27□□□□□ -0.61
AVT6YER119C SWI6P09959 803 aa11.27□□□□□ -0.61
AVT6YER119C RRP43P25359 394 aaPredicted RBP11.27□□□□□ -0.61
AVT6YER119C SMC2P38989 1170 aaKnown RBP11.27□□□□□ -0.61
AVT6YER119C SMC3P47037 1230 aa11.27□□□□□ -0.61
AVT6YER119C RPS7BP48164 190 aaKnown RBP11.27□□□□□ -0.61
AVT6YER119C ATG1P53104 897 aa11.27□□□□□ -0.61
AVT6YER119C TAM41P53230 385 aa11.27□□□□□ -0.61
AVT6YER119C YLR225CQ05948 407 aaKnown RBP11.27□□□□□ -0.61
AVT6YER119C CDC53Q12018 815 aaKnown RBP11.27□□□□□ -0.61
AVT6YER119C NCR1Q12200 1170 aa11.27□□□□□ -0.61
AVT6YER119C TIF6Q12522 245 aaKnown RBP11.27□□□□□ -0.61
AVT6YER119C MTF2P10849 440 aa11.26□□□□□ -0.61
AVT6YER119C TUP1P16649 713 aa11.26□□□□□ -0.61
AVT6YER119C PDC6P26263 563 aaKnown RBP11.26□□□□□ -0.61
AVT6YER119C ERC1P38767 581 aa11.26□□□□□ -0.61
AVT6YER119C CAJ1P39101 391 aa11.26□□□□□ -0.61
AVT6YER119C AVT1P47082 602 aa11.26□□□□□ -0.61
AVT6YER119C APT1P49435 187 aaKnown RBP11.26□□□□□ -0.61
AVT6YER119C YLR297WQ05899 129 aa11.26□□□□□ -0.61
AVT6YER119C YPR078CQ06813 372 aa11.26□□□□□ -0.61
AVT6YER119C NOC3Q07896 663 aaPredicted RBP11.26□□□□□ -0.61
AVT6YER119C CHS2P14180 963 aa11.25□□□□□ -0.61
AVT6YER119C PRE10P21242 288 aaKnown RBP RIP-Chip data11.25□□□□□ -0.61not detected
AVT6YER119C EFT1P32324 842 aaKnown RBP11.25□□□□□ -0.61
AVT6YER119C STO1P34160 861 aaKnown RBP11.25□□□□□ -0.61
AVT6YER119C IES1P43579 692 aa11.25□□□□□ -0.61
AVT6YER119C RTT102P53330 157 aa11.25□□□□□ -0.61
AVT6YER119C TIM8P57744 87 aa11.25□□□□□ -0.61
AVT6YER119C HOS3Q02959 697 aaKnown RBP11.25□□□□□ -0.61
AVT6YER119C CSR1Q06705 408 aaKnown RBP11.25□□□□□ -0.61
AVT6YER119C OPY2Q06810 360 aa11.25□□□□□ -0.61
AVT6YER119C GPI13Q07830 1017 aa11.25□□□□□ -0.61
AVT6YER119C MLH2Q07980 695 aa11.25□□□□□ -0.61
AVT6YER119C IES4Q08561 116 aa11.25□□□□□ -0.61
AVT6YER119C MET7Q08645 548 aa11.25□□□□□ -0.61
AVT6YER119C YLL058WQ12198 575 aa11.25□□□□□ -0.61
AVT6YER119C YOL098CQ12496 1037 aa11.25□□□□□ -0.61
AVT6YER119C PET111P08468 800 aa11.24□□□□□ -0.61
AVT6YER119C MCX1P38323 520 aaPredicted RBP11.24□□□□□ -0.61
AVT6YER119C EFM4P40516 257 aa11.24□□□□□ -0.61
AVT6YER119C PET123P17558 318 aa11.23□□□□□ -0.61
AVT6YER119C KIN82P25341 720 aa11.23□□□□□ -0.61
AVT6YER119C IRE1P32361 1115 aa11.23□□□□□ -0.61
AVT6YER119C NIP100P33420 868 aa11.23□□□□□ -0.61
AVT6YER119C EAF5P39995 279 aa11.23□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms