RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C HCM1P25364 564 aa4.37□□□□□ -1.71
SNU56YDR240C TRM2P33753 639 aa4.37□□□□□ -1.71
SNU56YDR240C PAM1P37304 830 aaKnown RBP4.37□□□□□ -1.71
SNU56YDR240C PBY1P38254 753 aa4.37□□□□□ -1.71
SNU56YDR240C CCC2P38995 1004 aa4.37□□□□□ -1.71
SNU56YDR240C CHA4P43634 648 aa4.37□□□□□ -1.71
SNU56YDR240C GYP7P48365 746 aa4.37□□□□□ -1.71
SNU56YDR240C GCV2P49095 1034 aa4.37□□□□□ -1.71
SNU56YDR240C TPO2P53283 614 aa4.37□□□□□ -1.71
SNU56YDR240C DUS3Q06053 668 aaKnown RBP4.37□□□□□ -1.71
SNU56YDR240C SPE1P08432 466 aa4.36□□□□□ -1.71
SNU56YDR240C DCG1P32460 244 aa4.36□□□□□ -1.71
SNU56YDR240C YPT53P36019 220 aa4.36□□□□□ -1.71
SNU56YDR240C YKL069WP36088 180 aa4.36□□□□□ -1.71
SNU56YDR240C VAC8P39968 578 aa4.36□□□□□ -1.71
SNU56YDR240C PUS9Q12069 462 aa4.36□□□□□ -1.71
SNU56YDR240C PMA1P05030 918 aaKnown RBP4.35□□□□□ -1.71
SNU56YDR240C PMI40P29952 429 aaKnown RBP4.35□□□□□ -1.71
SNU56YDR240C SRP101P32916 621 aa4.35□□□□□ -1.71
SNU56YDR240C YBR238CP38330 731 aaKnown RBP4.35□□□□□ -1.71
SNU56YDR240C SPF1P39986 1215 aaKnown RBP4.35□□□□□ -1.71
SNU56YDR240C IRR1P40541 1150 aa4.35□□□□□ -1.71
SNU56YDR240C ALD6P54115 500 aaKnown RBP4.35□□□□□ -1.71
SNU56YDR240C PRP9P19736 530 aaKnown RBP4.34□□□□□ -1.71
SNU56YDR240C PRI2P20457 528 aa4.34□□□□□ -1.71
SNU56YDR240C PLB1P39105 664 aa4.34□□□□□ -1.71
SNU56YDR240C SIT1P39980 628 aa4.34□□□□□ -1.71
SNU56YDR240C YER158CP40095 573 aa4.34□□□□□ -1.71
SNU56YDR240C URM1P40554 99 aaPredicted RBP4.34□□□□□ -1.71
SNU56YDR240C NTO1Q12311 748 aa4.34□□□□□ -1.71
SNU56YDR240C NPP2P39997 493 aa4.33□□□□□ -1.72
SNU56YDR240C YDR306CQ06640 478 aa4.33□□□□□ -1.72
SNU56YDR240C PPH3P32345 308 aa4.32□□□□□ -1.72
SNU56YDR240C TSL1P38427 1098 aaKnown RBP4.32□□□□□ -1.72
SNU56YDR240C MSE1P48525 536 aa4.32□□□□□ -1.72
SNU56YDR240C YKE2P52553 114 aa4.32□□□□□ -1.72
SNU56YDR240C EXG2P52911 562 aa4.32□□□□□ -1.72
SNU56YDR240C TDA5Q06417 326 aaKnown RBP4.32□□□□□ -1.72
SNU56YDR240C ADE8P04161 214 aa4.31□□□□□ -1.72
SNU56YDR240C CDC48P25694 835 aaKnown RBP4.31□□□□□ -1.72
SNU56YDR240C SFB2P53953 876 aa4.31□□□□□ -1.72
SNU56YDR240C ENB1Q08299 606 aa4.31□□□□□ -1.72
SNU56YDR240C KCS1Q12494 1050 aa4.31□□□□□ -1.72
SNU56YDR240C AAR2P32357 355 aaPredicted RBP4.3□□□□□ -1.72
SNU56YDR240C RAI1P53063 387 aaKnown RBP4.3□□□□□ -1.72
SNU56YDR240C NCS6P53088 359 aa4.3□□□□□ -1.72
SNU56YDR240C YPR196WQ06595 470 aa4.3□□□□□ -1.72
SNU56YDR240C GUP2Q08929 609 aa4.3□□□□□ -1.72
SNU56YDR240C SSF2Q12153 453 aaPredicted RBP4.3□□□□□ -1.72
SNU56YDR240C DEF1P35732 738 aaKnown RBP4.3□□□□□ -1.72
SNU56YDR240C AIM21P40563 679 aa4.3□□□□□ -1.72
SNU56YDR240C CCM1P48237 864 aaPredicted RBP4.3□□□□□ -1.72
SNU56YDR240C SLI1P53304 468 aa4.3□□□□□ -1.72
SNU56YDR240C NPC2Q12408 173 aa4.3□□□□□ -1.72
SNU56YDR240C STE5P32917 917 aa4.29□□□□□ -1.72
SNU56YDR240C AFR1P33304 620 aa4.29□□□□□ -1.72
SNU56YDR240C PFD1P46988 109 aa4.29□□□□□ -1.72
SNU56YDR240C PHO23P50947 330 aa4.29□□□□□ -1.72
SNU56YDR240C WRS1Q12109 432 aaKnown RBP4.29□□□□□ -1.72
SNU56YDR240C PFK1P16861 987 aaKnown RBP4.28□□□□□ -1.72
SNU56YDR240C NPP1P25353 742 aa4.28□□□□□ -1.72
SNU56YDR240C YRO2P38079 344 aa4.28□□□□□ -1.72
SNU56YDR240C YBR184WP38299 523 aa4.28□□□□□ -1.72
SNU56YDR240C NAN1Q02931 896 aaKnown RBP4.28□□□□□ -1.72
SNU56YDR240C VPS30Q02948 557 aa4.28□□□□□ -1.72
SNU56YDR240C LCD1Q04377 747 aa4.28□□□□□ -1.72
SNU56YDR240C NOT3P06102 836 aaKnown RBP4.27□□□□□ -1.73
SNU56YDR240C CDC11P32458 415 aa4.27□□□□□ -1.73
SNU56YDR240C HBS1P32769 611 aaKnown RBP4.27□□□□□ -1.73
SNU56YDR240C NOP7P53261 605 aaKnown RBP4.27□□□□□ -1.73
SNU56YDR240C UTP8P53276 713 aaKnown RBP4.27□□□□□ -1.73
SNU56YDR240C BUL2Q03758 920 aaKnown RBP4.27□□□□□ -1.73
SNU56YDR240C FMP25Q08023 583 aa4.27□□□□□ -1.73
SNU56YDR240C UPC2Q12151 913 aa4.27□□□□□ -1.73
SNU56YDR240C ERP6P53198 216 aa4.26□□□□□ -1.73
SNU56YDR240C SUN4P53616 420 aa4.26□□□□□ -1.73
SNU56YDR240C SPO75Q07798 868 aa4.26□□□□□ -1.73
SNU56YDR240C SED4P25365 1065 aa4.25□□□□□ -1.73
SNU56YDR240C GRX1P25373 110 aaKnown RBP4.25□□□□□ -1.73
SNU56YDR240C STE13P33894 931 aa4.25□□□□□ -1.73
SNU56YDR240C CHS7P38843 316 aa4.25□□□□□ -1.73
SNU56YDR240C MSS4P38994 779 aa4.25□□□□□ -1.73
SNU56YDR240C YJL049WP47048 450 aa4.25□□□□□ -1.73
SNU56YDR240C CTF4Q01454 927 aa4.25□□□□□ -1.73
SNU56YDR240C WHI4Q07655 649 aaKnown RBP4.25□□□□□ -1.73
SNU56YDR240C AIM39Q08223 395 aa4.25□□□□□ -1.73
SNU56YDR240C FBP1P09201 348 aa4.24□□□□□ -1.73
SNU56YDR240C KAR4P25583 335 aa4.24□□□□□ -1.73
SNU56YDR240C HRR25P29295 494 aaKnown RBP4.24□□□□□ -1.73
SNU56YDR240C STE14P32584 239 aa4.24□□□□□ -1.73
SNU56YDR240C REC104P33323 182 aa4.24□□□□□ -1.73
SNU56YDR240C ALR2P43553 858 aa4.24□□□□□ -1.73
SNU56YDR240C RPL8BP29453 256 aaKnown RBP4.24□□□□□ -1.73
SNU56YDR240C TOK1P40310 691 aa4.24□□□□□ -1.73
SNU56YDR240C KIN4Q01919 800 aa4.24□□□□□ -1.73
SNU56YDR240C RFA1P22336 621 aaKnown RBP4.23□□□□□ -1.73
SNU56YDR240C EAF1Q06337 982 aa4.23□□□□□ -1.73
SNU56YDR240C LAS17Q12446 633 aa4.23□□□□□ -1.73
SNU56YDR240C OSH2Q12451 1283 aa4.23□□□□□ -1.73
SNU56YDR240C RAD53P22216 821 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms