RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W ARO10Q06408 635 aa2.28□□□□□ -2.05
PRP42YDR235W MCD1Q12158 566 aa2.28□□□□□ -2.05
PRP42YDR235W YUR1P26725 428 aa2.27□□□□□ -2.05
PRP42YDR235W CDC3P32457 520 aaKnown RBP2.27□□□□□ -2.05
PRP42YDR235W PNT1P38969 423 aa2.27□□□□□ -2.05
PRP42YDR235W VPS73P53142 486 aaKnown RBP2.27□□□□□ -2.05
PRP42YDR235W SPP382Q06411 708 aaPredicted RBP2.27□□□□□ -2.05
PRP42YDR235W MRL1Q06815 381 aa2.27□□□□□ -2.05
PRP42YDR235W FRE5Q08908 694 aa2.27□□□□□ -2.05
PRP42YDR235W CDC43P18898 376 aa2.26□□□□□ -2.05
PRP42YDR235W MET4P32389 672 aa2.26□□□□□ -2.05
PRP42YDR235W YHL050CP38721 697 aa2.26□□□□□ -2.05
PRP42YDR235W YHR219WP38900 624 aa2.26□□□□□ -2.05
PRP42YDR235W GNP1P48813 663 aa2.26□□□□□ -2.05
PRP42YDR235W UPC2Q12151 913 aa2.26□□□□□ -2.05
PRP42YDR235W MET6P05694 767 aaKnown RBP2.25□□□□□ -2.05
PRP42YDR235W SED4P25365 1065 aa2.25□□□□□ -2.05
PRP42YDR235W ERG5P54781 538 aa2.25□□□□□ -2.05
PRP42YDR235W HAT1Q12341 374 aa2.25□□□□□ -2.05
PRP42YDR235W RPT1P33299 467 aaKnown RBP2.24□□□□□ -2.05
PRP42YDR235W YIL166CP40445 542 aa2.24□□□□□ -2.05
PRP42YDR235W TIF35Q04067 274 aaKnown RBP2.24□□□□□ -2.05
PRP42YDR235W GAT1P43574 510 aa2.24□□□□□ -2.05
PRP42YDR235W SLU7Q02775 382 aaKnown RBP2.24□□□□□ -2.05
PRP42YDR235W MDM38Q08179 573 aa2.24□□□□□ -2.05
PRP42YDR235W MET3P08536 511 aa2.23□□□□□ -2.05
PRP42YDR235W STE14P32584 239 aa2.23□□□□□ -2.05
PRP42YDR235W RGT1P32862 1170 aa2.23□□□□□ -2.05
PRP42YDR235W RER2P35196 286 aa2.23□□□□□ -2.05
PRP42YDR235W SRT1Q03175 343 aa2.23□□□□□ -2.05
PRP42YDR235W YLL058WQ12198 575 aa2.23□□□□□ -2.05
PRP42YDR235W GCR1P07261 785 aa2.22□□□□□ -2.05
PRP42YDR235W KIN3P22209 435 aa2.22□□□□□ -2.05
PRP42YDR235W ADY2P25613 283 aa2.22□□□□□ -2.05
PRP42YDR235W FUN30P31380 1131 aa2.22□□□□□ -2.05
PRP42YDR235W YKL151CP36059 337 aa2.21□□□□□ -2.06
PRP42YDR235W GIC1P38785 314 aa2.21□□□□□ -2.06
PRP42YDR235W DLT1Q04216 342 aa2.21□□□□□ -2.06
PRP42YDR235W ADY4Q05955 493 aa2.21□□□□□ -2.06
PRP42YDR235W PEX19Q07418 342 aa2.21□□□□□ -2.06
PRP42YDR235W PCL5P38794 229 aa2.2□□□□□ -2.06
PRP42YDR235W ELO3P40319 345 aa2.2□□□□□ -2.06
PRP42YDR235W STB2P46679 850 aa2.2□□□□□ -2.06
PRP42YDR235W PUS2P53167 370 aa2.2□□□□□ -2.06
PRP42YDR235W YGR122WP53272 402 aa2.2□□□□□ -2.06
PRP42YDR235W HRQ1Q05549 1077 aa2.2□□□□□ -2.06
PRP42YDR235W RAD2P07276 1031 aa2.2□□□□□ -2.06
PRP42YDR235W RAD27P26793 382 aa2.2□□□□□ -2.06
PRP42YDR235W PPX1P38698 397 aa2.2□□□□□ -2.06
PRP42YDR235W MRI1Q06489 411 aaKnown RBP2.2□□□□□ -2.06
PRP42YDR235W CAF20P12962 161 aaKnown RBP2.19□□□□□ -2.06
PRP42YDR235W ORC2P32833 620 aa2.19□□□□□ -2.06
PRP42YDR235W CTF13P35203 478 aa2.19□□□□□ -2.06
PRP42YDR235W THI12P42883 340 aa2.19□□□□□ -2.06
PRP42YDR235W THI5P43534 340 aa2.19□□□□□ -2.06
PRP42YDR235W THI11P47183 340 aa2.19□□□□□ -2.06
PRP42YDR235W THI13Q07748 340 aa2.19□□□□□ -2.06
PRP42YDR235W APM1Q00776 475 aaPredicted RBP2.18□□□□□ -2.06
PRP42YDR235W SEC21P32074 935 aaKnown RBP2.17□□□□□ -2.06
PRP42YDR235W BPL1P48445 690 aaPredicted RBP2.17□□□□□ -2.06
PRP42YDR235W SFB2P53953 876 aa2.17□□□□□ -2.06
PRP42YDR235W SSA1P10591 642 aaKnown RBP2.17□□□□□ -2.06
PRP42YDR235W SPO11P23179 398 aa2.17□□□□□ -2.06
PRP42YDR235W DMC1P25453 334 aa2.17□□□□□ -2.06
PRP42YDR235W SAH1P39954 449 aaKnown RBP2.17□□□□□ -2.06
PRP42YDR235W NPP2P39997 493 aa2.17□□□□□ -2.06
PRP42YDR235W RIM13Q03792 727 aa2.17□□□□□ -2.06
PRP42YDR235W CRR1Q05790 422 aa2.17□□□□□ -2.06
PRP42YDR235W CYC8P14922 966 aa2.16□□□□□ -2.06
PRP42YDR235W RPC82P32349 654 aa2.16□□□□□ -2.06
PRP42YDR235W MUP1P50276 574 aa2.16□□□□□ -2.06
PRP42YDR235W RAI1P53063 387 aaKnown RBP2.16□□□□□ -2.06
PRP42YDR235W MRPS35P53292 345 aa2.16□□□□□ -2.06
PRP42YDR235W RIA1P53893 1110 aa2.16□□□□□ -2.06
PRP42YDR235W WHI5Q12416 295 aa2.16□□□□□ -2.06
PRP42YDR235W TRM11Q12463 433 aa2.16□□□□□ -2.06
PRP42YDR235W MSC6Q08818 692 aaKnown RBP2.15□□□□□ -2.07
PRP42YDR235W RTT10Q08924 1013 aa2.15□□□□□ -2.07
PRP42YDR235W INO1P11986 533 aa2.14□□□□□ -2.07
PRP42YDR235W PTP1P25044 335 aa2.14□□□□□ -2.07
PRP42YDR235W RPS26AP39938 119 aaKnown RBP2.14□□□□□ -2.07
PRP42YDR235W RPS26BP39939 119 aaKnown RBP2.14□□□□□ -2.07
PRP42YDR235W FKH2P41813 862 aa2.14□□□□□ -2.07
PRP42YDR235W YJL163CP46996 555 aa2.14□□□□□ -2.07
PRP42YDR235W DAM1P53267 343 aa2.14□□□□□ -2.07
PRP42YDR235W SEG1Q04279 960 aa2.14□□□□□ -2.07
PRP42YDR235W YPR196WQ06595 470 aa2.14□□□□□ -2.07
PRP42YDR235W YPL066WQ12194 479 aa2.14□□□□□ -2.07
PRP42YDR235W RGT2Q12300 763 aa2.14□□□□□ -2.07
PRP42YDR235W MOT2P34909 587 aaKnown RBP2.13□□□□□ -2.07
PRP42YDR235W CBR1P38626 284 aaKnown RBP2.13□□□□□ -2.07
PRP42YDR235W YGL176CP46945 554 aa2.13□□□□□ -2.07
PRP42YDR235W MPS1P54199 764 aa2.13□□□□□ -2.07
PRP42YDR235W TDA9Q04545 1251 aa2.13□□□□□ -2.07
PRP42YDR235W SWM1Q12379 170 aa2.13□□□□□ -2.07
PRP42YDR235W HOM2P13663 365 aaKnown RBP2.13□□□□□ -2.07
PRP42YDR235W LYP1P32487 611 aa2.13□□□□□ -2.07
PRP42YDR235W BNA3P47039 444 aaKnown RBP2.13□□□□□ -2.07
PRP42YDR235W YGR053CP53234 283 aa2.13□□□□□ -2.07
PRP42YDR235W SSL1Q04673 461 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 134 ms