RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B GIC1P38785 314 aa3.13□□□□□ -1.91
HTL1YCR020W-B SFB2P53953 876 aa3.13□□□□□ -1.91
HTL1YCR020W-B YPR196WQ06595 470 aa3.13□□□□□ -1.91
HTL1YCR020W-B KAR4P25583 335 aa3.12□□□□□ -1.91
HTL1YCR020W-B FUN30P31380 1131 aa3.12□□□□□ -1.91
HTL1YCR020W-B PIN4P34217 668 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
HTL1YCR020W-B OAR1P35731 278 aa3.12□□□□□ -1.91
HTL1YCR020W-B MBP1P39678 833 aa3.12□□□□□ -1.91
HTL1YCR020W-B MET10P39692 1035 aa3.12□□□□□ -1.91
HTL1YCR020W-B SNF7P39929 240 aaKnown RBP3.12□□□□□ -1.91
HTL1YCR020W-B NCS6P53088 359 aa3.12□□□□□ -1.91
HTL1YCR020W-B YMR206WQ03695 313 aa3.12□□□□□ -1.91
HTL1YCR020W-B YLL058WQ12198 575 aa3.12□□□□□ -1.91
HTL1YCR020W-B EFT1P32324 842 aaKnown RBP3.11□□□□□ -1.91
HTL1YCR020W-B ASF1P32447 279 aa3.11□□□□□ -1.91
HTL1YCR020W-B SRP1Q02821 542 aaKnown RBP3.11□□□□□ -1.91
HTL1YCR020W-B GDE1Q02979 1223 aa3.11□□□□□ -1.91
HTL1YCR020W-B LAS17Q12446 633 aa3.11□□□□□ -1.91
HTL1YCR020W-B ATG19P35193 415 aa3.1□□□□□ -1.91
HTL1YCR020W-B MNR2P35724 969 aa3.1□□□□□ -1.91
HTL1YCR020W-B NPP2P39997 493 aa3.1□□□□□ -1.91
HTL1YCR020W-B FAA4P47912 694 aaKnown RBP3.1□□□□□ -1.91
HTL1YCR020W-B CWC24P53769 259 aa3.1□□□□□ -1.91
HTL1YCR020W-B DUS3Q06053 668 aaKnown RBP3.1□□□□□ -1.91
HTL1YCR020W-B YLR040CQ07988 224 aa3.1□□□□□ -1.91
HTL1YCR020W-B YOL073CQ08232 322 aa3.1□□□□□ -1.91
HTL1YCR020W-B ENB1Q08299 606 aa3.1□□□□□ -1.91
HTL1YCR020W-B FAL1Q12099 399 aaKnown RBP3.1□□□□□ -1.91
HTL1YCR020W-B URM1P40554 99 aaPredicted RBP3.09□□□□□ -1.91
HTL1YCR020W-B YGR053CP53234 283 aa3.09□□□□□ -1.91
HTL1YCR020W-B SED4P25365 1065 aa3.08□□□□□ -1.92
HTL1YCR020W-B BUL1P48524 976 aa3.08□□□□□ -1.92
HTL1YCR020W-B STB4P50104 949 aa3.08□□□□□ -1.92
HTL1YCR020W-B UPC2Q12151 913 aa3.08□□□□□ -1.92
HTL1YCR020W-B ERG4P25340 473 aa3.07□□□□□ -1.92
HTL1YCR020W-B PPH3P32345 308 aa3.07□□□□□ -1.92
HTL1YCR020W-B CDC12P32468 407 aaKnown RBP3.07□□□□□ -1.92
HTL1YCR020W-B RAI1P53063 387 aaKnown RBP3.07□□□□□ -1.92
HTL1YCR020W-B YDR306CQ06640 478 aa3.07□□□□□ -1.92
HTL1YCR020W-B NOP8Q08287 484 aaPredicted RBP3.07□□□□□ -1.92
HTL1YCR020W-B GUP2Q08929 609 aa3.07□□□□□ -1.92
HTL1YCR020W-B NOT3P06102 836 aaKnown RBP3.06□□□□□ -1.92
HTL1YCR020W-B KTR4P38131 464 aa3.06□□□□□ -1.92
HTL1YCR020W-B YER158CP40095 573 aa3.06□□□□□ -1.92
HTL1YCR020W-B MAD1P40957 749 aa3.06□□□□□ -1.92
HTL1YCR020W-B KRI1P42846 591 aaKnown RBP3.06□□□□□ -1.92
HTL1YCR020W-B MCH5Q08777 521 aa3.06□□□□□ -1.92
HTL1YCR020W-B PRI2P20457 528 aa3.05□□□□□ -1.92
HTL1YCR020W-B SBA1P28707 216 aaKnown RBP3.05□□□□□ -1.92
HTL1YCR020W-B RPC82P32349 654 aa3.05□□□□□ -1.92
HTL1YCR020W-B VBA5P36172 582 aa3.05□□□□□ -1.92
HTL1YCR020W-B STU2P46675 888 aa3.05□□□□□ -1.92
HTL1YCR020W-B GYP7P48365 746 aa3.05□□□□□ -1.92
HTL1YCR020W-B NPL3Q01560 414 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
HTL1YCR020W-B RNT1Q02555 471 aa3.05□□□□□ -1.92
HTL1YCR020W-B TMN2Q04562 672 aa3.05□□□□□ -1.92
HTL1YCR020W-B SSL1Q04673 461 aaPredicted RBP3.05□□□□□ -1.92
HTL1YCR020W-B TRP4P07285 380 aaPredicted RBP3.04□□□□□ -1.92
HTL1YCR020W-B ALG7P07286 448 aa3.04□□□□□ -1.92
HTL1YCR020W-B AGP1P25376 633 aa3.04□□□□□ -1.92
HTL1YCR020W-B CDC48P25694 835 aaKnown RBP3.04□□□□□ -1.92
HTL1YCR020W-B AAR2P32357 355 aaPredicted RBP3.04□□□□□ -1.92
HTL1YCR020W-B RPD3P32561 433 aa3.04□□□□□ -1.92
HTL1YCR020W-B TIM44Q01852 431 aa3.04□□□□□ -1.92
HTL1YCR020W-B MUK1Q02866 612 aa3.04□□□□□ -1.92
HTL1YCR020W-B PEX19Q07418 342 aa3.04□□□□□ -1.92
HTL1YCR020W-B ACF2Q12168 779 aa3.04□□□□□ -1.92
HTL1YCR020W-B TRM13Q12383 476 aa3.04□□□□□ -1.92
HTL1YCR020W-B ADE8P04161 214 aa3.03□□□□□ -1.92
HTL1YCR020W-B CLN2P20438 545 aa3.03□□□□□ -1.92
HTL1YCR020W-B STE14P32584 239 aa3.03□□□□□ -1.92
HTL1YCR020W-B YRO2P38079 344 aa3.03□□□□□ -1.92
HTL1YCR020W-B TSL1P38427 1098 aaKnown RBP3.03□□□□□ -1.92
HTL1YCR020W-B LGE1Q02796 332 aaKnown RBP3.03□□□□□ -1.92
HTL1YCR020W-B VPS30Q02948 557 aa3.03□□□□□ -1.92
HTL1YCR020W-B JIP5Q06214 492 aaPredicted RBP3.03□□□□□ -1.92
HTL1YCR020W-B NPP1P25353 742 aa3.02□□□□□ -1.93
HTL1YCR020W-B YIL108WP40483 696 aaKnown RBP3.02□□□□□ -1.93
HTL1YCR020W-B CEP3P40969 608 aa3.02□□□□□ -1.93
HTL1YCR020W-B SLU7Q02775 382 aaKnown RBP3.02□□□□□ -1.93
HTL1YCR020W-B OMS1Q06668 471 aa3.02□□□□□ -1.93
HTL1YCR020W-B OPI10Q08202 246 aa3.02□□□□□ -1.93
HTL1YCR020W-B PPR1P07272 904 aaPredicted RBP3.01□□□□□ -1.93
HTL1YCR020W-B RFA1P22336 621 aaKnown RBP3.01□□□□□ -1.93
HTL1YCR020W-B STE13P33894 931 aa3.01□□□□□ -1.93
HTL1YCR020W-B YKL069WP36088 180 aa3.01□□□□□ -1.93
HTL1YCR020W-B SPC42P36094 363 aa3.01□□□□□ -1.93
HTL1YCR020W-B YKR078WP36158 585 aaKnown RBP3.01□□□□□ -1.93
HTL1YCR020W-B ATF1P40353 525 aa3.01□□□□□ -1.93
HTL1YCR020W-B GUS1P46655 708 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
HTL1YCR020W-B GND2P53319 492 aa3.01□□□□□ -1.93
HTL1YCR020W-B TAF7Q05021 590 aa3.01□□□□□ -1.93
HTL1YCR020W-B IRC10Q08118 586 aa3.01□□□□□ -1.93
HTL1YCR020W-B SEC21P32074 935 aaKnown RBP3□□□□□ -1.93
HTL1YCR020W-B MTH1P35198 433 aa3□□□□□ -1.93
HTL1YCR020W-B QRI1P43123 477 aaKnown RBP3□□□□□ -1.93
HTL1YCR020W-B VPS16Q03308 798 aa3□□□□□ -1.93
HTL1YCR020W-B SWM1Q12379 170 aa3□□□□□ -1.93
HTL1YCR020W-B ERT1P38140 529 aa2.99□□□□□ -1.93
HTL1YCR020W-B PPS1P38148 807 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms