RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W RNT1Q02555 471 aa5.54□□□□□ -1.52
CDC28YBR160W STE11P23561 717 aa5.53□□□□□ -1.52
CDC28YBR160W MSH1P25846 959 aa5.53□□□□□ -1.52
CDC28YBR160W MCM5P29496 775 aaKnown RBP5.53□□□□□ -1.52
CDC28YBR160W SWC3P31376 625 aa5.53□□□□□ -1.52
CDC28YBR160W MFT1P33441 392 aaKnown RBP5.53□□□□□ -1.52
CDC28YBR160W MNR2P35724 969 aa5.53□□□□□ -1.52
CDC28YBR160W RFT1P38206 574 aaPredicted RBP5.53□□□□□ -1.52
CDC28YBR160W EXO5P38289 585 aa5.53□□□□□ -1.52
CDC28YBR160W YHL017WP38745 532 aa5.53□□□□□ -1.52
CDC28YBR160W TFG2P41896 400 aaPredicted RBP5.53□□□□□ -1.52
CDC28YBR160W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
CDC28YBR160W UTP22P53254 1237 aaPredicted RBP5.53□□□□□ -1.52
CDC28YBR160W FAR11P53917 953 aa5.53□□□□□ -1.52
CDC28YBR160W NOG1Q02892 647 aaKnown RBP5.53□□□□□ -1.52
CDC28YBR160W COG4Q06096 861 aa5.53□□□□□ -1.52
CDC28YBR160W SGD1Q06132 899 aa5.53□□□□□ -1.52
CDC28YBR160W OXR1Q08952 273 aa5.53□□□□□ -1.52
CDC28YBR160W SWI1P09547 1314 aa5.52□□□□□ -1.53
CDC28YBR160W HXK1P04806 485 aaKnown RBP5.52□□□□□ -1.53
CDC28YBR160W RDS1P25611 832 aa5.52□□□□□ -1.53
CDC28YBR160W DEP1P31385 405 aa5.52□□□□□ -1.53
CDC28YBR160W FAA3P39002 694 aa5.52□□□□□ -1.53
CDC28YBR160W MAD1P40957 749 aa5.52□□□□□ -1.53
CDC28YBR160W YGL242CP53066 181 aa5.52□□□□□ -1.53
CDC28YBR160W MEC3Q02574 474 aa5.52□□□□□ -1.53
CDC28YBR160W DAL4Q04895 635 aa5.52□□□□□ -1.53
CDC28YBR160W GPA1P08539 472 aa5.51□□□□□ -1.53
CDC28YBR160W CLB1P24868 471 aa5.51□□□□□ -1.53
CDC28YBR160W NUP133P36161 1157 aa5.51□□□□□ -1.53
CDC28YBR160W MAL33P38157 468 aa5.51□□□□□ -1.53
CDC28YBR160W UBP12P39538 1254 aa5.51□□□□□ -1.53
CDC28YBR160W FYV10P40492 516 aa5.51□□□□□ -1.53
CDC28YBR160W CTH1P47976 325 aa5.51□□□□□ -1.53
CDC28YBR160W ALO1P54783 526 aaKnown RBP5.51□□□□□ -1.53
CDC28YBR160W ULP1Q02724 621 aa5.51□□□□□ -1.53
CDC28YBR160W YPL109CQ02981 657 aa5.51□□□□□ -1.53
CDC28YBR160W SML1Q04964 104 aa5.51□□□□□ -1.53
CDC28YBR160W YOR223WQ12015 292 aa5.51□□□□□ -1.53
CDC28YBR160W YOL087CQ99247 1116 aa5.51□□□□□ -1.53
CDC28YBR160W RPL22AP05749 121 aaKnown RBP5.5□□□□□ -1.53
CDC28YBR160W MATALPHA2P0CY08 210 aa5.5□□□□□ -1.53
CDC28YBR160W HMLALPHA2P0CY09 210 aa5.5□□□□□ -1.53
CDC28YBR160W CLN2P20438 545 aa5.5□□□□□ -1.53
CDC28YBR160W SAF1P38352 637 aa5.5□□□□□ -1.53
CDC28YBR160W OCA5P38738 679 aa5.5□□□□□ -1.53
CDC28YBR160W YER130CP39959 443 aa5.5□□□□□ -1.53
CDC28YBR160W RMD1Q03441 430 aa5.5□□□□□ -1.53
CDC28YBR160W SPR28Q04921 423 aa5.5□□□□□ -1.53
CDC28YBR160W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
CDC28YBR160W YLR122CQ12312 125 aa5.5□□□□□ -1.53
CDC28YBR160W GSY2P27472 705 aa5.49□□□□□ -1.53
CDC28YBR160W RRP1P35178 278 aaPredicted RBP5.49□□□□□ -1.53
CDC28YBR160W YKT6P36015 200 aaKnown RBP5.49□□□□□ -1.53
CDC28YBR160W KTR3P38130 404 aaPredicted RBP5.49□□□□□ -1.53
CDC28YBR160W OSH3P38713 996 aaKnown RBP5.49□□□□□ -1.53
CDC28YBR160W NEM1P38757 446 aa5.49□□□□□ -1.53
CDC28YBR160W AKR1P39010 764 aa5.49□□□□□ -1.53
CDC28YBR160W YGL082WP53155 381 aa5.49□□□□□ -1.53
CDC28YBR160W WAR1Q03631 944 aa5.49□□□□□ -1.53
CDC28YBR160W YLR407WQ06070 228 aa5.49□□□□□ -1.53
CDC28YBR160W SLM3Q12093 417 aa5.49□□□□□ -1.53
CDC28YBR160W PGI1P12709 554 aaKnown RBP5.48□□□□□ -1.53
CDC28YBR160W NAM7P30771 971 aaKnown RBP5.48□□□□□ -1.53
CDC28YBR160W MED8P38304 223 aa5.48□□□□□ -1.53
CDC28YBR160W RTT107P38850 1070 aa5.48□□□□□ -1.53
CDC28YBR160W ECM1P39715 212 aa5.48□□□□□ -1.53
CDC28YBR160W RPS26AP39938 119 aaKnown RBP5.48□□□□□ -1.53
CDC28YBR160W RPS26BP39939 119 aaKnown RBP5.48□□□□□ -1.53
CDC28YBR160W PRP31P49704 494 aaPredicted RBP5.48□□□□□ -1.53
CDC28YBR160W YKE2P52553 114 aa5.48□□□□□ -1.53
CDC28YBR160W ADI1Q03677 179 aa5.48□□□□□ -1.53
CDC28YBR160W YMR074CQ04773 145 aa5.48□□□□□ -1.53
CDC28YBR160W YCG1Q06680 1035 aa5.48□□□□□ -1.53
CDC28YBR160W YLL054CQ12244 843 aa5.48□□□□□ -1.53
CDC28YBR160W GIN4Q12263 1142 aa5.48□□□□□ -1.53
CDC28YBR160W YKL068W-AQ3E826 78 aa5.48□□□□□ -1.53
CDC28YBR160W LPD1P09624 499 aaKnown RBP5.47□□□□□ -1.53
CDC28YBR160W RNA1P11745 407 aaKnown RBP5.47□□□□□ -1.53
CDC28YBR160W OPI1P21957 404 aa5.47□□□□□ -1.53
CDC28YBR160W DPB3P27344 201 aa5.47□□□□□ -1.53
CDC28YBR160W COQ2P32378 372 aa5.47□□□□□ -1.53
CDC28YBR160W SRP40P32583 406 aaPredicted RBP5.47□□□□□ -1.53
CDC28YBR160W REI1P38344 393 aaPredicted RBP5.47□□□□□ -1.53
CDC28YBR160W SHU2P38957 223 aa5.47□□□□□ -1.53
CDC28YBR160W VPS41P38959 992 aa5.47□□□□□ -1.53
CDC28YBR160W VAC8P39968 578 aa5.47□□□□□ -1.53
CDC28YBR160W YGL140CP53120 1219 aa5.47□□□□□ -1.53
CDC28YBR160W MAL13P53338 473 aa5.47□□□□□ -1.53
CDC28YBR160W VPS75P53853 264 aa5.47□□□□□ -1.53
CDC28YBR160W ARP5P53946 755 aa5.47□□□□□ -1.53
CDC28YBR160W DOT1Q04089 582 aaKnown RBP5.47□□□□□ -1.53
CDC28YBR160W ESF1Q06344 628 aaKnown RBP5.47□□□□□ -1.53
CDC28YBR160W MAG2Q06436 670 aaKnown RBP5.47□□□□□ -1.53
CDC28YBR160W HEM13P11353 328 aaKnown RBP5.46□□□□□ -1.54
CDC28YBR160W PHO13P19881 312 aa5.46□□□□□ -1.54
CDC28YBR160W MSH3P25336 1018 aa5.46□□□□□ -1.54
CDC28YBR160W YEL043WP32618 956 aa5.46□□□□□ -1.54
CDC28YBR160W GPT2P36148 743 aa5.46□□□□□ -1.54
CDC28YBR160W PXL1P36166 706 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms