RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Ercc6lQ8BHK9 1240 aa15.4■□□□□ 0.06
Prpf40a-206ENSMUST00000209364 Smim5Q8BT42 78 aa15.4■□□□□ 0.06
Prpf40a-206ENSMUST00000209364 Nek4Q9Z1J2 792 aa15.4■□□□□ 0.06
Prpf40a-206ENSMUST00000209364 Grpel1Q99LP6 217 aa15.4■□□□□ 0.06
Prpf40a-206ENSMUST00000209364 Chmp4cQ9D7F7 232 aa15.4■□□□□ 0.06
Prpf40a-206ENSMUST00000209364 Cyp46a1Q9WVK8 500 aa15.4■□□□□ 0.06
Prpf40a-206ENSMUST00000209364 Mindy4Q3UQI9 744 aa15.39■□□□□ 0.06
Prpf40a-206ENSMUST00000209364 Morc2aQ69ZX6 1030 aa15.39■□□□□ 0.06
Prpf40a-206ENSMUST00000209364 Akap11E9Q777 1895 aa15.39■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Cfdp1O88271 295 aaKnown RBP15.39■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Bms1Q6PGF5 1284 aaKnown RBP15.39■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 CenppQ9CZ92 286 aa15.39■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Tiam2Q6ZPF3 1715 aa15.39■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Gm21680A0A0G2JGR8 267 aa15.39■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Cnnm1Q0GA42 951 aa15.39■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Gimap5Q8BWF2 308 aa15.39■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Ube2q2Q8K2Z8 378 aa15.39■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Ddx60E9PZQ1 1711 aa15.39■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Ier5O89113 308 aa15.38■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Gtpbp4Q99ME9 634 aaKnown RBP15.38■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Kif3aP28741 701 aa15.38■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 HellsQ60848 821 aa15.38■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 PigbQ9JJQ0 542 aa15.37■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Mcmdc2E9Q956 681 aa15.37■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Tlr7P58681 1050 aa15.37■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Efcab2Q9CQ46 164 aa15.37■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Eif3aP23116 1344 aaKnown RBP15.37■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Prkab2Q6PAM0 271 aa15.36■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 PappaQ8R4K8 1624 aa15.36■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Anapc15-psA0A140T8L6 141 aa15.36■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Map3k13Q1HKZ5 959 aa15.36■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Igfbp6P47880 238 aa15.35■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Zfp251Q6PCX8 632 aa15.35■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 BbxQ8VBW5 907 aa15.35■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Bicc1Q99MQ1 977 aaKnown RBP15.35■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Fbxo3Q9DC63 480 aa15.35■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Kcnj4P52189 445 aa15.35■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Ints5Q8CHT3 1018 aa15.34■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Bcar3Q9QZK2 820 aa15.34■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Gm45140A0A0N4SUM8 220 aa15.34■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Tceal9Q9DD24 104 aa15.34■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Shank3Q4ACU6 1730 aa15.34■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 AceP09470 1312 aa15.34■□□□□ 0.05
Prpf40a-206ENSMUST00000209364 Shank2Q80Z38 1476 aa15.33■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Ppm1mQ8BU27 406 aa15.33■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Ttll7A4Q9F0 912 aa15.33■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Mum1Q6DID5 682 aa15.33■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Flad1Q8R123 492 aa15.33■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Zkscan2G3X952 960 aa15.32■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Hoxa7P02830 229 aa15.32■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Pdia3P27773 505 aaKnown RBP15.32■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Slc4a10Q5DTL9 1118 aa15.32■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Prdm4Q80V63 803 aa15.32■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Slc39a6Q8C145 765 aa15.32■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Ppp6r3Q922D4 844 aa15.32■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Ybx3Q9JKB3 361 aaKnown RBP15.32■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Zscan25B2RX31 543 aa15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Gm10093D3YYI8 482 aa15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Hdac1O09106 482 aaKnown RBP15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Grm8P47743 908 aa15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Ddx54Q8K4L0 874 aaKnown RBP15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Tgfb1i1Q62219 461 aa15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Ptpdc1Q6NZK8 747 aa15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Bag4Q8CI61 457 aa15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 4931400O07RikQ9D4M5 137 aa15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Zeb2Q9R0G7 1215 aa15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Mrvi1Q9WUX5 899 aaKnown RBP15.31■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Sh3bp1P55194 680 aa15.3■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Nucb1Q02819 459 aaKnown RBP15.3■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 GorabQ8BRM2 368 aa15.3■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Lmbr1lQ9D1E5 489 aa15.3■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Rcan3Q9JKK0 239 aa15.3■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Znf526Q8BI66 675 aa15.3■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Ncbp1Q3UYV9 790 aaKnown RBP15.29■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Kat6bQ8BRB7 1872 aa15.29■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Ankle2Q6P1H6 964 aa15.29■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Bloc1s4Q8VED2 215 aa15.29■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Lrrc59Q922Q8 307 aaKnown RBP15.29■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Q9D2X8 372 aa15.29■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Crb1Q8VHS2 1405 aa15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Col4a1P02463 1669 aa15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Arhgap4B1AUY3 965 aa15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 ImpactO55091 318 aa15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Hspa2P17156 633 aa15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Trim52Q8CDV4 233 aa15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Tfip11Q9ERA6 838 aaKnown RBP15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 MypnQ5DTJ9 1315 aa15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Hmox1P14901 289 aa15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Cct4P80315 539 aaKnown RBP15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Inpp5bQ8K337 993 aa15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Dmrtc1Q9D9R7 182 aa15.28■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Elp1Q7TT37 1333 aaKnown RBP15.27■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Kcnh4A2A5F7 1018 aa15.27■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Ptgs1P22437 602 aa15.27■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 Ppip5k2Q6ZQB6 1129 aa15.27■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 RestQ8VIG1 1082 aa15.27■□□□□ 0.04
Prpf40a-206ENSMUST00000209364 U2af2P26369 475 aaKnown RBP15.27■□□□□ 0.03
Prpf40a-206ENSMUST00000209364 Nfatc2ipO09130 412 aa15.26■□□□□ 0.03
Prpf40a-206ENSMUST00000209364 Anp32cQ64G17 123 aa15.26■□□□□ 0.03
Prpf40a-206ENSMUST00000209364 Bcl11bQ99PV8 884 aa15.26■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms