RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 NischQ80TM9 1593 aa25.43■■□□□ 1.66
Prpf40a-206ENSMUST00000209364 Gm35339A0A140LHH9 1649 aa25.32■■□□□ 1.64
Prpf40a-206ENSMUST00000209364 Abcc9P70170 1546 aa24.71■■□□□ 1.55
Prpf40a-206ENSMUST00000209364 Abcc8B2RUS7 1588 aa24.28■■□□□ 1.48
Prpf40a-206ENSMUST00000209364 Rhox8Q6VSS7 320 aa22.97■■□□□ 1.27
Prpf40a-206ENSMUST00000209364 ScribQ80U72 1612 aa22.87■■□□□ 1.25
Prpf40a-206ENSMUST00000209364 Dcaf1Q80TR8 1506 aa22.62■■□□□ 1.21
Prpf40a-206ENSMUST00000209364 Rtl1Q7M732 1744 aa22.52■■□□□ 1.2
Prpf40a-206ENSMUST00000209364 Kdm5dQ62240 1548 aa22.33■■□□□ 1.16
Prpf40a-206ENSMUST00000209364 Rb1cc1Q9ESK9 1588 aa22.27■■□□□ 1.16
Prpf40a-206ENSMUST00000209364 NacadQ5SWP3 1504 aa22.21■■□□□ 1.15
Prpf40a-206ENSMUST00000209364 Ccdc180J3QNE4 1664 aa22.13■■□□□ 1.13
Prpf40a-206ENSMUST00000209364 Baz1aO88379 1555 aa22■■□□□ 1.11
Prpf40a-206ENSMUST00000209364 Zcchc6Q5BLK4 1491 aaKnown RBP21.76■■□□□ 1.07
Prpf40a-206ENSMUST00000209364 Sycp2Q9CUU3 1500 aa21.74■■□□□ 1.07
Prpf40a-206ENSMUST00000209364 Crybg2B7ZCC2 1516 aa21.7■■□□□ 1.06
Prpf40a-206ENSMUST00000209364 Rpgrip1Q9EPQ2 1331 aa21.6■■□□□ 1.05
Prpf40a-206ENSMUST00000209364 Smarca2Q6DIC0 1577 aa21.48■■□□□ 1.03
Prpf40a-206ENSMUST00000209364 Ccdc136Q3TVA9 1136 aa21.34■■□□□ 1.01
Prpf40a-206ENSMUST00000209364 BicraF8VPZ9 1578 aa21.31■■□□□ 1
Prpf40a-206ENSMUST00000209364 Trim41Q5NCC3 630 aa21■□□□□ 0.95
Prpf40a-206ENSMUST00000209364 Cecr2E9Q2Z1 1453 aa20.99■□□□□ 0.95
Prpf40a-206ENSMUST00000209364 Brd4Q9ESU6 1400 aaKnown RBP20.89■□□□□ 0.93
Prpf40a-206ENSMUST00000209364 HrcG5E8J6 738 aa20.88■□□□□ 0.93
Prpf40a-206ENSMUST00000209364 Synj1Q8CHC4 1574 aa20.78■□□□□ 0.92
Prpf40a-206ENSMUST00000209364 Smarca4Q3TKT4 1613 aaKnown RBP20.73■□□□□ 0.91
Prpf40a-206ENSMUST00000209364 Acin1Q9JIX8 1338 aaKnown RBP20.69■□□□□ 0.9
Prpf40a-206ENSMUST00000209364 CftrP26361 1476 aa20.68■□□□□ 0.9
Prpf40a-206ENSMUST00000209364 Cttnbp2B9EJA2 1648 aa20.66■□□□□ 0.9
Prpf40a-206ENSMUST00000209364 Pcgf6Q99NA9 353 aa20.6■□□□□ 0.89
Prpf40a-206ENSMUST00000209364 Golga3P55937 1487 aa20.53■□□□□ 0.88
Prpf40a-206ENSMUST00000209364 Iqgap2Q3UQ44 1575 aa20.49■□□□□ 0.87
Prpf40a-206ENSMUST00000209364 Cngb1E1AZ71 1325 aa20.47■□□□□ 0.87
Prpf40a-206ENSMUST00000209364 Atad2bE9Q166 1460 aaKnown RBP20.46■□□□□ 0.87
Prpf40a-206ENSMUST00000209364 Cep164Q5DU05 1446 aa20.45■□□□□ 0.86
Prpf40a-206ENSMUST00000209364 Pds5bQ4VA53 1446 aaKnown RBP20.43■□□□□ 0.86
Prpf40a-206ENSMUST00000209364 Top2bQ64511 1612 aa20.43■□□□□ 0.86
Prpf40a-206ENSMUST00000209364 Esf1Q3V1V3 845 aaKnown RBP20.39■□□□□ 0.85
Prpf40a-206ENSMUST00000209364 Rsf1E9PWW9 1441 aaKnown RBP20.35■□□□□ 0.85
Prpf40a-206ENSMUST00000209364 Ccdc88bQ4QRL3 1481 aa20.28■□□□□ 0.84
Prpf40a-206ENSMUST00000209364 Chic1Q8CBW7 227 aa20.26■□□□□ 0.83
Prpf40a-206ENSMUST00000209364 Cc2d2aQ8CFW7 1633 aa20.23■□□□□ 0.83
Prpf40a-206ENSMUST00000209364 Wdr62Q3U3T8 1523 aa20.14■□□□□ 0.81
Prpf40a-206ENSMUST00000209364 Frmpd1A2AKB4 1549 aa20.11■□□□□ 0.81
Prpf40a-206ENSMUST00000209364 Fmn1Q05860 1466 aa20.09■□□□□ 0.81
Prpf40a-206ENSMUST00000209364 Ercc6F8VPZ5 1481 aa20.06■□□□□ 0.8
Prpf40a-206ENSMUST00000209364 Unc13aQ4KUS2 1712 aa19.97■□□□□ 0.79
Prpf40a-206ENSMUST00000209364 Las1lA2BE28 776 aaKnown RBP19.97■□□□□ 0.79
Prpf40a-206ENSMUST00000209364 Gab3Q8BSM5 595 aa19.96■□□□□ 0.79
Prpf40a-206ENSMUST00000209364 Neurod1Q60867 357 aa19.96■□□□□ 0.79
Prpf40a-206ENSMUST00000209364 Top2aQ01320 1528 aaKnown RBP19.94■□□□□ 0.78
Prpf40a-206ENSMUST00000209364 TnnQ80Z71 1560 aa19.94■□□□□ 0.78
Prpf40a-206ENSMUST00000209364 Ehmt2Q9Z148 1263 aaKnown RBP19.94■□□□□ 0.78
Prpf40a-206ENSMUST00000209364 Thoc2B1AZI6 1594 aaKnown RBP19.93■□□□□ 0.78
Prpf40a-206ENSMUST00000209364 Supt5hO55201 1082 aaKnown RBP19.85■□□□□ 0.77
Prpf40a-206ENSMUST00000209364 Lamc3Q9R0B6 1581 aa19.85■□□□□ 0.77
Prpf40a-206ENSMUST00000209364 Myt1Q8CFC2 1127 aa19.76■□□□□ 0.75
Prpf40a-206ENSMUST00000209364 Rapgef2Q8CHG7 1496 aa19.76■□□□□ 0.75
Prpf40a-206ENSMUST00000209364 Phldb1Q6PDH0 1371 aaKnown RBP19.72■□□□□ 0.75
Prpf40a-206ENSMUST00000209364 Kif15Q6P9L6 1387 aa19.72■□□□□ 0.75
Prpf40a-206ENSMUST00000209364 CenpbP27790 599 aa19.68■□□□□ 0.74
Prpf40a-206ENSMUST00000209364 Fam135aQ6NS59 1506 aa19.67■□□□□ 0.74
Prpf40a-206ENSMUST00000209364 Camsap1A2AHC3 1581 aa19.63■□□□□ 0.73
Prpf40a-206ENSMUST00000209364 1700123L14RikQ3V2K7 440 aa19.62■□□□□ 0.73
Prpf40a-206ENSMUST00000209364 Cep162Q6ZQ06 1403 aa19.58■□□□□ 0.72
Prpf40a-206ENSMUST00000209364 Eif4g1Q6NZJ6 1600 aaKnown RBP19.55■□□□□ 0.72
Prpf40a-206ENSMUST00000209364 Ccdc18Q640L5 1455 aa19.53■□□□□ 0.72
Prpf40a-206ENSMUST00000209364 DiexfQ8BTT6 772 aaKnown RBP19.52■□□□□ 0.72
Prpf40a-206ENSMUST00000209364 Ubl4bQ9CQ84 188 aa19.51■□□□□ 0.71
Prpf40a-206ENSMUST00000209364 Npm2Q80W85 207 aa19.48■□□□□ 0.71
Prpf40a-206ENSMUST00000209364 Il27Q8K3I6 234 aa19.48■□□□□ 0.71
Prpf40a-206ENSMUST00000209364 Cux2P70298 1426 aa19.48■□□□□ 0.71
Prpf40a-206ENSMUST00000209364 NrkQ9R0G8 1455 aa19.46■□□□□ 0.71
Prpf40a-206ENSMUST00000209364 PtprkP35822 1457 aa19.46■□□□□ 0.71
Prpf40a-206ENSMUST00000209364 Grin2bQ01097 1482 aa19.44■□□□□ 0.7
Prpf40a-206ENSMUST00000209364 Shroom4Q1W617 1475 aa19.44■□□□□ 0.7
Prpf40a-206ENSMUST00000209364 Arhgap35Q91YM2 1499 aa19.38■□□□□ 0.69
Prpf40a-206ENSMUST00000209364 Myt1lP97500 1187 aa19.37■□□□□ 0.69
Prpf40a-206ENSMUST00000209364 Baz1bQ9Z277 1479 aa19.36■□□□□ 0.69
Prpf40a-206ENSMUST00000209364 Csrnp3P59055 597 aa19.32■□□□□ 0.68
Prpf40a-206ENSMUST00000209364 Npm1Q61937 292 aaKnown RBP19.32■□□□□ 0.68
Prpf40a-206ENSMUST00000209364 Map3k1P53349 1493 aa19.29■□□□□ 0.68
Prpf40a-206ENSMUST00000209364 Anks4bQ8K3X6 423 aa19.28■□□□□ 0.68
Prpf40a-206ENSMUST00000209364 LrpprcQ6PB66 1392 aaKnown RBP19.27■□□□□ 0.68
Prpf40a-206ENSMUST00000209364 Dnajc5bQ9CQ94 199 aa19.24■□□□□ 0.67
Prpf40a-206ENSMUST00000209364 PogzQ8BZH4 1409 aaKnown RBP19.24■□□□□ 0.67
Prpf40a-206ENSMUST00000209364 Mroh2bQ7M6Y6 1581 aa19.23■□□□□ 0.67
Prpf40a-206ENSMUST00000209364 Mrc2Q64449 1479 aa19.22■□□□□ 0.67
Prpf40a-206ENSMUST00000209364 Efcab5A0JP43 1406 aa19.22■□□□□ 0.67
Prpf40a-206ENSMUST00000209364 Duox2A2AQ99 1517 aa19.2■□□□□ 0.66
Prpf40a-206ENSMUST00000209364 Bcl11aQ9QYE3 773 aa19.18■□□□□ 0.66
Prpf40a-206ENSMUST00000209364 Clip1Q922J3 1391 aa19.18■□□□□ 0.66
Prpf40a-206ENSMUST00000209364 Kif21aQ9QXL2 1672 aa19.16■□□□□ 0.66
Prpf40a-206ENSMUST00000209364 AqrQ8CFQ3 1481 aaKnown RBP19.14■□□□□ 0.65
Prpf40a-206ENSMUST00000209364 Dhx29Q6PGC1 1365 aaKnown RBP19.14■□□□□ 0.65
Prpf40a-206ENSMUST00000209364 Aplp2Q06335 707 aa19.13■□□□□ 0.65
Prpf40a-206ENSMUST00000209364 Zeb1Q64318 1117 aa19.13■□□□□ 0.65
Prpf40a-206ENSMUST00000209364 Samd9lQ69Z37 1561 aa19.1■□□□□ 0.65
Prpf40a-206ENSMUST00000209364 Eea1Q8BL66 1411 aa19.1■□□□□ 0.65
Prpf40a-206ENSMUST00000209364 Crocc2F6XLV1 1638 aa19.09■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 497.4 ms