Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Gm25239-201ENSMUST00000174915 86 ntBASIC35.45■■■■□ 3.27
Prdm4Q80V63 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Prdm4Q80V63 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Prdm4Q80V63 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Prdm4Q80V63 Psd-208ENSMUST00000224556 2034 ntBASIC32.85■■■□□ 2.85
Prdm4Q80V63 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.76■■■□□ 2.83
Prdm4Q80V63 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Prdm4Q80V63 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Prdm4Q80V63 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Prdm4Q80V63 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Prdm4Q80V63 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Prdm4Q80V63 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Prdm4Q80V63 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Prdm4Q80V63 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Prdm4Q80V63 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Prdm4Q80V63 Gm15042-201ENSMUST00000120212 883 ntBASIC31.5■■■□□ 2.63
Prdm4Q80V63 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Prdm4Q80V63 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Prdm4Q80V63 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Prdm4Q80V63 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Prdm4Q80V63 Gm15045-201ENSMUST00000117359 883 ntBASIC30.85■■■□□ 2.53
Prdm4Q80V63 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.69■■■□□ 2.5
Prdm4Q80V63 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Prdm4Q80V63 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Prdm4Q80V63 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Prdm4Q80V63 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Prdm4Q80V63 Gm24109-201ENSMUST00000175489 103 ntBASIC30.49■■■□□ 2.47
Prdm4Q80V63 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Prdm4Q80V63 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Prdm4Q80V63 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Prdm4Q80V63 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Prdm4Q80V63 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Prdm4Q80V63 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Prdm4Q80V63 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
Prdm4Q80V63 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.18■■■□□ 2.42
Prdm4Q80V63 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.41
Prdm4Q80V63 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.07■■■□□ 2.4
Prdm4Q80V63 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Prdm4Q80V63 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Prdm4Q80V63 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Prdm4Q80V63 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Prdm4Q80V63 Gm23366-201ENSMUST00000175022 89 ntBASIC29.76■■■□□ 2.35
Prdm4Q80V63 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Prdm4Q80V63 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Prdm4Q80V63 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Prdm4Q80V63 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Prdm4Q80V63 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.56■■■□□ 2.32
Prdm4Q80V63 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Prdm4Q80V63 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.52■■■□□ 2.32
Prdm4Q80V63 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Prdm4Q80V63 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Prdm4Q80V63 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
Prdm4Q80V63 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.4■■■□□ 2.3
Prdm4Q80V63 Zxda-201ENSMUST00000117281 2621 ntBASIC29.38■■■□□ 2.29
Prdm4Q80V63 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Prdm4Q80V63 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Prdm4Q80V63 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Prdm4Q80V63 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Prdm4Q80V63 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Prdm4Q80V63 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
Prdm4Q80V63 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Prdm4Q80V63 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Prdm4Q80V63 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Prdm4Q80V63 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Prdm4Q80V63 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.19■■■□□ 2.26
Prdm4Q80V63 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Prdm4Q80V63 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Prdm4Q80V63 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Prdm4Q80V63 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.04■■■□□ 2.24
Prdm4Q80V63 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Prdm4Q80V63 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Prdm4Q80V63 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Prdm4Q80V63 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Prdm4Q80V63 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Prdm4Q80V63 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.84■■■□□ 2.21
Prdm4Q80V63 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Prdm4Q80V63 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Prdm4Q80V63 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Prdm4Q80V63 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.7■■■□□ 2.19
Prdm4Q80V63 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Prdm4Q80V63 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Prdm4Q80V63 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
Prdm4Q80V63 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Prdm4Q80V63 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Prdm4Q80V63 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.61■■■□□ 2.17
Prdm4Q80V63 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Prdm4Q80V63 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
Prdm4Q80V63 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Prdm4Q80V63 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Prdm4Q80V63 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Prdm4Q80V63 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Prdm4Q80V63 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.4■■■□□ 2.14
Prdm4Q80V63 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Prdm4Q80V63 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Prdm4Q80V63 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.26■■■□□ 2.11
Prdm4Q80V63 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Prdm4Q80V63 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.24■■■□□ 2.11
Prdm4Q80V63 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Prdm4Q80V63 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Prdm4Q80V63 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms