Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Gm25239-201ENSMUST00000174915 86 ntBASIC35.45■■■■□ 3.27
Prdm4Q80V63 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Prdm4Q80V63 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Prdm4Q80V63 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Prdm4Q80V63 Psd-208ENSMUST00000224556 2034 ntBASIC32.85■■■□□ 2.85
Prdm4Q80V63 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.76■■■□□ 2.83
Prdm4Q80V63 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Prdm4Q80V63 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Prdm4Q80V63 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Prdm4Q80V63 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Prdm4Q80V63 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Prdm4Q80V63 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Prdm4Q80V63 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Prdm4Q80V63 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Prdm4Q80V63 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Prdm4Q80V63 Gm15042-201ENSMUST00000120212 883 ntBASIC31.5■■■□□ 2.63
Prdm4Q80V63 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Prdm4Q80V63 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Prdm4Q80V63 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Prdm4Q80V63 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Prdm4Q80V63 Gm15045-201ENSMUST00000117359 883 ntBASIC30.85■■■□□ 2.53
Prdm4Q80V63 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.69■■■□□ 2.5
Prdm4Q80V63 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Prdm4Q80V63 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Prdm4Q80V63 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Prdm4Q80V63 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Prdm4Q80V63 Gm24109-201ENSMUST00000175489 103 ntBASIC30.49■■■□□ 2.47
Prdm4Q80V63 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Prdm4Q80V63 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Prdm4Q80V63 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Prdm4Q80V63 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Prdm4Q80V63 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Prdm4Q80V63 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Prdm4Q80V63 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
Prdm4Q80V63 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.18■■■□□ 2.42
Prdm4Q80V63 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.41
Prdm4Q80V63 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.07■■■□□ 2.4
Prdm4Q80V63 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Prdm4Q80V63 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Prdm4Q80V63 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Prdm4Q80V63 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Prdm4Q80V63 Gm23366-201ENSMUST00000175022 89 ntBASIC29.76■■■□□ 2.35
Prdm4Q80V63 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Prdm4Q80V63 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Prdm4Q80V63 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Prdm4Q80V63 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Prdm4Q80V63 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.56■■■□□ 2.32
Prdm4Q80V63 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Prdm4Q80V63 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.52■■■□□ 2.32
Prdm4Q80V63 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Prdm4Q80V63 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Prdm4Q80V63 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
Prdm4Q80V63 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.4■■■□□ 2.3
Prdm4Q80V63 Zxda-201ENSMUST00000117281 2621 ntBASIC29.38■■■□□ 2.29
Prdm4Q80V63 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Prdm4Q80V63 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Prdm4Q80V63 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Prdm4Q80V63 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Prdm4Q80V63 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Prdm4Q80V63 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
Prdm4Q80V63 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Prdm4Q80V63 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Prdm4Q80V63 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Prdm4Q80V63 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Prdm4Q80V63 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.19■■■□□ 2.26
Prdm4Q80V63 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Prdm4Q80V63 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Prdm4Q80V63 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Prdm4Q80V63 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.04■■■□□ 2.24
Prdm4Q80V63 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Prdm4Q80V63 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Prdm4Q80V63 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Prdm4Q80V63 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Prdm4Q80V63 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Prdm4Q80V63 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.84■■■□□ 2.21
Prdm4Q80V63 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Prdm4Q80V63 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Prdm4Q80V63 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Prdm4Q80V63 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.7■■■□□ 2.19
Prdm4Q80V63 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Prdm4Q80V63 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Prdm4Q80V63 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
Prdm4Q80V63 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Prdm4Q80V63 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Prdm4Q80V63 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.61■■■□□ 2.17
Prdm4Q80V63 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Prdm4Q80V63 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
Prdm4Q80V63 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Prdm4Q80V63 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Prdm4Q80V63 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Prdm4Q80V63 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Prdm4Q80V63 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.4■■■□□ 2.14
Prdm4Q80V63 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Prdm4Q80V63 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Prdm4Q80V63 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.26■■■□□ 2.11
Prdm4Q80V63 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Prdm4Q80V63 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.24■■■□□ 2.11
Prdm4Q80V63 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Prdm4Q80V63 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Prdm4Q80V63 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms