Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Gm25239-201ENSMUST00000174915 86 ntBASIC35,45■■■■□ 3,27
Prdm4Q80V63 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35,11■■■■□ 3,21
Prdm4Q80V63 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34,32■■■■□ 3,08
Prdm4Q80V63 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34,2■■■■□ 3,07
Prdm4Q80V63 Psd-208ENSMUST00000224556 2034 ntBASIC32,85■■■□□ 2,85
Prdm4Q80V63 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32,76■■■□□ 2,83
Prdm4Q80V63 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,51■■■□□ 2,79
Prdm4Q80V63 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32,24■■■□□ 2,75
Prdm4Q80V63 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,08■■■□□ 2,73
Prdm4Q80V63 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31,78■■■□□ 2,68
Prdm4Q80V63 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31,72■■■□□ 2,67
Prdm4Q80V63 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31,68■■■□□ 2,66
Prdm4Q80V63 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31,68■■■□□ 2,66
Prdm4Q80V63 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31,68■■■□□ 2,66
Prdm4Q80V63 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31,67■■■□□ 2,66
Prdm4Q80V63 Gm15042-201ENSMUST00000120212 883 ntBASIC31,5■■■□□ 2,63
Prdm4Q80V63 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31,42■■■□□ 2,62
Prdm4Q80V63 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31,4■■■□□ 2,62
Prdm4Q80V63 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31,17■■■□□ 2,58
Prdm4Q80V63 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31,03■■■□□ 2,56
Prdm4Q80V63 Gm15045-201ENSMUST00000117359 883 ntBASIC30,85■■■□□ 2,53
Prdm4Q80V63 Gm42596-201ENSMUST00000196305 1958 ntBASIC30,69■■■□□ 2,5
Prdm4Q80V63 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Prdm4Q80V63 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Prdm4Q80V63 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,53■■■□□ 2,48
Prdm4Q80V63 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Prdm4Q80V63 Gm24109-201ENSMUST00000175489 103 ntBASIC30,49■■■□□ 2,47
Prdm4Q80V63 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30,48■■■□□ 2,47
Prdm4Q80V63 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Prdm4Q80V63 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Prdm4Q80V63 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Prdm4Q80V63 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Prdm4Q80V63 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30,22■■■□□ 2,43
Prdm4Q80V63 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30,21■■■□□ 2,43
Prdm4Q80V63 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30,18■■■□□ 2,42
Prdm4Q80V63 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,07■■■□□ 2,41
Prdm4Q80V63 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30,07■■■□□ 2,4
Prdm4Q80V63 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Prdm4Q80V63 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,95■■■□□ 2,39
Prdm4Q80V63 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC29,88■■■□□ 2,37
Prdm4Q80V63 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29,8■■■□□ 2,36
Prdm4Q80V63 Gm23366-201ENSMUST00000175022 89 ntBASIC29,76■■■□□ 2,35
Prdm4Q80V63 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,35
Prdm4Q80V63 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
Prdm4Q80V63 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,71■■■□□ 2,35
Prdm4Q80V63 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,58■■■□□ 2,33
Prdm4Q80V63 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29,56■■■□□ 2,32
Prdm4Q80V63 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Prdm4Q80V63 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29,52■■■□□ 2,32
Prdm4Q80V63 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,5■■■□□ 2,31
Prdm4Q80V63 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29,43■■■□□ 2,3
Prdm4Q80V63 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29,4■■■□□ 2,3
Prdm4Q80V63 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,4■■■□□ 2,3
Prdm4Q80V63 Zxda-201ENSMUST00000117281 2621 ntBASIC29,38■■■□□ 2,29
Prdm4Q80V63 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,38■■■□□ 2,29
Prdm4Q80V63 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29,36■■■□□ 2,29
Prdm4Q80V63 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,31■■■□□ 2,28
Prdm4Q80V63 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29,29■■■□□ 2,28
Prdm4Q80V63 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29,28■■■□□ 2,28
Prdm4Q80V63 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29,27■■■□□ 2,28
Prdm4Q80V63 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29,27■■■□□ 2,28
Prdm4Q80V63 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Prdm4Q80V63 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Prdm4Q80V63 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29,21■■■□□ 2,27
Prdm4Q80V63 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29,19■■■□□ 2,26
Prdm4Q80V63 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Prdm4Q80V63 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29,06■■■□□ 2,24
Prdm4Q80V63 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29,05■■■□□ 2,24
Prdm4Q80V63 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29,04■■■□□ 2,24
Prdm4Q80V63 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29,03■■■□□ 2,24
Prdm4Q80V63 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,24
Prdm4Q80V63 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28,89■■■□□ 2,22
Prdm4Q80V63 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28,89■■■□□ 2,21
Prdm4Q80V63 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Prdm4Q80V63 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,84■■■□□ 2,21
Prdm4Q80V63 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Prdm4Q80V63 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Prdm4Q80V63 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,74■■■□□ 2,19
Prdm4Q80V63 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28,7■■■□□ 2,19
Prdm4Q80V63 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28,69■■■□□ 2,18
Prdm4Q80V63 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28,66■■■□□ 2,18
Prdm4Q80V63 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28,65■■■□□ 2,18
Prdm4Q80V63 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28,64■■■□□ 2,18
Prdm4Q80V63 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Prdm4Q80V63 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28,61■■■□□ 2,17
Prdm4Q80V63 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28,57■■■□□ 2,16
Prdm4Q80V63 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28,56■■■□□ 2,16
Prdm4Q80V63 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28,55■■■□□ 2,16
Prdm4Q80V63 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Prdm4Q80V63 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Prdm4Q80V63 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Prdm4Q80V63 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28,4■■■□□ 2,14
Prdm4Q80V63 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28,36■■■□□ 2,13
Prdm4Q80V63 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28,3■■■□□ 2,12
Prdm4Q80V63 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28,26■■■□□ 2,11
Prdm4Q80V63 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28,24■■■□□ 2,11
Prdm4Q80V63 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28,24■■■□□ 2,11
Prdm4Q80V63 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Prdm4Q80V63 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28,23■■■□□ 2,11
Prdm4Q80V63 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28,21■■■□□ 2,11
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms