RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Prdm11A2AGX3 565 aa11.58□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Setdb2Q8C267 713 aa11.58□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Lysmd1Q9D0E3 226 aa11.58□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Pdzd9Q9D9M4 266 aa11.58□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Ripk3Q9QZL0 486 aa11.58□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Llgl2Q3TJ91 1027 aa11.57□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Thrap3Q569Z6 951 aaKnown RBP11.57□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 DiexfQ8BTT6 772 aaKnown RBP11.57□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Glis2Q8VDL9 521 aa11.57□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Ssfa2Q922B9 1252 aa11.57□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Adamts19P59509 1210 aa11.56□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Olfr247E9PVJ7 320 aa11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Ankrd65F6YK91 380 aa11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Olfr819K7N727 320 aa11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Dnm1lQ8K1M6 742 aa11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Kcnc4Q8R1C0 628 aa11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Ubxn2aQ99KJ0 258 aa11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Nsfl1cQ9CZ44 370 aaKnown RBP11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Mkrn1Q9QXP6 481 aa11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Tnnt3Q9QZ47 272 aa11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Zfp831A2ADM8 1628 aa11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Ubn2Q80WC1 1314 aa11.55□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Pdzrn4E9PUZ9 1014 aa11.54□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Dpf2Q61103 391 aaKnown RBP11.54□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Clcn1Q64347 994 aa11.54□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Trip6Q9Z1Y4 480 aa11.54□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Col5a2Q3U962 1497 aa11.54□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Apba1B2RUJ5 842 aa11.53□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Eif4a2P10630 407 aa11.53□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Kndc1Q0KK55 1742 aa11.52□□□□□ -0.56
Pdlim5-209ENSMUST00000196908 Nup188Q6ZQH8 1759 aa11.52□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Dcdc2bF7BCK0 340 aa11.52□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Strn4P58404 760 aa11.52□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Soga3Q6NZL0 945 aa11.52□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Flt4P35917 1363 aa11.52□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 IbtkQ6ZPR6 1352 aaKnown RBP11.52□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 MpripP97434 1024 aa11.51□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Zfp646Q6NV66 1788 aa11.5□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Ccdc155Q80VJ8 648 aa11.5□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Plin1Q8CGN5 517 aa11.5□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Ambra1A2AH22 1300 aa11.5□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Syde2E9PUP1 1314 aa11.5□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 AceP09470 1312 aa11.5□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Trpm7Q923J1 1863 aa11.5□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Hoxa2P31245 372 aa11.49□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Csrnp3P59055 597 aa11.49□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Zbtb1Q91VL9 713 aa11.49□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Slc24a1Q91WD8 1130 aa11.49□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Ptf1aQ9QX98 324 aa11.49□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Zc3h15Q3TIV5 426 aaKnown RBP11.48□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Plekhg5Q66T02 1073 aa11.48□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Cwc22Q8C5N3 908 aaKnown RBP11.48□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 PnisrA2AJT4 805 aaKnown RBP11.47□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Pou3f3P31361 497 aa11.47□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Lrch1P62046 709 aa11.47□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Mansc4Q3UU94 337 aa11.47□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Gsdma3Q5Y4Y6 464 aa11.47□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Foxn1Q61575 648 aa11.47□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Arid3aQ62431 601 aa11.47□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Vil1Q62468 827 aa11.47□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Ttc5Q99LG4 440 aa11.47□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 St5Q924W7 1134 aa11.46□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Efcab2Q9CQ46 164 aa11.46□□□□□ -0.57
Pdlim5-209ENSMUST00000196908 Flt1P35969 1333 aa11.45□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Podnl1Q6P3Y9 559 aa11.45□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Otop3Q80UF9 577 aa11.45□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Pbx4Q99NE9 378 aa11.45□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Nip7Q9CXK8 180 aaKnown RBP11.45□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Aox2Q5SGK3 1345 aa11.44□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Map3k9Q3U1V8 1077 aa11.44□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Angel2Q8K1C0 544 aa11.44□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Brpf1B2RRD7 1212 aa11.43□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Nkx2-3P97334 362 aa11.43□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 HypkQ9CR41 129 aa11.43□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Amotl1Q9D4H4 968 aa11.43□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Nap1l5Q9JJF0 156 aa11.43□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Dpf1Q9QX66 387 aa11.43□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Scn11aQ9R053 1765 aa11.43□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Scn9aQ62205 1984 aa11.42□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Gm42688A0A0R3P9D1 673 aa11.42□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Sptlc1O35704 473 aa11.42□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Fhdc1Q3ULZ2 1149 aa11.42□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Atp2b4Q6Q477 1205 aa11.42□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Ccdc142Q8CAI1 738 aa11.42□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Rapgef4Q9EQZ6 1011 aa11.42□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Tox2A2A472 547 aa11.41□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Prpmp5E9PXN1 296 aa11.41□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Eif6O55135 245 aa11.41□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Csf1rP09581 977 aa11.41□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 B230104I21RikQ3USW4 141 aa11.41□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Iffo2Q8R2V2 512 aa11.41□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Tm4sf4Q91XD3 202 aa11.41□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Dpp7Q9ET22 506 aa11.41□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Dclk1Q9JLM8 756 aa11.41□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Spef2Q8C9J3 1734 aa11.4□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Glt1d1A4FUP9 346 aa11.4□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Sox10Q04888 466 aa11.4□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Pappa2E9PZ87 1789 aa11.4□□□□□ -0.58
Pdlim5-209ENSMUST00000196908 Nav1Q8CH77 1875 aa11.4□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 976.3 ms