RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Mapk8ip2Q9ERE9 830 aa26.63■■□□□ 1.85
Pdlim5-209ENSMUST00000196908 Chic1Q8CBW7 227 aa26.09■■□□□ 1.77
Pdlim5-209ENSMUST00000196908 Phf23Q8BSN5 401 aa23.37■■□□□ 1.33
Pdlim5-209ENSMUST00000196908 Gab3Q8BSM5 595 aa21.99■■□□□ 1.11
Pdlim5-209ENSMUST00000196908 Plppr3Q7TPB0 716 aa21.6■■□□□ 1.05
Pdlim5-209ENSMUST00000196908 Senp3Q9EP97 568 aaKnown RBP20.99■□□□□ 0.95
Pdlim5-209ENSMUST00000196908 Gm35339A0A140LHH9 1649 aa20.49■□□□□ 0.87
Pdlim5-209ENSMUST00000196908 Fam163aQ8CAA5 168 aa20.19■□□□□ 0.82
Pdlim5-209ENSMUST00000196908 Abcc9P70170 1546 aa20.14■□□□□ 0.81
Pdlim5-209ENSMUST00000196908 NischQ80TM9 1593 aa20■□□□□ 0.79
Pdlim5-209ENSMUST00000196908 Abcc8B2RUS7 1588 aa19.55■□□□□ 0.72
Pdlim5-209ENSMUST00000196908 ScribQ80U72 1612 aa19.32■□□□□ 0.68
Pdlim5-209ENSMUST00000196908 Dnajc5bQ9CQ94 199 aa19.01■□□□□ 0.63
Pdlim5-209ENSMUST00000196908 Kcna4Q61423 654 aa18.92■□□□□ 0.62
Pdlim5-209ENSMUST00000196908 Hoxd11P23813 323 aa18.88■□□□□ 0.61
Pdlim5-209ENSMUST00000196908 NacadQ5SWP3 1504 aa18.62■□□□□ 0.57
Pdlim5-209ENSMUST00000196908 Kdm5dQ62240 1548 aa18.52■□□□□ 0.56
Pdlim5-209ENSMUST00000196908 Trap1aP19473 224 aa18.45■□□□□ 0.54
Pdlim5-209ENSMUST00000196908 ArsiQ32KI9 573 aa18.37■□□□□ 0.53
Pdlim5-209ENSMUST00000196908 Znf219Q6IQX8 726 aa18.32■□□□□ 0.52
Pdlim5-209ENSMUST00000196908 Sycp2Q9CUU3 1500 aa18.29■□□□□ 0.52
Pdlim5-209ENSMUST00000196908 BicraF8VPZ9 1578 aa18.17■□□□□ 0.5
Pdlim5-209ENSMUST00000196908 Dnajc5P60904 198 aa17.98■□□□□ 0.47
Pdlim5-209ENSMUST00000196908 Thoc2B1AZI6 1594 aaKnown RBP17.96■□□□□ 0.47
Pdlim5-209ENSMUST00000196908 Pds5bQ4VA53 1446 aaKnown RBP17.86■□□□□ 0.45
Pdlim5-209ENSMUST00000196908 GapdhsQ64467 440 aa17.85■□□□□ 0.45
Pdlim5-209ENSMUST00000196908 Slc34a2Q9DBP0 697 aa17.81■□□□□ 0.44
Pdlim5-209ENSMUST00000196908 Dcaf1Q80TR8 1506 aa17.78■□□□□ 0.44
Pdlim5-209ENSMUST00000196908 Cc2d2aQ8CFW7 1633 aa17.69■□□□□ 0.42
Pdlim5-209ENSMUST00000196908 Chrna2Q91X60 512 aa17.63■□□□□ 0.41
Pdlim5-209ENSMUST00000196908 Rsph4aQ8BYM7 716 aa17.59■□□□□ 0.41
Pdlim5-209ENSMUST00000196908 Trim41Q5NCC3 630 aa17.57■□□□□ 0.4
Pdlim5-209ENSMUST00000196908 Atad2bE9Q166 1460 aaKnown RBP17.51■□□□□ 0.39
Pdlim5-209ENSMUST00000196908 Ercc6F8VPZ5 1481 aa17.49■□□□□ 0.39
Pdlim5-209ENSMUST00000196908 Rimbp2Q80U40 1072 aa17.42■□□□□ 0.38
Pdlim5-209ENSMUST00000196908 Akt1s1Q9D1F4 257 aa17.42■□□□□ 0.38
Pdlim5-209ENSMUST00000196908 Fam135aQ6NS59 1506 aa17.4■□□□□ 0.38
Pdlim5-209ENSMUST00000196908 Rb1cc1Q9ESK9 1588 aa17.36■□□□□ 0.37
Pdlim5-209ENSMUST00000196908 Smarca2Q6DIC0 1577 aa17.21■□□□□ 0.35
Pdlim5-209ENSMUST00000196908 Phldb1Q6PDH0 1371 aaKnown RBP17.16■□□□□ 0.34
Pdlim5-209ENSMUST00000196908 Ubl4bQ9CQ84 188 aa17.13■□□□□ 0.33
Pdlim5-209ENSMUST00000196908 Baz1bQ9Z277 1479 aa17.11■□□□□ 0.33
Pdlim5-209ENSMUST00000196908 Iqgap2Q3UQ44 1575 aa17.07■□□□□ 0.32
Pdlim5-209ENSMUST00000196908 Frmpd1A2AKB4 1549 aa17.06■□□□□ 0.32
Pdlim5-209ENSMUST00000196908 Crybg2B7ZCC2 1516 aa17.04■□□□□ 0.32
Pdlim5-209ENSMUST00000196908 Wdr62Q3U3T8 1523 aa17.04■□□□□ 0.32
Pdlim5-209ENSMUST00000196908 Zcchc6Q5BLK4 1491 aaKnown RBP17.04■□□□□ 0.32
Pdlim5-209ENSMUST00000196908 Mrc2Q64449 1479 aa17.04■□□□□ 0.32
Pdlim5-209ENSMUST00000196908 Smarca4Q3TKT4 1613 aaKnown RBP17.03■□□□□ 0.32
Pdlim5-209ENSMUST00000196908 Baz1aO88379 1555 aa17.03■□□□□ 0.32
Pdlim5-209ENSMUST00000196908 Dmrt2Q8BG36 561 aa16.83■□□□□ 0.28
Pdlim5-209ENSMUST00000196908 Cecr2E9Q2Z1 1453 aa16.81■□□□□ 0.28
Pdlim5-209ENSMUST00000196908 Ccdc180J3QNE4 1664 aa16.78■□□□□ 0.28
Pdlim5-209ENSMUST00000196908 Shroom2A2ALU4 1481 aa16.72■□□□□ 0.27
Pdlim5-209ENSMUST00000196908 Lrriq1Q0P5X1 1673 aa16.7■□□□□ 0.26
Pdlim5-209ENSMUST00000196908 Unc13aQ4KUS2 1712 aa16.7■□□□□ 0.26
Pdlim5-209ENSMUST00000196908 Rsf1E9PWW9 1441 aaKnown RBP16.69■□□□□ 0.26
Pdlim5-209ENSMUST00000196908 Col17a1Q07563 1470 aa16.68■□□□□ 0.26
Pdlim5-209ENSMUST00000196908 Rhox8Q6VSS7 320 aa16.68■□□□□ 0.26
Pdlim5-209ENSMUST00000196908 Pabpn1Q8CCS6 302 aaKnown RBP16.5■□□□□ 0.23
Pdlim5-209ENSMUST00000196908 Znf704Q9ERQ3 566 aa16.45■□□□□ 0.22
Pdlim5-209ENSMUST00000196908 Eif4g3Q80XI3 1579 aaKnown RBP16.43■□□□□ 0.22
Pdlim5-209ENSMUST00000196908 Atf5O70191 283 aa16.43■□□□□ 0.22
Pdlim5-209ENSMUST00000196908 Pcdh10E9PXQ7 1057 aa16.41■□□□□ 0.22
Pdlim5-209ENSMUST00000196908 Slc4a5E9Q3M5 1116 aa16.4■□□□□ 0.22
Pdlim5-209ENSMUST00000196908 Top2bQ64511 1612 aa16.4■□□□□ 0.22
Pdlim5-209ENSMUST00000196908 Cux2P70298 1426 aa16.39■□□□□ 0.21
Pdlim5-209ENSMUST00000196908 Kif21aQ9QXL2 1672 aa16.39■□□□□ 0.21
Pdlim5-209ENSMUST00000196908 Pelp1Q9DBD5 1123 aaKnown RBP16.37■□□□□ 0.21
Pdlim5-209ENSMUST00000196908 CftrP26361 1476 aa16.24■□□□□ 0.19
Pdlim5-209ENSMUST00000196908 Kif15Q6P9L6 1387 aa16.24■□□□□ 0.19
Pdlim5-209ENSMUST00000196908 Zcchc11B2RX14 1644 aaKnown RBP16.23■□□□□ 0.19
Pdlim5-209ENSMUST00000196908 Hs6st3Q9QYK4 470 aa16.22■□□□□ 0.19
Pdlim5-209ENSMUST00000196908 Npm1Q61937 292 aaKnown RBP16.21■□□□□ 0.19
Pdlim5-209ENSMUST00000196908 Cttnbp2B9EJA2 1648 aa16.2■□□□□ 0.18
Pdlim5-209ENSMUST00000196908 Ppp4r2Q0VGB7 417 aa16.18■□□□□ 0.18
Pdlim5-209ENSMUST00000196908 Urb2E9Q7L1 1524 aaKnown RBP16.17■□□□□ 0.18
Pdlim5-209ENSMUST00000196908 Plb1Q3TTY0 1478 aa16.15■□□□□ 0.18
Pdlim5-209ENSMUST00000196908 Ttbk1Q6PCN3 1308 aa16.15■□□□□ 0.18
Pdlim5-209ENSMUST00000196908 Arhgef5E9Q7D5 1581 aa16.14■□□□□ 0.17
Pdlim5-209ENSMUST00000196908 Synj1Q8CHC4 1574 aa16.13■□□□□ 0.17
Pdlim5-209ENSMUST00000196908 Sox12Q04890 314 aa16.12■□□□□ 0.17
Pdlim5-209ENSMUST00000196908 Bach1P97302 739 aa16.07■□□□□ 0.16
Pdlim5-209ENSMUST00000196908 Esf1Q3V1V3 845 aaKnown RBP16.05■□□□□ 0.16
Pdlim5-209ENSMUST00000196908 Cep164Q5DU05 1446 aa16.04■□□□□ 0.16
Pdlim5-209ENSMUST00000196908 Adgrl3Q80TS3 1537 aa16■□□□□ 0.15
Pdlim5-209ENSMUST00000196908 Dhx29Q6PGC1 1365 aaKnown RBP15.99■□□□□ 0.15
Pdlim5-209ENSMUST00000196908 Brd4Q9ESU6 1400 aaKnown RBP15.98■□□□□ 0.15
Pdlim5-209ENSMUST00000196908 Rusc2Q80U22 1514 aa15.96■□□□□ 0.15
Pdlim5-209ENSMUST00000196908 Lamc3Q9R0B6 1581 aa15.92■□□□□ 0.14
Pdlim5-209ENSMUST00000196908 Il27Q8K3I6 234 aa15.91■□□□□ 0.14
Pdlim5-209ENSMUST00000196908 PtprtQ99M80 1454 aa15.88■□□□□ 0.13
Pdlim5-209ENSMUST00000196908 Gm156Q58A37 223 aa15.87■□□□□ 0.13
Pdlim5-209ENSMUST00000196908 Plekhg3Q4VAC9 1341 aa15.87■□□□□ 0.13
Pdlim5-209ENSMUST00000196908 PtprkP35822 1457 aa15.86■□□□□ 0.13
Pdlim5-209ENSMUST00000196908 Ift140E9PY46 1464 aa15.85■□□□□ 0.13
Pdlim5-209ENSMUST00000196908 Crocc2F6XLV1 1638 aa15.85■□□□□ 0.13
Pdlim5-209ENSMUST00000196908 LrpprcQ6PB66 1392 aaKnown RBP15.8■□□□□ 0.12
Pdlim5-209ENSMUST00000196908 Cep170Q6A065 1588 aa15.79■□□□□ 0.12
Pdlim5-209ENSMUST00000196908 Gapvd1Q6PAR5 1458 aa15.76■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 61.5 ms