RNA–Protein interactions for RNA: ENSMUST00000063006.11

Ccdc42-201, Transcript of Coiled-coil domain-containing protein 42, mousemouse

TSL 5 BASIC

Gene Ccdc42, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42-201ENSMUST00000063006 Clcn6O35454 870 aa11.43□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Hsp90ab1P11499 724 aaKnown RBP11.43□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 SympkQ80X82 1284 aa11.43□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Mylk2Q8VCR8 613 aa11.43□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Armcx1Q9CX83 456 aa11.43□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 CenppQ9CZ92 286 aa11.43□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Tceal9Q9DD24 104 aa11.43□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Nphp1Q9QY53 687 aa11.43□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Flt4P35917 1363 aa11.42□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Rabep1O35551 862 aa11.42□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Irf9Q61179 399 aa11.42□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Ankle2Q6P1H6 964 aa11.42□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Bend3Q6PAL0 825 aa11.42□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 ErfeQ6PGN1 340 aa11.42□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Larp1Q6ZQ58 1072 aaKnown RBP11.42□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Rps6ka4Q9Z2B9 773 aa11.42□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Dlg5E9Q9R9 1921 aa11.41□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Mcmdc2E9Q956 681 aa11.41□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Mmp8O70138 465 aa11.41□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Nkx1-2P42580 305 aa11.41□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Srgap3Q812A2 1099 aa11.41□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Speer4bQ9D9F7 267 aa11.41□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 PappaQ8R4K8 1624 aa11.41□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Ubr2Q6WKZ8 1755 aa11.41□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Gm21663A0A0G2JE01 267 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Gm7361D3Z6R1 267 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 5031410I06RikE9Q4E0 267 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Gm1979E9QAN3 267 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Gm5862K7N5V5 267 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Gm10220K7N660 267 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Fkbp4P30416 458 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 VgfQ0VGU4 617 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Rnf180Q3U827 592 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Prom2Q3UUY6 835 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Ppp1r42Q8R1Z4 357 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Cyp46a1Q9WVK8 500 aa11.4□□□□□ -0.58
Ccdc42-201ENSMUST00000063006 Adcy9P51830 1353 aa11.4□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Zkscan2G3X952 960 aa11.39□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 CanxP35564 591 aaKnown RBP11.39□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Cct4P80315 539 aaKnown RBP11.39□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Mre11Q61216 706 aa11.39□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Msl1Q6PDM1 616 aa11.39□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Gnl3lQ6PGG6 577 aaKnown RBP11.39□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Ppp1r9bQ6R891 817 aaKnown RBP11.39□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Mtfr1lQ9CWE0 289 aa11.39□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Usp21Q9QZL6 566 aa11.39□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Cfdp1O88271 295 aaKnown RBP11.38□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Tnnt1O88346 262 aa11.38□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Ier5O89113 308 aa11.38□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Map3k2Q61083 619 aa11.38□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Ddx58Q6Q899 926 aa11.38□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Ccdc155Q80VJ8 648 aa11.38□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Col23a1Q8K4G2 532 aa11.38□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Cog6Q8R3I3 657 aa11.38□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Pdia6Q922R8 440 aaKnown RBP11.38□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Magea6O89010 325 aa11.37□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Cyp2d11P24457 504 aa11.37□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Cnnm1Q0GA42 951 aa11.37□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Magea3Q6T340 320 aa11.37□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Trim52Q8CDV4 233 aa11.37□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 FanclQ9CR14 375 aa11.37□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 AceP09470 1312 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Igf2rQ07113 2483 aaKnown RBP11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Tjp1P39447 1745 aaKnown RBP11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Atg4a-psA0A0G2JFS9 396 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 MeiocA2AG06 965 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Grm8P47743 908 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Nkx2-3P97334 362 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Pde4dQ01063 747 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Znf692Q3U381 531 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Mphosph10Q810V0 681 aaKnown RBP11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Ppm1mQ8BU27 406 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Trim35Q8C006 501 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Atg4aQ8C9S8 396 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Ppm1fQ8CGA0 452 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Efcab2Q9CQ46 164 aa11.36□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Rnf123Q5XPI3 1314 aa11.35□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Aplp1Q03157 653 aa11.35□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Cwc27Q3TKY6 469 aa11.35□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 ApobrQ8VBT6 942 aa11.35□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Klc3Q91W40 508 aa11.35□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Ubr3Q5U430 1889 aa11.35□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Exoc6bA6H5Z3 810 aa11.34□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Gm10093D3YYI8 482 aa11.34□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Sptbn5F6UCX4 1208 aa11.34□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Hdac1O09106 482 aaKnown RBP11.34□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Tbc1d9Q3UYK3 1264 aa11.34□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 AbraQ8BUZ1 375 aa11.34□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Smc4Q8CG47 1286 aa11.34□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Bicc1Q99MQ1 977 aaKnown RBP11.34□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Sned1Q70E20 1403 aa11.34□□□□□ -0.59
Ccdc42-201ENSMUST00000063006 Col11a2Q64739 1736 aa11.33□□□□□ -0.6
Ccdc42-201ENSMUST00000063006 Bicdl1A0JNT9 577 aa11.33□□□□□ -0.6
Ccdc42-201ENSMUST00000063006 Zap70P43404 618 aa11.33□□□□□ -0.6
Ccdc42-201ENSMUST00000063006 Jdp2P97875 163 aa11.33□□□□□ -0.6
Ccdc42-201ENSMUST00000063006 Ccnl1Q52KE7 532 aaKnown RBP11.33□□□□□ -0.6
Ccdc42-201ENSMUST00000063006 Rbm27Q5SFM8 1060 aaKnown RBP11.33□□□□□ -0.6
Ccdc42-201ENSMUST00000063006 Sumf1Q8R0F3 372 aa11.33□□□□□ -0.6
Ccdc42-201ENSMUST00000063006 Mrps5Q99N87 432 aaKnown RBP11.33□□□□□ -0.6
Ccdc42-201ENSMUST00000063006 Casz1Q9CWL2 1761 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms