RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Ano10Q8BH79 659 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Rai14Q9EP71 979 aaKnown RBP17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Riok1Q922Q2 567 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Ccdc186Q8C9S4 917 aa17.92■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Bloc1s2Q9CWG9 143 aa17.92■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Rbm33Q9CXK9 1231 aaKnown RBP17.92■□□□□ 0.46
Ubr3-201ENSMUST00000055758 2310002L09RikQ9D7L5 217 aa17.92■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Syt10Q9R0N4 523 aa17.92■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Eftud2O08810 971 aaKnown RBP17.92■□□□□ 0.46
Ubr3-201ENSMUST00000055758 GmnnO88513 206 aa17.92■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Brd3Q8K2F0 726 aaKnown RBP17.92■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Chd1lQ9CXF7 900 aa17.92■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Prkar2bP31324 416 aa17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Ankib1Q6ZPS6 1085 aa17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Yeats4Q9CR11 227 aaKnown RBP17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Pip4k2bQ80XI4 416 aa17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Ddx27Q921N6 760 aaKnown RBP17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Cdk19Q8BWD8 501 aa17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Bms1Q6PGF5 1284 aaKnown RBP17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Bicd1Q8BR07 835 aa17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 BlvraQ9CY64 295 aa17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Tshz3Q8CGV9 1081 aa17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Flad1Q8R123 492 aa17.91■□□□□ 0.46
Ubr3-201ENSMUST00000055758 FerP70451 823 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Ccdc38Q8CDN8 563 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Mybbp1aQ7TPV4 1344 aaKnown RBP17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Xab2Q9DCD2 855 aaKnown RBP17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Gm28510A0A087WP28 240 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 VeztQ3ZK22 780 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Snx13Q6PHS6 957 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Samd15F6XZJ7 620 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Rassf4Q8CB96 322 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Rsrc1Q9DBU6 334 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 1700122O11RikJ3QPW6 241 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Top1Q04750 767 aaKnown RBP17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Il1rapl2Q9ERS6 686 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Ift140E9PY46 1464 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Capza3P70190 299 aa17.9■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Gm21698A0A087WQP8 267 aa17.89■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Apol7aB2RT54 418 aa17.89■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Cc2d2aQ8CFW7 1633 aa17.89■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Cyp4f39Q8BGU0 532 aa17.89■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Mroh7A2AVR2 1279 aa17.89■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Prr16A3KMN5 304 aa17.89■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Cetn1P41209 172 aa17.89■□□□□ 0.45
Ubr3-201ENSMUST00000055758 GpkowQ56A08 488 aa17.89■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Fam114a1Q9D281 569 aa17.89■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Syt1P46096 421 aa17.89■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Ccdc122Q8BVN0 290 aa17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 SncbQ91ZZ3 133 aa17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Eef1dP57776 281 aaKnown RBP17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Kiaa1328Q6NZK5 612 aa17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Aldh1l1Q8R0Y6 902 aa17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Mrpl44Q9CY73 333 aaKnown RBP17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Pde4bB1AWC9 736 aa17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Klhl30Q8C3F7 581 aa17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Dync1i1O88485 628 aa17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Pde4cQ3UEI1 686 aa17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 RpgrQ9R0X5 1001 aa17.88■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Gramd4Q8CB44 633 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Psmd6Q99JI4 389 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Dapk3O54784 448 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Synj1Q8CHC4 1574 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Ssx2ipQ8VC66 615 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Ncoa2Q61026 1462 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Cep19Q9CQA8 163 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Cd109Q8R422 1442 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Caprin2Q05A80 1031 aaKnown RBP17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Wwc1Q5SXA9 1104 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Krt7Q9DCV7 457 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Gm28919A0A087WP35 240 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 IqceQ6PCQ0 778 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Capn12Q9ER56 720 aa17.87■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Speer4f2E9Q366 295 aa17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Api5O35841 504 aaKnown RBP17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Brd1E9PZ26 1189 aaKnown RBP17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 KdrP35918 1367 aa17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Hoxa7P02830 229 aa17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Strn4P58404 760 aa17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 SfpqQ8VIJ6 699 aaKnown RBP17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Myom3A2ABU4 1439 aa17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Mtmr3Q8K296 1196 aa17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Erich2E9Q1A6 463 aa17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Ssrp1Q08943 708 aaKnown RBP17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Bag3Q9JLV1 577 aaKnown RBP17.86■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Gm3409A0A0G2JE67 319 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Bicdl1A0JNT9 577 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Efcab5A0JP43 1406 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Aimp1P31230 310 aaKnown RBP17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Ccdc25Q78PG9 208 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Zmat2Q9CPW7 199 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Hs1bp3Q3TC93 395 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Ublcp1Q8BGR9 318 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 CactinQ9CS00 772 aaKnown RBP17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Polr1aO35134 1717 aaKnown RBP17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Tbc1d2bQ3U0J8 965 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Fchsd2Q3USJ8 740 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Rapgef4Q9EQZ6 1011 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Tsga10Q6NY15 697 aa17.85■□□□□ 0.45
Ubr3-201ENSMUST00000055758 Tbc1d8Q9Z1A9 1134 aa17.85■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms