Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Gm25239-201ENSMUST00000174915 86 ntBASIC36.34■■■■□ 3.41
RpgrQ9R0X5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
RpgrQ9R0X5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
RpgrQ9R0X5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RpgrQ9R0X5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RpgrQ9R0X5 Gm15042-201ENSMUST00000120212 883 ntBASIC32.19■■■□□ 2.74
RpgrQ9R0X5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
RpgrQ9R0X5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RpgrQ9R0X5 Gm15045-201ENSMUST00000117359 883 ntBASIC31.44■■■□□ 2.62
RpgrQ9R0X5 Gm24109-201ENSMUST00000175489 103 ntBASIC31.23■■■□□ 2.59
RpgrQ9R0X5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RpgrQ9R0X5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RpgrQ9R0X5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RpgrQ9R0X5 Psd-208ENSMUST00000224556 2034 ntBASIC30.71■■■□□ 2.51
RpgrQ9R0X5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
RpgrQ9R0X5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RpgrQ9R0X5 Gm23366-201ENSMUST00000175022 89 ntBASIC30.52■■■□□ 2.48
RpgrQ9R0X5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.45■■■□□ 2.47
RpgrQ9R0X5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RpgrQ9R0X5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RpgrQ9R0X5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
RpgrQ9R0X5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
RpgrQ9R0X5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RpgrQ9R0X5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RpgrQ9R0X5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
RpgrQ9R0X5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RpgrQ9R0X5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
RpgrQ9R0X5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
RpgrQ9R0X5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.74■■■□□ 2.35
RpgrQ9R0X5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
RpgrQ9R0X5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RpgrQ9R0X5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.52■■■□□ 2.32
RpgrQ9R0X5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RpgrQ9R0X5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.39■■■□□ 2.3
RpgrQ9R0X5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RpgrQ9R0X5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
RpgrQ9R0X5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RpgrQ9R0X5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
RpgrQ9R0X5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
RpgrQ9R0X5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
RpgrQ9R0X5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.96■■■□□ 2.23
RpgrQ9R0X5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.85■■■□□ 2.21
RpgrQ9R0X5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RpgrQ9R0X5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
RpgrQ9R0X5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.73■■■□□ 2.19
RpgrQ9R0X5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.73■■■□□ 2.19
RpgrQ9R0X5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RpgrQ9R0X5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RpgrQ9R0X5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.64■■■□□ 2.18
RpgrQ9R0X5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RpgrQ9R0X5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
RpgrQ9R0X5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RpgrQ9R0X5 Gm25238-201ENSMUST00000174914 89 ntBASIC28.5■■■□□ 2.15
RpgrQ9R0X5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RpgrQ9R0X5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RpgrQ9R0X5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
RpgrQ9R0X5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.41■■■□□ 2.14
RpgrQ9R0X5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RpgrQ9R0X5 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.38■■■□□ 2.13
RpgrQ9R0X5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RpgrQ9R0X5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RpgrQ9R0X5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RpgrQ9R0X5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
RpgrQ9R0X5 Gm27325-201ENSMUST00000175467 74 ntBASIC28.26■■■□□ 2.11
RpgrQ9R0X5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RpgrQ9R0X5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RpgrQ9R0X5 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.2■■■□□ 2.11
RpgrQ9R0X5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.19■■■□□ 2.1
RpgrQ9R0X5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
RpgrQ9R0X5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RpgrQ9R0X5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.11■■■□□ 2.09
RpgrQ9R0X5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RpgrQ9R0X5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
RpgrQ9R0X5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RpgrQ9R0X5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.03■■■□□ 2.08
RpgrQ9R0X5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
RpgrQ9R0X5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
RpgrQ9R0X5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RpgrQ9R0X5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.93■■■□□ 2.06
RpgrQ9R0X5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RpgrQ9R0X5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.91■■■□□ 2.06
RpgrQ9R0X5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
RpgrQ9R0X5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RpgrQ9R0X5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.87■■■□□ 2.05
RpgrQ9R0X5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.86■■■□□ 2.05
RpgrQ9R0X5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
RpgrQ9R0X5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RpgrQ9R0X5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RpgrQ9R0X5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RpgrQ9R0X5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
RpgrQ9R0X5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
RpgrQ9R0X5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
RpgrQ9R0X5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.58■■■□□ 2
RpgrQ9R0X5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RpgrQ9R0X5 Rab21-202ENSMUST00000218831 843 ntBASIC27.56■■■□□ 2
RpgrQ9R0X5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RpgrQ9R0X5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.43■■□□□ 1.98
RpgrQ9R0X5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RpgrQ9R0X5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RpgrQ9R0X5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms