RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	DSE3	Q08729	430 aa		7.54	□□□□□ -1.2
SNT309	YPR101W	CWC2	Q12046	339 aa	Predicted RBP	7.54	□□□□□ -1.2
SNT309	YPR101W	DAS2	Q12084	232 aa		7.54	□□□□□ -1.2
SNT309	YPR101W	TUF1	P02992	437 aa	Known RBP	7.53	□□□□□ -1.2
SNT309	YPR101W	RAD1	P06777	1100 aa		7.53	□□□□□ -1.2
SNT309	YPR101W	MIP1	P15801	1254 aa		7.53	□□□□□ -1.2
SNT309	YPR101W	RPC53	P25441	422 aa		7.53	□□□□□ -1.2
SNT309	YPR101W	PAP1	P29468	568 aa	Known RBP	7.53	□□□□□ -1.2
SNT309	YPR101W	FRD1	P32614	470 aa	Known RBP	7.53	□□□□□ -1.2
SNT309	YPR101W	RPC25	P35718	212 aa		7.53	□□□□□ -1.2
SNT309	YPR101W	SAP1	P39955	897 aa	Known RBP	7.53	□□□□□ -1.2
SNT309	YPR101W	DSN1	P40568	576 aa		7.53	□□□□□ -1.2
SNT309	YPR101W	IES1	P43579	692 aa		7.53	□□□□□ -1.2
SNT309	YPR101W	YJR079W	P47126	109 aa		7.53	□□□□□ -1.2
SNT309	YPR101W	SOV1	Q04748	898 aa		7.53	□□□□□ -1.2
SNT309	YPR101W	SPO75	Q07798	868 aa		7.53	□□□□□ -1.2
SNT309	YPR101W	YOL075C	Q08234	1294 aa		7.53	□□□□□ -1.2
SNT309	YPR101W	TUS1	Q06412	1307 aa		7.52	□□□□□ -1.2
SNT309	YPR101W	PMD1	P32634	1753 aa		7.52	□□□□□ -1.21
SNT309	YPR101W	RAS1	P01119	309 aa		7.52	□□□□□ -1.21
SNT309	YPR101W	MAK16	P10962	306 aa	Predicted RBP	7.52	□□□□□ -1.21
SNT309	YPR101W	SRP54	P20424	541 aa	Known RBP	7.52	□□□□□ -1.21
SNT309	YPR101W	RAD53	P22216	821 aa		7.52	□□□□□ -1.21
SNT309	YPR101W	YKL091C	P33324	310 aa	Known RBP	7.52	□□□□□ -1.21
SNT309	YPR101W	CCM1	P48237	864 aa	Predicted RBP	7.52	□□□□□ -1.21
SNT309	YPR101W	DSE4	P53753	1117 aa		7.52	□□□□□ -1.21
SNT309	YPR101W	MDM1	Q01846	1127 aa		7.52	□□□□□ -1.21
SNT309	YPR101W	VTI1	Q04338	217 aa		7.52	□□□□□ -1.21
SNT309	YPR101W	STE23	Q06010	1027 aa		7.52	□□□□□ -1.21
SNT309	YPR101W	SFH1	Q06168	426 aa		7.52	□□□□□ -1.21
SNT309	YPR101W	IRC3	Q06683	689 aa		7.52	□□□□□ -1.21
SNT309	YPR101W	YOR223W	Q12015	292 aa		7.52	□□□□□ -1.21
SNT309	YPR101W	WRS1	Q12109	432 aa	Known RBP	7.52	□□□□□ -1.21
SNT309	YPR101W	SSB1	P11484	613 aa	Known RBP	7.51	□□□□□ -1.21
SNT309	YPR101W	SIT4	P20604	311 aa		7.51	□□□□□ -1.21
SNT309	YPR101W	PET10	P36139	283 aa		7.51	□□□□□ -1.21
SNT309	YPR101W	YMR124W	P39523	943 aa	Known RBP	7.51	□□□□□ -1.21
SNT309	YPR101W	SSB2	P40150	613 aa	Known RBP	7.51	□□□□□ -1.21
SNT309	YPR101W	APL6	P46682	809 aa		7.51	□□□□□ -1.21
SNT309	YPR101W	SGM1	P47166	707 aa		7.51	□□□□□ -1.21
SNT309	YPR101W	BTN2	P53286	410 aa		7.51	□□□□□ -1.21
SNT309	YPR101W	CWC22	P53333	577 aa	Known RBP	7.51	□□□□□ -1.21
SNT309	YPR101W	BNI5	P53890	448 aa	Known RBP	7.51	□□□□□ -1.21
SNT309	YPR101W	CSM3	Q04659	317 aa		7.51	□□□□□ -1.21
SNT309	YPR101W	SMD2	Q06217	110 aa	Known RBP	7.51	□□□□□ -1.21
SNT309	YPR101W	YLR001C	Q07895	862 aa		7.51	□□□□□ -1.21
SNT309	YPR101W	ISY1	P21374	235 aa	Predicted RBP	7.5	□□□□□ -1.21
SNT309	YPR101W	APL1	P27351	700 aa		7.5	□□□□□ -1.21
SNT309	YPR101W	SEC20	P28791	383 aa		7.5	□□□□□ -1.21
SNT309	YPR101W	GCG1	P32656	232 aa	Known RBP	7.5	□□□□□ -1.21
SNT309	YPR101W	ATG32	P40458	529 aa		7.5	□□□□□ -1.21
SNT309	YPR101W	CBK1	P53894	756 aa		7.5	□□□□□ -1.21
SNT309	YPR101W	KEL3	Q08979	651 aa	Predicted RBP	7.5	□□□□□ -1.21
SNT309	YPR101W	CDC60	P26637	1090 aa	Known RBP	7.49	□□□□□ -1.21
SNT309	YPR101W	OLA1	P38219	394 aa	Known RBP	7.49	□□□□□ -1.21
SNT309	YPR101W	TRS85	P46944	698 aa		7.49	□□□□□ -1.21
SNT309	YPR101W	FOL1	P53848	824 aa		7.49	□□□□□ -1.21
SNT309	YPR101W	VPS30	Q02948	557 aa		7.49	□□□□□ -1.21
SNT309	YPR101W	ADY4	Q05955	493 aa		7.49	□□□□□ -1.21
SNT309	YPR101W	YPR078C	Q06813	372 aa		7.49	□□□□□ -1.21
SNT309	YPR101W	RIX7	Q07844	837 aa	Known RBP	7.49	□□□□□ -1.21
SNT309	YPR101W	MPC54	Q08550	464 aa		7.49	□□□□□ -1.21
SNT309	YPR101W	YPL225W	Q08971	146 aa	Known RBP	7.49	□□□□□ -1.21
SNT309	YPR101W	RIO1	Q12196	484 aa	Known RBP	7.49	□□□□□ -1.21
SNT309	YPR101W	NUC1	P08466	329 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	RNA1	P11745	407 aa	Known RBP	7.48	□□□□□ -1.21
SNT309	YPR101W	GFA1	P14742	717 aa	Known RBP	7.48	□□□□□ -1.21
SNT309	YPR101W	TUP1	P16649	713 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	UBP1	P25037	809 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	SRO9	P25567	434 aa	Known RBP	7.48	□□□□□ -1.21
SNT309	YPR101W	LAS1	P36146	502 aa	Predicted RBP	7.48	□□□□□ -1.21
SNT309	YPR101W	PFF1	P38244	976 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	SPP381	P38282	291 aa	Predicted RBP	7.48	□□□□□ -1.21
SNT309	YPR101W	TOS1	P38288	455 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	ROG3	P43602	733 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	CIT3	P43635	486 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	TOS3	P43637	560 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	YJR039W	P47107	1121 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	ASE1	P50275	885 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	ENV11	P53246	860 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	TOF1	P53840	1238 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	NSG2	P53898	299 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	HPC2	Q01448	625 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	YMR114C	Q04471	368 aa	Known RBP	7.48	□□□□□ -1.21
SNT309	YPR101W	APL5	Q08951	932 aa	Known RBP	7.48	□□□□□ -1.21
SNT309	YPR101W	YPL216W	Q08964	1102 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	SMC6	Q12749	1114 aa		7.48	□□□□□ -1.21
SNT309	YPR101W	ARG82	P07250	355 aa		7.47	□□□□□ -1.21
SNT309	YPR101W	YEL076C-A	P0CX16	216 aa		7.47	□□□□□ -1.21
SNT309	YPR101W	YLR464W	P0CX17	216 aa		7.47	□□□□□ -1.21
SNT309	YPR101W	SEC8	P32855	1065 aa		7.47	□□□□□ -1.21
SNT309	YPR101W	UBC6	P33296	250 aa	Predicted RBP	7.47	□□□□□ -1.21
SNT309	YPR101W	YSW1	P38280	609 aa		7.47	□□□□□ -1.21
SNT309	YPR101W	SET5	P38890	526 aa	Known RBP	7.47	□□□□□ -1.21
SNT309	YPR101W	YEL076C	P39971	216 aa		7.47	□□□□□ -1.21
SNT309	YPR101W	PUS6	P53294	404 aa		7.47	□□□□□ -1.21
SNT309	YPR101W	URH1	Q04179	340 aa		7.47	□□□□□ -1.21
SNT309	YPR101W	VIP1	Q06685	1146 aa	Known RBP	7.47	□□□□□ -1.21
SNT309	YPR101W	MLH2	Q07980	695 aa		7.47	□□□□□ -1.21
SNT309	YPR101W	TCO89	Q08921	799 aa		7.47	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms