RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABP140	YOR239W	CAF130	P53280	1122 aa	Predicted RBP	4.06	□□□□□ -1.76
ABP140	YOR239W	BRE1	Q07457	700 aa	Known RBP	4.06	□□□□□ -1.76
ABP140	YOR239W	GNT1	Q12096	491 aa		4.06	□□□□□ -1.76
ABP140	YOR239W	OCA6	Q12454	224 aa		4.06	□□□□□ -1.76
ABP140	YOR239W	USO1	P25386	1790 aa		4.06	□□□□□ -1.76
ABP140	YOR239W	RPO21	P04050	1733 aa	Known RBP	4.06	□□□□□ -1.76
ABP140	YOR239W	JIP3	O13555	125 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	REP1	P03871	373 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	HIS3	P06633	220 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	RAD1	P06777	1100 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	SEN2	P16658	377 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	RAM1	P22007	431 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	LOS1	P33418	1100 aa	Predicted RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	CIC1	P38779	376 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	RSC30	P38781	883 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	REV7	P38927	245 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	BUD16	P39988	312 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	SCS2	P40075	244 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	GCD14	P46959	383 aa	Predicted RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	ENP2	P48234	707 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	PCL10	P53124	433 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	SFB2	P53953	876 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	REX2	P54964	269 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	ADA2	Q02336	434 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	MSH5	Q12175	901 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	RKM4	Q12504	494 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	SSK22	P25390	1331 aa	Predicted RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	RPO41	P13433	1351 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	GPA1	P08539	472 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	STE6	P12866	1290 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	RSR1	P13856	272 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	NIP100	P33420	868 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	NPL4	P33755	580 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	KES1	P35844	434 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	KAP123	P40069	1113 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	TEL2	P53038	688 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	UTP22	P53254	1237 aa	Predicted RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	YGR266W	P53326	701 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	SQS1	P53866	767 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	ALF1	P53904	254 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	COG6	P53959	839 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	CIK1	Q01649	594 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	DML1	Q03652	475 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	RSM24	Q03976	319 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	SXM1	Q04175	944 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	SPC24	Q04477	213 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	MAG2	Q06436	670 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	ISU2	Q12056	156 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	RIO1	Q12196	484 aa	Known RBP	4.05	□□□□□ -1.76
ABP140	YOR239W	SCM3	Q12334	223 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	OSH2	Q12451	1283 aa		4.05	□□□□□ -1.76
ABP140	YOR239W	DNF3	Q12674	1656 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	TOM70	P07213	617 aa	Known RBP	4.04	□□□□□ -1.76
ABP140	YOR239W	VPS1	P21576	704 aa	Known RBP	4.04	□□□□□ -1.76
ABP140	YOR239W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
ABP140	YOR239W	YJU3	P28321	313 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	SEC21	P32074	935 aa	Known RBP	4.04	□□□□□ -1.76
ABP140	YOR239W	SMY2	P32909	740 aa	Known RBP	4.04	□□□□□ -1.76
ABP140	YOR239W	ARC19	P33204	171 aa	Known RBP	4.04	□□□□□ -1.76
ABP140	YOR239W	STO1	P34160	861 aa	Known RBP	4.04	□□□□□ -1.76
ABP140	YOR239W	OCT1	P35999	772 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	FZO1	P38297	855 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	SIP3	P38717	1229 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
ABP140	YOR239W	MAM1	P40065	302 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	ATG3	P40344	310 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	FYV10	P40492	516 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	AXL1	P40851	1208 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	VTC2	P43585	828 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	POL31	P46957	487 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	ATG36	P46983	293 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	JJJ2	P46997	583 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	ERP6	P53198	216 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	RTS3	P53289	263 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	VPS75	P53853	264 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	BOP3	P53958	396 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	GTR1	Q00582	310 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	RAT1	Q02792	1006 aa	Known RBP	4.04	□□□□□ -1.76
ABP140	YOR239W	YPL109C	Q02981	657 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	SPO71	Q03868	1245 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	PPM1	Q04081	328 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	TRS120	Q04183	1289 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	ERF2	Q06551	359 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	ARR2	Q06597	130 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	NOP6	Q07623	225 aa	Known RBP	4.04	□□□□□ -1.76
ABP140	YOR239W	RTT109	Q07794	436 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	TMA16	Q08687	178 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	NUR1	Q12066	484 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	YRR1	Q12172	810 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	HSP42	Q12329	375 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	VTH1	P40438	1549 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	VTH2	P40890	1549 aa		4.04	□□□□□ -1.76
ABP140	YOR239W	CDC16	P09798	840 aa		4.03	□□□□□ -1.76
ABP140	YOR239W	ESS1	P22696	170 aa		4.03	□□□□□ -1.76
ABP140	YOR239W	VAN1	P23642	535 aa		4.03	□□□□□ -1.76
ABP140	YOR239W	GSY2	P27472	705 aa		4.03	□□□□□ -1.76
ABP140	YOR239W	CDC15	P27636	974 aa		4.03	□□□□□ -1.76
ABP140	YOR239W	VPH2	P32341	215 aa		4.03	□□□□□ -1.76
ABP140	YOR239W	STE5	P32917	917 aa		4.03	□□□□□ -1.76
ABP140	YOR239W	YKL091C	P33324	310 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 74 ms