RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRI2	YOL117W	RRT14	P40470	206 aa		4.14	□□□□□ -1.75
RRI2	YOL117W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
RRI2	YOL117W	ENV11	P53246	860 aa		4.14	□□□□□ -1.75
RRI2	YOL117W	SVS1	Q12254	260 aa		4.14	□□□□□ -1.75
RRI2	YOL117W	FMP25	Q08023	583 aa		4.13	□□□□□ -1.75
RRI2	YOL117W	YLL058W	Q12198	575 aa		4.13	□□□□□ -1.75
RRI2	YOL117W	THS1	P04801	734 aa	Known RBP	4.13	□□□□□ -1.75
RRI2	YOL117W	CDC12	P32468	407 aa	Known RBP	4.13	□□□□□ -1.75
RRI2	YOL117W	ELM1	P32801	640 aa		4.13	□□□□□ -1.75
RRI2	YOL117W	RFC5	P38251	354 aa		4.13	□□□□□ -1.75
RRI2	YOL117W	ETP1	P38748	585 aa	Known RBP	4.13	□□□□□ -1.75
RRI2	YOL117W	YJL049W	P47048	450 aa		4.13	□□□□□ -1.75
RRI2	YOL117W	SIZ1	Q04195	904 aa		4.13	□□□□□ -1.75
RRI2	YOL117W	CDA2	Q06703	312 aa		4.13	□□□□□ -1.75
RRI2	YOL117W	HBS1	P32769	611 aa	Known RBP	4.12	□□□□□ -1.75
RRI2	YOL117W	NPP2	P39997	493 aa		4.12	□□□□□ -1.75
RRI2	YOL117W	NNF1	P47149	201 aa		4.12	□□□□□ -1.75
RRI2	YOL117W	HFM1	P51979	1187 aa		4.12	□□□□□ -1.75
RRI2	YOL117W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
RRI2	YOL117W	MDM38	Q08179	573 aa		4.12	□□□□□ -1.75
RRI2	YOL117W	RPL8B	P29453	256 aa	Known RBP	4.11	□□□□□ -1.75
RRI2	YOL117W	AFR1	P33304	620 aa		4.11	□□□□□ -1.75
RRI2	YOL117W	YHR020W	P38708	688 aa	Known RBP	4.11	□□□□□ -1.75
RRI2	YOL117W	IOC3	P43596	787 aa		4.11	□□□□□ -1.75
RRI2	YOL117W	UTP8	P53276	713 aa	Known RBP	4.11	□□□□□ -1.75
RRI2	YOL117W	MRPL22	P53881	309 aa		4.11	□□□□□ -1.75
RRI2	YOL117W	NAN1	Q02931	896 aa	Known RBP	4.11	□□□□□ -1.75
RRI2	YOL117W	MSC2	Q03455	724 aa		4.11	□□□□□ -1.75
RRI2	YOL117W	GIC1	P38785	314 aa		4.11	□□□□□ -1.75
RRI2	YOL117W	SIT1	P39980	628 aa		4.11	□□□□□ -1.75
RRI2	YOL117W	AVT1	P47082	602 aa		4.11	□□□□□ -1.75
RRI2	YOL117W	FOL2	P51601	243 aa	Known RBP	4.11	□□□□□ -1.75
RRI2	YOL117W	PLB2	Q03674	706 aa		4.11	□□□□□ -1.75
RRI2	YOL117W	XYL2	Q07993	356 aa		4.11	□□□□□ -1.75
RRI2	YOL117W	CYC1	P00044	109 aa	Predicted RBP	4.1	□□□□□ -1.75
RRI2	YOL117W	RAD4	P14736	754 aa		4.1	□□□□□ -1.75
RRI2	YOL117W	NIT1	P40447	199 aa		4.1	□□□□□ -1.75
RRI2	YOL117W	SRT1	Q03175	343 aa		4.1	□□□□□ -1.75
RRI2	YOL117W	BUL2	Q03758	920 aa	Known RBP	4.1	□□□□□ -1.75
RRI2	YOL117W	RNQ1	P25367	405 aa		4.09	□□□□□ -1.75
RRI2	YOL117W	THI80	P35202	319 aa		4.09	□□□□□ -1.75
RRI2	YOL117W	YDR132C	Q03900	495 aa		4.09	□□□□□ -1.75
RRI2	YOL117W	RSM24	Q03976	319 aa		4.09	□□□□□ -1.75
RRI2	YOL117W	DUS3	Q06053	668 aa	Known RBP	4.09	□□□□□ -1.75
RRI2	YOL117W	BDF2	Q07442	638 aa		4.09	□□□□□ -1.75
RRI2	YOL117W	NPP1	P25353	742 aa		4.09	□□□□□ -1.76
RRI2	YOL117W	APL1	P27351	700 aa		4.09	□□□□□ -1.76
RRI2	YOL117W	YAP1801	P38856	637 aa		4.09	□□□□□ -1.76
RRI2	YOL117W	YKE2	P52553	114 aa		4.09	□□□□□ -1.76
RRI2	YOL117W	SNO2	P53823	222 aa		4.09	□□□□□ -1.76
RRI2	YOL117W	SRP1	Q02821	542 aa	Known RBP	4.09	□□□□□ -1.76
RRI2	YOL117W	NSE3	Q05541	303 aa		4.09	□□□□□ -1.76
RRI2	YOL117W	DUS4	Q06063	367 aa		4.09	□□□□□ -1.76
RRI2	YOL117W	CDC6	P09119	513 aa		4.08	□□□□□ -1.76
RRI2	YOL117W	GAS1	P22146	559 aa	Known RBP	4.08	□□□□□ -1.76
RRI2	YOL117W	FUN30	P31380	1131 aa		4.08	□□□□□ -1.76
RRI2	YOL117W	LAM1	P38851	1228 aa		4.08	□□□□□ -1.76
RRI2	YOL117W	MEF2	P39677	819 aa		4.08	□□□□□ -1.76
RRI2	YOL117W	SAH1	P39954	449 aa	Known RBP	4.08	□□□□□ -1.76
RRI2	YOL117W	GYP7	P48365	746 aa		4.08	□□□□□ -1.76
RRI2	YOL117W	HUL5	P53119	910 aa		4.08	□□□□□ -1.76
RRI2	YOL117W	SGD1	Q06132	899 aa		4.08	□□□□□ -1.76
RRI2	YOL117W	YDR306C	Q06640	478 aa		4.08	□□□□□ -1.76
RRI2	YOL117W	SPO75	Q07798	868 aa		4.08	□□□□□ -1.76
RRI2	YOL117W	YOL098C	Q12496	1037 aa		4.08	□□□□□ -1.76
RRI2	YOL117W	GAL10	P04397	699 aa		4.07	□□□□□ -1.76
RRI2	YOL117W	KIN2	P13186	1147 aa	Known RBP	4.07	□□□□□ -1.76
RRI2	YOL117W	PRP6	P19735	899 aa	Predicted RBP	4.07	□□□□□ -1.76
RRI2	YOL117W	TSL1	P38427	1098 aa	Known RBP	4.07	□□□□□ -1.76
RRI2	YOL117W	CMP2	P14747	604 aa		4.07	□□□□□ -1.76
RRI2	YOL117W	PRP9	P19736	530 aa	Known RBP	4.07	□□□□□ -1.76
RRI2	YOL117W	YKR078W	P36158	585 aa	Known RBP	4.07	□□□□□ -1.76
RRI2	YOL117W	ECM21	P38167	1117 aa	Known RBP	4.07	□□□□□ -1.76
RRI2	YOL117W	YBR238C	P38330	731 aa	Known RBP	4.07	□□□□□ -1.76
RRI2	YOL117W	EAF1	Q06337	982 aa		4.07	□□□□□ -1.76
RRI2	YOL117W	PPM2	Q08282	695 aa		4.07	□□□□□ -1.76
RRI2	YOL117W	FLC1	Q08967	793 aa		4.07	□□□□□ -1.76
RRI2	YOL117W	SOD2	P00447	233 aa		4.06	□□□□□ -1.76
RRI2	YOL117W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RRI2	YOL117W	ALR2	P43553	858 aa		4.06	□□□□□ -1.76
RRI2	YOL117W	TIM54	P47045	478 aa		4.06	□□□□□ -1.76
RRI2	YOL117W	ERP6	P53198	216 aa		4.06	□□□□□ -1.76
RRI2	YOL117W	SFB2	P53953	876 aa		4.06	□□□□□ -1.76
RRI2	YOL117W	TAF8	Q03750	510 aa		4.06	□□□□□ -1.76
RRI2	YOL117W	UBX5	Q06682	500 aa		4.06	□□□□□ -1.76
RRI2	YOL117W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RRI2	YOL117W	YPL277C	Q08989	487 aa		4.06	□□□□□ -1.76
RRI2	YOL117W	OSW2	Q12202	724 aa		4.06	□□□□□ -1.76
RRI2	YOL117W	HBN1	Q96VH4	193 aa		4.06	□□□□□ -1.76
RRI2	YOL117W	CIT1	P00890	479 aa		4.05	□□□□□ -1.76
RRI2	YOL117W	AIM3	P38266	947 aa	Known RBP	4.05	□□□□□ -1.76
RRI2	YOL117W	GCN5	Q03330	439 aa		4.05	□□□□□ -1.76
RRI2	YOL117W	ADE8	P04161	214 aa		4.05	□□□□□ -1.76
RRI2	YOL117W	RPS13	P05756	151 aa	Known RBP	4.05	□□□□□ -1.76
RRI2	YOL117W	HSP60	P19882	572 aa	Known RBP	4.05	□□□□□ -1.76
RRI2	YOL117W	AAR2	P32357	355 aa	Predicted RBP	4.05	□□□□□ -1.76
RRI2	YOL117W	ERT1	P38140	529 aa		4.05	□□□□□ -1.76
RRI2	YOL117W	RSP5	P39940	809 aa	Known RBP	4.05	□□□□□ -1.76
RRI2	YOL117W	BUD6	P41697	788 aa		4.05	□□□□□ -1.76
RRI2	YOL117W	PRP43	P53131	767 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms