RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	VTH1	P40438	1549 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	VTH2	P40890	1549 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	TOM70	P07213	617 aa	Known RBP	4.11	□□□□□ -1.75
LDS2	YOL047C	DAL5	P15365	543 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	AGP1	P25376	633 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	VBA3	P25594	458 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	TPD3	P31383	635 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	DAL3	P32459	195 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	MRP8	P35719	219 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	KTR4	P38131	464 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	LDH1	P38139	375 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	RKM3	P38222	552 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	AMN1	P38285	549 aa	Predicted RBP	4.11	□□□□□ -1.75
LDS2	YOL047C	MED8	P38304	223 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	BSD2	P38356	321 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	GEM1	P39722	662 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	RRT14	P40470	206 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	QDR2	P40474	542 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	EMW1	P42842	904 aa	Known RBP	4.11	□□□□□ -1.75
LDS2	YOL047C	STU2	P46675	888 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	BNA1	P47096	177 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	RSM26	P47141	266 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	RSC1	P53236	928 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	KRE33	P53914	1056 aa	Known RBP	4.11	□□□□□ -1.75
LDS2	YOL047C	ISU1	Q03020	165 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	UGO1	Q03327	502 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	GIC2	Q06648	383 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	YLR001C	Q07895	862 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	TRE2	Q08693	809 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	BMS1	Q08965	1183 aa	Known RBP	4.11	□□□□□ -1.75
LDS2	YOL047C	WTM2	Q12206	467 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	TY1A-BL	Q12266	440 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	Q0182	Q9ZZW1	134 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	RTC1	Q08281	1341 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	YRF1-4	O13559	1382 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	YML133C	Q03099	1374 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	YLL067C	Q07888	1374 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	YLL066C	Q99208	1374 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	MET5	P47169	1442 aa		4.11	□□□□□ -1.75
LDS2	YOL047C	KAR2	P16474	682 aa	Known RBP	4.1	□□□□□ -1.75
LDS2	YOL047C	SSH4	P32343	579 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
LDS2	YOL047C	RER2	P35196	286 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	IRS4	P36115	615 aa	Known RBP	4.1	□□□□□ -1.75
LDS2	YOL047C	TBS1	P38114	1094 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	PAN5	P38787	379 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	CCC2	P38995	1004 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	DSN1	P40568	576 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	CEP3	P40969	608 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	GNP1	P48813	663 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	PEX13	P80667	386 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	HDA2	Q06629	674 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	YOL087C	Q99247	1116 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	RAV1	P47104	1357 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	DNF2	Q12675	1612 aa		4.1	□□□□□ -1.75
LDS2	YOL047C	TY2B-B	Q12491	1770 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	DED1	P06634	604 aa	Known RBP	4.09	□□□□□ -1.75
LDS2	YOL047C	RAD18	P10862	487 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	INO1	P11986	533 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	DEP1	P31385	405 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	MLF3	P32047	452 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	HSP78	P33416	811 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	SQT1	P35184	431 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	BDH2	P39713	417 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	ECM1	P39715	212 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	FIR1	P40020	876 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	NTA1	P40354	457 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	YIL092W	P40497	633 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	UTP8	P53276	713 aa	Known RBP	4.09	□□□□□ -1.75
LDS2	YOL047C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
LDS2	YOL047C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
LDS2	YOL047C	RNT1	Q02555	471 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	YML131W	Q03102	365 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	MTQ2	Q03920	221 aa	Predicted RBP	4.09	□□□□□ -1.75
LDS2	YOL047C	SHE9	Q04172	456 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	YPQ2	Q06328	317 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	PSK2	Q08217	1101 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	TMA46	Q12000	345 aa	Known RBP	4.09	□□□□□ -1.75
LDS2	YOL047C	HBN1	Q96VH4	193 aa		4.09	□□□□□ -1.75
LDS2	YOL047C	ROM2	P51862	1356 aa	Known RBP	4.09	□□□□□ -1.75
LDS2	YOL047C	LTE1	P07866	1435 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	HAP1	P0CE41	1502 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	HEM13	P11353	328 aa	Known RBP	4.08	□□□□□ -1.76
LDS2	YOL047C	SBA1	P28707	216 aa	Known RBP	4.08	□□□□□ -1.76
LDS2	YOL047C	DBF20	P32328	564 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	LYP1	P32487	611 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	MKS1	P34072	584 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	TFC3	P34111	1160 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	SCD5	P34758	872 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	ESL2	P36168	1195 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	PBY1	P38254	753 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	APM2	P38700	605 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	PEX28	P38848	579 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	MNT3	P40549	630 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	CIR1	P42940	261 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	NUT1	P53114	1132 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	ROD1	Q02805	837 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	PRP3	Q03338	469 aa	Predicted RBP	4.08	□□□□□ -1.76
LDS2	YOL047C	PHM7	Q12252	991 aa		4.08	□□□□□ -1.76
LDS2	YOL047C	RRI2	Q12348	645 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms