RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	SAP30	P38429	201 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	POL31	P46957	487 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	INP52	P50942	1183 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	YAT1	P80235	687 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	TIM11	P81449	96 aa	Predicted RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	ESF1	Q06344	628 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	AVO1	Q08236	1176 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	YLL058W	Q12198	575 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	MEX67	Q99257	599 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	SES1	P07284	462 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	VAS1	P07806	1104 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	HCA4	P20448	770 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	STB5	P38699	743 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	MMF1	P40185	145 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	MID1	P41821	548 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	LIF1	P53150	421 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	ASI3	P53983	676 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	ACK1	Q07622	623 aa	Predicted RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	YOL057W	Q08225	711 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	RPN8	Q08723	338 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	YOR111W	Q99210	232 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	ACE2	P21192	770 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	OPI1	P21957	404 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	POT1	P27796	417 aa	Known RBP RIP-Chip data	1.68	□□□□□ -2.14	not detected
SSK2	YNR031C	BCS1	P32839	456 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	POL12	P38121	705 aa	Predicted RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	PPX1	P38698	397 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	UBP5	P39944	805 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	RTR1	P40084	226 aa	Predicted RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	PUS2	P53167	370 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	MEH1	Q02205	184 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	KAR5	Q04746	504 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	RRP9	Q06506	573 aa	Known RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	TLG2	Q08144	397 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	YPR204W	Q08995	1032 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	DBP10	Q12389	995 aa	Known RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	RAM2	P29703	316 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	YEL023C	P39992	682 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	UTP18	P40362	594 aa	Predicted RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	TY4A-J	P47023	414 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	RNR4	P49723	345 aa	Known RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	RKM2	Q03942	479 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	HEL2	Q05580	639 aa	Known RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	MPC54	Q08550	464 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	YOR389W	Q08912	624 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	YPL278C	Q08990	100 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	DPH6	Q12429	685 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	PEP12	P32854	288 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	DCW1	P36091	449 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	AKL1	P38080	1108 aa	Known RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	GLO3	P38682	493 aa	Known RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	CRP1	P38845	465 aa	Known RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	YDR341C	Q05506	607 aa	Known RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	NSE1	Q07913	336 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	POL30	P15873	258 aa	Known RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	DPB3	P27344	201 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	YEL1	P34225	687 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	ATG19	P35193	415 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	MOB1	P40484	314 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	SDS3	P40505	327 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	ALT2	P52892	507 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	MDM1	Q01846	1127 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	FUS2	Q05670	677 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	SKG3	Q06315	1026 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	TDA5	Q06417	326 aa	Known RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	RSC2	Q06488	889 aa		1.68	□□□□□ -2.14
SSK2	YNR031C	SSF2	Q12153	453 aa	Predicted RBP	1.68	□□□□□ -2.14
SSK2	YNR031C	DPS1	P04802	557 aa	Known RBP	1.67	□□□□□ -2.14
SSK2	YNR031C	GRX7	P38068	203 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	ILV3	P39522	585 aa	Known RBP	1.67	□□□□□ -2.14
SSK2	YNR031C	SIT1	P39980	628 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	RPT2	P40327	437 aa	Known RBP	1.67	□□□□□ -2.14
SSK2	YNR031C	BDP1	P46678	594 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	RSM26	P47141	266 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	CTR9	P89105	1077 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	RTP1	Q12751	981 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	AI4	P03878	556 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	STE11	P23561	717 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	PER1	P25625	357 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	RME1	P32338	300 aa	Known RBP	1.67	□□□□□ -2.14
SSK2	YNR031C	GCD6	P32501	712 aa	Known RBP	1.67	□□□□□ -2.14
SSK2	YNR031C	FLO10	P36170	1169 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	VPS8	P39702	1274 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	MSH4	P40965	878 aa	Predicted RBP	1.67	□□□□□ -2.14
SSK2	YNR031C	ROG3	P43602	733 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	YGR035C	P53222	116 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	EMI2	Q04409	500 aa	Known RBP	1.67	□□□□□ -2.14
SSK2	YNR031C	YPL150W	Q12152	901 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	RRI2	Q12348	645 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	CLC1	P17891	233 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	PRD1	P25375	712 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	CYM1	P32898	989 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	VPS35	P34110	944 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	BOI2	P39969	1040 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	IGO1	P53897	168 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	CSC1	Q06538	782 aa		1.67	□□□□□ -2.14
SSK2	YNR031C	SEC6	P32844	805 aa		1.66	□□□□□ -2.14
SSK2	YNR031C	DID4	P36108	232 aa		1.66	□□□□□ -2.14
SSK2	YNR031C	UBP13	P38187	747 aa		1.66	□□□□□ -2.14
SSK2	YNR031C	SRC1	Q03707	834 aa		1.66	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms