RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C MCM3P24279 971 aaKnown RBP5.42□□□□□ -1.54
NUP116YMR047C POT1P27796 417 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
NUP116YMR047C SYN8P31377 255 aa5.42□□□□□ -1.54
NUP116YMR047C SPO74P45819 413 aa5.42□□□□□ -1.54
NUP116YMR047C YJL045WP47052 634 aa5.42□□□□□ -1.54
NUP116YMR047C MSC2Q03455 724 aa5.42□□□□□ -1.54
NUP116YMR047C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
NUP116YMR047C UBC1P21734 215 aaKnown RBP5.41□□□□□ -1.54
NUP116YMR047C YLR257WQ06146 321 aaKnown RBP5.41□□□□□ -1.54
NUP116YMR047C SPT5P27692 1063 aaKnown RBP5.41□□□□□ -1.54
NUP116YMR047C HXT5P38695 592 aa5.41□□□□□ -1.54
NUP116YMR047C ALD5P40047 520 aaKnown RBP5.41□□□□□ -1.54
NUP116YMR047C BNI4P53858 892 aa5.41□□□□□ -1.54
NUP116YMR047C FAP1P53971 965 aa5.41□□□□□ -1.54
NUP116YMR047C YDR341CQ05506 607 aaKnown RBP5.41□□□□□ -1.54
NUP116YMR047C MMR1Q06324 491 aa5.41□□□□□ -1.54
NUP116YMR047C GGA1Q06336 557 aa5.41□□□□□ -1.54
NUP116YMR047C SWI6P09959 803 aa5.41□□□□□ -1.54
NUP116YMR047C PDR1P12383 1068 aa5.41□□□□□ -1.54
NUP116YMR047C SEC23P15303 768 aaKnown RBP5.41□□□□□ -1.54
NUP116YMR047C MRF1P30775 413 aaPredicted RBP5.41□□□□□ -1.54
NUP116YMR047C EFT1P32324 842 aaKnown RBP5.41□□□□□ -1.54
NUP116YMR047C PSE1P32337 1089 aaKnown RBP5.41□□□□□ -1.54
NUP116YMR047C PGM1P33401 570 aaKnown RBP5.41□□□□□ -1.54
NUP116YMR047C HUL5P53119 910 aa5.41□□□□□ -1.54
NUP116YMR047C RRP15Q06511 250 aaPredicted RBP5.41□□□□□ -1.54
NUP116YMR047C SMY2P32909 740 aaKnown RBP5.4□□□□□ -1.54
NUP116YMR047C YIR014WP40570 242 aa5.4□□□□□ -1.54
NUP116YMR047C GPD2P41911 440 aaKnown RBP5.4□□□□□ -1.54
NUP116YMR047C ISM1P48526 1002 aa5.4□□□□□ -1.54
NUP116YMR047C MCM6P53091 1017 aaKnown RBP5.4□□□□□ -1.54
NUP116YMR047C ZPR1P53303 486 aaKnown RBP5.4□□□□□ -1.54
NUP116YMR047C RPL17AP05740 184 aaKnown RBP5.4□□□□□ -1.55
NUP116YMR047C CKA2P19454 339 aa5.4□□□□□ -1.55
NUP116YMR047C CLB1P24868 471 aa5.4□□□□□ -1.55
NUP116YMR047C YOR111WQ99210 232 aa5.4□□□□□ -1.55
NUP116YMR047C RPS9AO13516 197 aaKnown RBP5.4□□□□□ -1.55
NUP116YMR047C CIT1P00890 479 aa5.4□□□□□ -1.55
NUP116YMR047C TCP1P12612 559 aaKnown RBP5.4□□□□□ -1.55
NUP116YMR047C SUV3P32580 737 aa5.4□□□□□ -1.55
NUP116YMR047C NMD3P38861 518 aaKnown RBP5.4□□□□□ -1.55
NUP116YMR047C JHD1P40034 492 aa5.4□□□□□ -1.55
NUP116YMR047C ORC4P54791 529 aa5.4□□□□□ -1.55
NUP116YMR047C TIM11P81449 96 aaPredicted RBP5.4□□□□□ -1.55
NUP116YMR047C PRP22P24384 1145 aaKnown RBP5.39□□□□□ -1.55
NUP116YMR047C DPH2P32461 534 aa5.39□□□□□ -1.55
NUP116YMR047C SAS3P34218 831 aa5.39□□□□□ -1.55
NUP116YMR047C BUD16P39988 312 aa5.39□□□□□ -1.55
NUP116YMR047C MSH6Q03834 1242 aa5.39□□□□□ -1.55
NUP116YMR047C YLR422WQ06409 1932 aa5.39□□□□□ -1.55
NUP116YMR047C MET6P05694 767 aaKnown RBP5.39□□□□□ -1.55
NUP116YMR047C SES1P07284 462 aaKnown RBP5.39□□□□□ -1.55
NUP116YMR047C TRL1P09880 827 aaKnown RBP5.39□□□□□ -1.55
NUP116YMR047C MSS51P32335 436 aa5.39□□□□□ -1.55
NUP116YMR047C TFG1P41895 735 aaPredicted RBP5.39□□□□□ -1.55
NUP116YMR047C AZR1P50080 613 aa5.39□□□□□ -1.55
NUP116YMR047C YKE2P52553 114 aa5.39□□□□□ -1.55
NUP116YMR047C TIP41Q12199 356 aa5.39□□□□□ -1.55
NUP116YMR047C MAM3Q12296 706 aa5.39□□□□□ -1.55
NUP116YMR047C CIC1P38779 376 aaKnown RBP5.38□□□□□ -1.55
NUP116YMR047C THI6P41835 540 aa5.38□□□□□ -1.55
NUP116YMR047C ASE1P50275 885 aa5.38□□□□□ -1.55
NUP116YMR047C HDA1P53973 706 aa5.38□□□□□ -1.55
NUP116YMR047C YPL150WQ12152 901 aa5.38□□□□□ -1.55
NUP116YMR047C TY4B-PA0A0B7P3V8 1104 aa5.38□□□□□ -1.55
NUP116YMR047C RPL5P26321 297 aaKnown RBP5.38□□□□□ -1.55
NUP116YMR047C UBP11P36026 717 aa5.38□□□□□ -1.55
NUP116YMR047C FIS1P40515 155 aa5.38□□□□□ -1.55
NUP116YMR047C ROD1Q02805 837 aa5.38□□□□□ -1.55
NUP116YMR047C AHC1Q12433 566 aa5.38□□□□□ -1.55
NUP116YMR047C ARP6Q12509 438 aa5.38□□□□□ -1.55
NUP116YMR047C RNR2P09938 399 aaKnown RBP5.38□□□□□ -1.55
NUP116YMR047C ADE2P21264 571 aaKnown RBP5.38□□□□□ -1.55
NUP116YMR047C SWI4P25302 1093 aaKnown RBP5.38□□□□□ -1.55
NUP116YMR047C SHP1P34223 423 aa5.38□□□□□ -1.55
NUP116YMR047C SLX1P38324 304 aa5.38□□□□□ -1.55
NUP116YMR047C BEM4P39011 633 aa5.38□□□□□ -1.55
NUP116YMR047C NUP82P40368 713 aa5.38□□□□□ -1.55
NUP116YMR047C PCI8P40512 444 aa5.38□□□□□ -1.55
NUP116YMR047C YMR1P47147 688 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
NUP116YMR047C SCS3P53012 380 aa5.38□□□□□ -1.55
NUP116YMR047C YGL039WP53183 348 aaKnown RBP5.38□□□□□ -1.55
NUP116YMR047C RMD1Q03441 430 aa5.38□□□□□ -1.55
NUP116YMR047C RPL22AP05749 121 aaKnown RBP5.37□□□□□ -1.55
NUP116YMR047C CMP2P14747 604 aa5.37□□□□□ -1.55
NUP116YMR047C HSC82P15108 705 aaKnown RBP5.37□□□□□ -1.55
NUP116YMR047C MSD1P15179 658 aaKnown RBP5.37□□□□□ -1.55
NUP116YMR047C ALG1P16661 449 aa5.37□□□□□ -1.55
NUP116YMR047C NUF2P33895 451 aa5.37□□□□□ -1.55
NUP116YMR047C SUL1P38359 859 aa5.37□□□□□ -1.55
NUP116YMR047C GAA1P39012 614 aa5.37□□□□□ -1.55
NUP116YMR047C MMF1P40185 145 aaKnown RBP5.37□□□□□ -1.55
NUP116YMR047C RRB1Q04225 511 aaKnown RBP5.37□□□□□ -1.55
NUP116YMR047C TFB4Q12004 338 aa5.37□□□□□ -1.55
NUP116YMR047C YLL058WQ12198 575 aa5.37□□□□□ -1.55
NUP116YMR047C MAS2P11914 482 aa5.37□□□□□ -1.55
NUP116YMR047C CLN1P20437 546 aa5.37□□□□□ -1.55
NUP116YMR047C MRPL7P36519 292 aa5.37□□□□□ -1.55
NUP116YMR047C FLR1P38124 548 aa5.37□□□□□ -1.55
NUP116YMR047C ECM7Q06200 448 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 333.3 ms