RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W RRT14P40470 206 aa5.71□□□□□ -1.5
SMD2YLR275W RIM8P53179 542 aa5.71□□□□□ -1.5
SMD2YLR275W SGD1Q06132 899 aa5.71□□□□□ -1.5
SMD2YLR275W PRI2P20457 528 aa5.7□□□□□ -1.5
SMD2YLR275W RIB2Q12362 591 aaKnown RBP5.7□□□□□ -1.5
SMD2YLR275W SOD2P00447 233 aa5.69□□□□□ -1.5
SMD2YLR275W RPS13P05756 151 aaKnown RBP5.69□□□□□ -1.5
SMD2YLR275W CMP2P14747 604 aa5.69□□□□□ -1.5
SMD2YLR275W APL1P27351 700 aa5.69□□□□□ -1.5
SMD2YLR275W YKL069WP36088 180 aa5.69□□□□□ -1.5
SMD2YLR275W NOP7P53261 605 aaKnown RBP5.69□□□□□ -1.5
SMD2YLR275W YPL277CQ08989 487 aa5.69□□□□□ -1.5
SMD2YLR275W THI80P35202 319 aa5.68□□□□□ -1.5
SMD2YLR275W LAM1P38851 1228 aa5.68□□□□□ -1.5
SMD2YLR275W SHE9Q04172 456 aa5.68□□□□□ -1.5
SMD2YLR275W SIZ1Q04195 904 aa5.68□□□□□ -1.5
SMD2YLR275W GAL10P04397 699 aa5.67□□□□□ -1.5
SMD2YLR275W SRM1P21827 482 aa5.67□□□□□ -1.5
SMD2YLR275W VBA5P36172 582 aa5.67□□□□□ -1.5
SMD2YLR275W MBP1P39678 833 aa5.67□□□□□ -1.5
SMD2YLR275W HFM1P51979 1187 aa5.67□□□□□ -1.5
SMD2YLR275W ROT1Q03691 256 aa5.67□□□□□ -1.5
SMD2YLR275W MEF2P39677 819 aa5.66□□□□□ -1.5
SMD2YLR275W GCN5Q03330 439 aa5.66□□□□□ -1.5
SMD2YLR275W YDR132CQ03900 495 aa5.66□□□□□ -1.5
SMD2YLR275W HRQ1Q05549 1077 aa5.66□□□□□ -1.5
SMD2YLR275W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
SMD2YLR275W TOD6P34219 525 aa5.65□□□□□ -1.5
SMD2YLR275W YKL151CP36059 337 aa5.65□□□□□ -1.5
SMD2YLR275W MTC3P53077 123 aa5.65□□□□□ -1.5
SMD2YLR275W MSC2Q03455 724 aa5.65□□□□□ -1.5
SMD2YLR275W PLB2Q03674 706 aa5.65□□□□□ -1.5
SMD2YLR275W YLL058WQ12198 575 aa5.65□□□□□ -1.5
SMD2YLR275W MRP8P35719 219 aa5.64□□□□□ -1.51
SMD2YLR275W SPF1P39986 1215 aaKnown RBP5.64□□□□□ -1.51
SMD2YLR275W SPT20P50875 604 aa5.64□□□□□ -1.51
SMD2YLR275W TDA5Q06417 326 aaKnown RBP5.64□□□□□ -1.51
SMD2YLR275W MDM38Q08179 573 aa5.64□□□□□ -1.51
SMD2YLR275W SAH1P39954 449 aaKnown RBP5.63□□□□□ -1.51
SMD2YLR275W PBP1P53297 722 aaKnown RBP5.63□□□□□ -1.51
SMD2YLR275W SRP1Q02821 542 aaKnown RBP5.63□□□□□ -1.51
SMD2YLR275W DUS4Q06063 367 aa5.63□□□□□ -1.51
SMD2YLR275W OSW2Q12202 724 aa5.63□□□□□ -1.51
SMD2YLR275W DUS3Q06053 668 aaKnown RBP5.62□□□□□ -1.51
SMD2YLR275W XYL2Q07993 356 aa5.62□□□□□ -1.51
SMD2YLR275W ESC8Q08119 714 aa5.62□□□□□ -1.51
SMD2YLR275W WRS1Q12109 432 aaKnown RBP5.62□□□□□ -1.51
SMD2YLR275W SSF2Q12153 453 aaPredicted RBP5.62□□□□□ -1.51
SMD2YLR275W CDC12P32468 407 aaKnown RBP5.61□□□□□ -1.51
SMD2YLR275W FLR1P38124 548 aa5.61□□□□□ -1.51
SMD2YLR275W PBY1P38254 753 aa5.61□□□□□ -1.51
SMD2YLR275W IRR1P40541 1150 aa5.61□□□□□ -1.51
SMD2YLR275W GUS1P46655 708 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
SMD2YLR275W SRT1Q03175 343 aa5.61□□□□□ -1.51
SMD2YLR275W PRE10P21242 288 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SMD2YLR275W FUN30P31380 1131 aa5.6□□□□□ -1.51
SMD2YLR275W GIC1P38785 314 aa5.6□□□□□ -1.51
SMD2YLR275W YAP1801P38856 637 aa5.6□□□□□ -1.51
SMD2YLR275W GTF1P53260 183 aaPredicted RBP5.6□□□□□ -1.51
SMD2YLR275W RXT3Q07458 294 aa5.6□□□□□ -1.51
SMD2YLR275W GPB1Q08886 897 aa5.6□□□□□ -1.51
SMD2YLR275W YLR358CO13565 187 aa5.59□□□□□ -1.51
SMD2YLR275W STE5P32917 917 aa5.59□□□□□ -1.51
SMD2YLR275W DOM34P33309 386 aa5.59□□□□□ -1.51
SMD2YLR275W ZRG8P40021 1076 aa5.59□□□□□ -1.51
SMD2YLR275W MND2P40577 368 aa5.59□□□□□ -1.51
SMD2YLR275W YDR306CQ06640 478 aa5.59□□□□□ -1.51
SMD2YLR275W CDC6P09119 513 aa5.58□□□□□ -1.52
SMD2YLR275W ENA1P13587 1091 aa5.58□□□□□ -1.52
SMD2YLR275W GRX1P25373 110 aaKnown RBP5.58□□□□□ -1.52
SMD2YLR275W YCR015CP25616 317 aa5.58□□□□□ -1.52
SMD2YLR275W YBR184WP38299 523 aa5.58□□□□□ -1.52
SMD2YLR275W TAF1P46677 1066 aa5.58□□□□□ -1.52
SMD2YLR275W ENA2Q01896 1091 aa5.58□□□□□ -1.52
SMD2YLR275W ACK1Q07622 623 aaPredicted RBP5.58□□□□□ -1.52
SMD2YLR275W ENA5Q12691 1091 aa5.58□□□□□ -1.52
SMD2YLR275W PRP9P19736 530 aaKnown RBP5.57□□□□□ -1.52
SMD2YLR275W CDC20P26309 610 aa5.57□□□□□ -1.52
SMD2YLR275W PPH3P32345 308 aa5.57□□□□□ -1.52
SMD2YLR275W YKL222CP35995 705 aa5.57□□□□□ -1.52
SMD2YLR275W ECM21P38167 1117 aaKnown RBP5.57□□□□□ -1.52
SMD2YLR275W GCV2P49095 1034 aa5.57□□□□□ -1.52
SMD2YLR275W TPO2P53283 614 aa5.57□□□□□ -1.52
SMD2YLR275W VPS62P53285 467 aa5.57□□□□□ -1.52
SMD2YLR275W CLU1Q03690 1277 aaKnown RBP5.57□□□□□ -1.52
SMD2YLR275W AAR2P32357 355 aaPredicted RBP5.56□□□□□ -1.52
SMD2YLR275W POA1P38218 177 aa5.56□□□□□ -1.52
SMD2YLR275W GIP4P39732 760 aa5.56□□□□□ -1.52
SMD2YLR275W NPP2P39997 493 aa5.56□□□□□ -1.52
SMD2YLR275W NAN1Q02931 896 aaKnown RBP5.56□□□□□ -1.52
SMD2YLR275W TPO1Q07824 586 aa5.56□□□□□ -1.52
SMD2YLR275W HMI1Q12039 706 aa5.56□□□□□ -1.52
SMD2YLR275W EMC1P25574 760 aa5.55□□□□□ -1.52
SMD2YLR275W SRP101P32916 621 aa5.55□□□□□ -1.52
SMD2YLR275W TAT2P38967 592 aa5.55□□□□□ -1.52
SMD2YLR275W PFD1P46988 109 aa5.55□□□□□ -1.52
SMD2YLR275W GYP7P48365 746 aa5.55□□□□□ -1.52
SMD2YLR275W YGR012WP53206 393 aa5.55□□□□□ -1.52
SMD2YLR275W SFB2P53953 876 aa5.55□□□□□ -1.52
SMD2YLR275W YAP6Q03935 383 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms