RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C SRM1P21827 482 aa5.85□□□□□ -1.47
SMD3YLR147C STE5P32917 917 aa5.85□□□□□ -1.47
SMD3YLR147C SNF7P39929 240 aaKnown RBP5.85□□□□□ -1.47
SMD3YLR147C IRC24P40580 263 aa5.85□□□□□ -1.47
SMD3YLR147C SNO2P53823 222 aa5.85□□□□□ -1.47
SMD3YLR147C TDA5Q06417 326 aaKnown RBP5.85□□□□□ -1.47
SMD3YLR147C CYC1P00044 109 aaPredicted RBP5.84□□□□□ -1.47
SMD3YLR147C THS1P04801 734 aaKnown RBP5.84□□□□□ -1.47
SMD3YLR147C TAT2P38967 592 aa5.84□□□□□ -1.47
SMD3YLR147C RRT14P40470 206 aa5.84□□□□□ -1.47
SMD3YLR147C HFM1P51979 1187 aa5.84□□□□□ -1.47
SMD3YLR147C RSM24Q03976 319 aa5.84□□□□□ -1.47
SMD3YLR147C APL1P27351 700 aa5.83□□□□□ -1.48
SMD3YLR147C MRP8P35719 219 aa5.83□□□□□ -1.48
SMD3YLR147C PRP43P53131 767 aaKnown RBP5.83□□□□□ -1.48
SMD3YLR147C PLB2Q03674 706 aa5.83□□□□□ -1.48
SMD3YLR147C WRS1Q12109 432 aaKnown RBP5.83□□□□□ -1.48
SMD3YLR147C GRX1P25373 110 aaKnown RBP5.82□□□□□ -1.48
SMD3YLR147C THI80P35202 319 aa5.82□□□□□ -1.48
SMD3YLR147C SIZ1Q04195 904 aa5.82□□□□□ -1.48
SMD3YLR147C SGD1Q06132 899 aa5.82□□□□□ -1.48
SMD3YLR147C GAL10P04397 699 aa5.81□□□□□ -1.48
SMD3YLR147C KIN2P13186 1147 aaKnown RBP5.81□□□□□ -1.48
SMD3YLR147C CMP2P14747 604 aa5.81□□□□□ -1.48
SMD3YLR147C PBY1P38254 753 aa5.81□□□□□ -1.48
SMD3YLR147C AIM3P38266 947 aaKnown RBP5.81□□□□□ -1.48
SMD3YLR147C YBR184WP38299 523 aa5.81□□□□□ -1.48
SMD3YLR147C LAM1P38851 1228 aa5.81□□□□□ -1.48
SMD3YLR147C UBP5P39944 805 aa5.81□□□□□ -1.48
SMD3YLR147C IRR1P40541 1150 aa5.81□□□□□ -1.48
SMD3YLR147C GUS1P46655 708 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
SMD3YLR147C XYL2Q07993 356 aa5.81□□□□□ -1.48
SMD3YLR147C MDM38Q08179 573 aa5.81□□□□□ -1.48
SMD3YLR147C YPL277CQ08989 487 aa5.81□□□□□ -1.48
SMD3YLR147C YLL058WQ12198 575 aa5.81□□□□□ -1.48
SMD3YLR147C PRP6P19735 899 aaPredicted RBP5.8□□□□□ -1.48
SMD3YLR147C CDC12P32468 407 aaKnown RBP5.8□□□□□ -1.48
SMD3YLR147C MEF2P39677 819 aa5.8□□□□□ -1.48
SMD3YLR147C MSC2Q03455 724 aa5.8□□□□□ -1.48
SMD3YLR147C YDR132CQ03900 495 aa5.8□□□□□ -1.48
SMD3YLR147C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
SMD3YLR147C GIC1P38785 314 aa5.79□□□□□ -1.48
SMD3YLR147C SAH1P39954 449 aaKnown RBP5.79□□□□□ -1.48
SMD3YLR147C NPP2P39997 493 aa5.79□□□□□ -1.48
SMD3YLR147C PFD1P46988 109 aa5.79□□□□□ -1.48
SMD3YLR147C RIM8P53179 542 aa5.79□□□□□ -1.48
SMD3YLR147C ROT1Q03691 256 aa5.79□□□□□ -1.48
SMD3YLR147C DUS3Q06053 668 aaKnown RBP5.79□□□□□ -1.48
SMD3YLR147C DUS4Q06063 367 aa5.79□□□□□ -1.48
SMD3YLR147C SOD2P00447 233 aa5.78□□□□□ -1.48
SMD3YLR147C RPS13P05756 151 aaKnown RBP5.78□□□□□ -1.48
SMD3YLR147C SRT1Q03175 343 aa5.78□□□□□ -1.48
SMD3YLR147C FMP25Q08023 583 aa5.78□□□□□ -1.48
SMD3YLR147C YAP1801P38856 637 aa5.77□□□□□ -1.49
SMD3YLR147C SRP1Q02821 542 aaKnown RBP5.77□□□□□ -1.49
SMD3YLR147C NAN1Q02931 896 aaKnown RBP5.77□□□□□ -1.49
SMD3YLR147C GCN5Q03330 439 aa5.77□□□□□ -1.49
SMD3YLR147C YDR306CQ06640 478 aa5.77□□□□□ -1.49
SMD3YLR147C HBS1P32769 611 aaKnown RBP5.76□□□□□ -1.49
SMD3YLR147C OSW2Q12202 724 aa5.76□□□□□ -1.49
SMD3YLR147C CDC6P09119 513 aa5.75□□□□□ -1.49
SMD3YLR147C RPL8BP29453 256 aaKnown RBP5.75□□□□□ -1.49
SMD3YLR147C FUN30P31380 1131 aa5.75□□□□□ -1.49
SMD3YLR147C YOR352WQ08816 343 aa5.75□□□□□ -1.49
SMD3YLR147C RAD4P14736 754 aa5.74□□□□□ -1.49
SMD3YLR147C NPP1P25353 742 aa5.74□□□□□ -1.49
SMD3YLR147C AFR1P33304 620 aa5.74□□□□□ -1.49
SMD3YLR147C TOD6P34219 525 aa5.74□□□□□ -1.49
SMD3YLR147C ECM21P38167 1117 aaKnown RBP5.74□□□□□ -1.49
SMD3YLR147C GYP7P48365 746 aa5.74□□□□□ -1.49
SMD3YLR147C UTP8P53276 713 aaKnown RBP5.74□□□□□ -1.49
SMD3YLR147C SFB2P53953 876 aa5.74□□□□□ -1.49
SMD3YLR147C SPT20P50875 604 aa5.73□□□□□ -1.49
SMD3YLR147C PRE10P21242 288 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
SMD3YLR147C CDC20P26309 610 aa5.72□□□□□ -1.49
SMD3YLR147C AAR2P32357 355 aaPredicted RBP5.72□□□□□ -1.49
SMD3YLR147C TSL1P38427 1098 aaKnown RBP5.72□□□□□ -1.49
SMD3YLR147C SIT1P39980 628 aa5.72□□□□□ -1.49
SMD3YLR147C MND2P40577 368 aa5.72□□□□□ -1.49
SMD3YLR147C YJL049WP47048 450 aa5.72□□□□□ -1.49
SMD3YLR147C PBP1P53297 722 aaKnown RBP5.72□□□□□ -1.49
SMD3YLR147C CDA1Q06702 301 aa5.72□□□□□ -1.49
SMD3YLR147C SPO75Q07798 868 aa5.72□□□□□ -1.49
SMD3YLR147C GPB1Q08886 897 aa5.72□□□□□ -1.49
SMD3YLR147C PRP9P19736 530 aaKnown RBP5.71□□□□□ -1.5
SMD3YLR147C PPH3P32345 308 aa5.71□□□□□ -1.5
SMD3YLR147C ZRG8P40021 1076 aa5.71□□□□□ -1.5
SMD3YLR147C ALR2P43553 858 aa5.71□□□□□ -1.5
SMD3YLR147C NNF1P47149 201 aa5.71□□□□□ -1.5
SMD3YLR147C GCV2P49095 1034 aa5.71□□□□□ -1.5
SMD3YLR147C YKE2P52553 114 aa5.71□□□□□ -1.5
SMD3YLR147C GTF1P53260 183 aaPredicted RBP5.71□□□□□ -1.5
SMD3YLR147C VPS62P53285 467 aa5.71□□□□□ -1.5
SMD3YLR147C BUL2Q03758 920 aaKnown RBP5.71□□□□□ -1.5
SMD3YLR147C TPO1Q07824 586 aa5.71□□□□□ -1.5
SMD3YLR147C ADE8P04161 214 aa5.7□□□□□ -1.5
SMD3YLR147C DOM34P33309 386 aa5.7□□□□□ -1.5
SMD3YLR147C YKR078WP36158 585 aaKnown RBP5.7□□□□□ -1.5
SMD3YLR147C YRO2P38079 344 aa5.7□□□□□ -1.5
SMD3YLR147C FLR1P38124 548 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms