RNA–Protein interactions for RNA: YJL020C

BBC1, Transcript of Protein possibly involved in assembly of actin patches, yeast

Gene BBC1, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BBC1	YJL020C	NEW1	Q08972	1196 aa	Known RBP	4.91	□□□□□ -1.62
BBC1	YJL020C	RPL8B	P29453	256 aa	Known RBP	4.91	□□□□□ -1.62
BBC1	YJL020C	CHS3	P29465	1165 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	RAD16	P31244	790 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	DAL1	P32375	460 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	ISF1	P32488	338 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	TFB1	P32776	642 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	TFC4	P33339	1025 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	AKL1	P38080	1108 aa	Known RBP	4.91	□□□□□ -1.62
BBC1	YJL020C	KTR4	P38131	464 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	GPD2	P41911	440 aa	Known RBP	4.91	□□□□□ -1.62
BBC1	YJL020C	SAP155	P43612	1002 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	ZDS2	P54786	942 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	THI22	Q06490	572 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	SAC3	P46674	1301 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	SEC2	P17065	759 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	PRP5	P21372	849 aa	Predicted RBP	4.91	□□□□□ -1.62
BBC1	YJL020C	TPD3	P31383	635 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	VPS35	P34110	944 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	PTH2	P34222	208 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	DSD1	P53095	428 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	HEH2	Q03281	663 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	RUD3	Q12234	484 aa	Known RBP	4.91	□□□□□ -1.62
BBC1	YJL020C	YRF1-3	P0CX14	1859 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	YRF1-7	P0CX15	1859 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	YRF1-6	P53819	1859 aa		4.91	□□□□□ -1.62
BBC1	YJL020C	GLK1	P17709	500 aa	Known RBP	4.9	□□□□□ -1.62
BBC1	YJL020C	PGS1	P25578	521 aa		4.9	□□□□□ -1.62
BBC1	YJL020C	SWC3	P31376	625 aa		4.9	□□□□□ -1.62
BBC1	YJL020C	CDC27	P38042	758 aa		4.9	□□□□□ -1.62
BBC1	YJL020C	TBS1	P38114	1094 aa		4.9	□□□□□ -1.62
BBC1	YJL020C	SOL3	P38858	249 aa		4.9	□□□□□ -1.62
BBC1	YJL020C	VTC4	P47075	721 aa		4.9	□□□□□ -1.62
BBC1	YJL020C	ISM1	P48526	1002 aa		4.9	□□□□□ -1.62
BBC1	YJL020C	SAM37	P50110	327 aa		4.9	□□□□□ -1.62
BBC1	YJL020C	FDC1	Q03034	503 aa		4.9	□□□□□ -1.62
BBC1	YJL020C	ARP9	Q05123	467 aa		4.9	□□□□□ -1.62
BBC1	YJL020C	BMS1	Q08965	1183 aa	Known RBP	4.9	□□□□□ -1.62
BBC1	YJL020C	ROM2	P51862	1356 aa	Known RBP	4.9	□□□□□ -1.63
BBC1	YJL020C	MSS18	P08593	268 aa		4.9	□□□□□ -1.63
BBC1	YJL020C	MRPL25	P23369	157 aa		4.9	□□□□□ -1.63
BBC1	YJL020C	BET3	P36149	193 aa		4.9	□□□□□ -1.63
BBC1	YJL020C	HSM3	P38348	480 aa		4.9	□□□□□ -1.63
BBC1	YJL020C	RIC1	P40395	1056 aa		4.9	□□□□□ -1.63
BBC1	YJL020C	YIL166C	P40445	542 aa		4.9	□□□□□ -1.63
BBC1	YJL020C	YGR273C	P53329	174 aa		4.9	□□□□□ -1.63
BBC1	YJL020C	DBP9	Q06218	594 aa	Known RBP	4.9	□□□□□ -1.63
BBC1	YJL020C	PGA3	Q12746	312 aa	Known RBP	4.9	□□□□□ -1.63
BBC1	YJL020C	CBF2	P32504	956 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	YBR184W	P38299	523 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
BBC1	YJL020C	ARB1	P40024	610 aa	Known RBP	4.89	□□□□□ -1.63
BBC1	YJL020C	TMA108	P40462	946 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	SWA2	Q06677	668 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	IDI1	P15496	288 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	KCC4	P25389	1037 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	RAD54	P32863	898 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	TPA1	P40032	644 aa	Known RBP	4.89	□□□□□ -1.63
BBC1	YJL020C	ROG3	P43602	733 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	HLJ1	P48353	224 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	YGR125W	P53273	1036 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	PBP1	P53297	722 aa	Known RBP	4.89	□□□□□ -1.63
BBC1	YJL020C	PAP2	P53632	584 aa	Known RBP	4.89	□□□□□ -1.63
BBC1	YJL020C	ARA2	Q04212	335 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	ESC8	Q08119	714 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	BUD31	P25337	157 aa	Predicted RBP	4.89	□□□□□ -1.63
BBC1	YJL020C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
BBC1	YJL020C	SRO9	P25567	434 aa	Known RBP	4.89	□□□□□ -1.63
BBC1	YJL020C	NTH2	P35172	780 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	KIC1	P38692	1080 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	POP2	P39008	433 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	SEC26	P41810	973 aa	Known RBP	4.89	□□□□□ -1.63
BBC1	YJL020C	GYP7	P48365	746 aa		4.89	□□□□□ -1.63
BBC1	YJL020C	ACA1	P39970	489 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	MGS1	P40151	587 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	YJL055W	P47044	245 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	MEC3	Q02574	474 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	SPP382	Q06411	708 aa	Predicted RBP	4.88	□□□□□ -1.63
BBC1	YJL020C	OPY2	Q06810	360 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	ATG20	Q07528	640 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	HNM1	P19807	563 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	SFP1	P32432	683 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	GCD6	P32501	712 aa	Known RBP	4.88	□□□□□ -1.63
BBC1	YJL020C	GGA2	P38817	585 aa	Known RBP	4.88	□□□□□ -1.63
BBC1	YJL020C	SPR3	P41901	512 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	MDE1	P47095	244 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	SHE10	P53075	577 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	EIS1	Q05050	843 aa	Known RBP	4.88	□□□□□ -1.63
BBC1	YJL020C	RGA2	Q06407	1009 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	MLC2	Q06580	163 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	RPL5	P26321	297 aa	Known RBP	4.88	□□□□□ -1.63
BBC1	YJL020C	PET309	P32522	965 aa	Predicted RBP	4.88	□□□□□ -1.63
BBC1	YJL020C	ERR3	P42222	437 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	PIL1	P53252	339 aa	Known RBP	4.88	□□□□□ -1.63
BBC1	YJL020C	REX2	P54964	269 aa	Known RBP	4.88	□□□□□ -1.63
BBC1	YJL020C	EEB1	Q02891	456 aa		4.88	□□□□□ -1.63
BBC1	YJL020C	NPL6	P32832	435 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	SUM1	P46676	1062 aa		4.87	□□□□□ -1.63
BBC1	YJL020C	SNP1	Q00916	300 aa	Predicted RBP	4.87	□□□□□ -1.63
BBC1	YJL020C	VPS30	Q02948	557 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 138.9 ms