RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C PRP43P53131 767 aaKnown RBP5.12□□□□□ -1.59
PGD1YGL025C NOP7P53261 605 aaKnown RBP5.12□□□□□ -1.59
PGD1YGL025C SNO2P53823 222 aa5.12□□□□□ -1.59
PGD1YGL025C SHE9Q04172 456 aa5.12□□□□□ -1.59
PGD1YGL025C AIM3P38266 947 aaKnown RBP5.11□□□□□ -1.59
PGD1YGL025C RRT14P40470 206 aa5.11□□□□□ -1.59
PGD1YGL025C HFM1P51979 1187 aa5.11□□□□□ -1.59
PGD1YGL025C PLB2Q03674 706 aa5.11□□□□□ -1.59
PGD1YGL025C RSM24Q03976 319 aa5.11□□□□□ -1.59
PGD1YGL025C HRQ1Q05549 1077 aa5.11□□□□□ -1.59
PGD1YGL025C THS1P04801 734 aaKnown RBP5.1□□□□□ -1.59
PGD1YGL025C PRP6P19735 899 aaPredicted RBP5.1□□□□□ -1.59
PGD1YGL025C APL1P27351 700 aa5.1□□□□□ -1.59
PGD1YGL025C STE5P32917 917 aa5.1□□□□□ -1.59
PGD1YGL025C SNF7P39929 240 aaKnown RBP5.1□□□□□ -1.59
PGD1YGL025C UBP5P39944 805 aa5.1□□□□□ -1.59
PGD1YGL025C SGD1Q06132 899 aa5.1□□□□□ -1.59
PGD1YGL025C SSF2Q12153 453 aaPredicted RBP5.1□□□□□ -1.59
PGD1YGL025C GAL10P04397 699 aa5.09□□□□□ -1.59
PGD1YGL025C CMP2P14747 604 aa5.09□□□□□ -1.59
PGD1YGL025C LAM1P38851 1228 aa5.09□□□□□ -1.59
PGD1YGL025C TAT2P38967 592 aa5.09□□□□□ -1.59
PGD1YGL025C YDR132CQ03900 495 aa5.09□□□□□ -1.59
PGD1YGL025C SIZ1Q04195 904 aa5.09□□□□□ -1.59
PGD1YGL025C TDA5Q06417 326 aaKnown RBP5.09□□□□□ -1.59
PGD1YGL025C YPL277CQ08989 487 aa5.09□□□□□ -1.59
PGD1YGL025C KIN2P13186 1147 aaKnown RBP5.08□□□□□ -1.6
PGD1YGL025C MEF2P39677 819 aa5.08□□□□□ -1.6
PGD1YGL025C RIM8P53179 542 aa5.08□□□□□ -1.6
PGD1YGL025C MSC2Q03455 724 aa5.08□□□□□ -1.6
PGD1YGL025C ROT1Q03691 256 aa5.08□□□□□ -1.6
PGD1YGL025C XYL2Q07993 356 aa5.08□□□□□ -1.6
PGD1YGL025C MDM38Q08179 573 aa5.08□□□□□ -1.6
PGD1YGL025C YLL058WQ12198 575 aa5.08□□□□□ -1.6
PGD1YGL025C SOD2P00447 233 aa5.07□□□□□ -1.6
PGD1YGL025C GRX1P25373 110 aaKnown RBP5.07□□□□□ -1.6
PGD1YGL025C MRP8P35719 219 aa5.07□□□□□ -1.6
PGD1YGL025C PBY1P38254 753 aa5.07□□□□□ -1.6
PGD1YGL025C GUS1P46655 708 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
PGD1YGL025C DUS4Q06063 367 aa5.07□□□□□ -1.6
PGD1YGL025C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
PGD1YGL025C WRS1Q12109 432 aaKnown RBP5.07□□□□□ -1.6
PGD1YGL025C RPS13P05756 151 aaKnown RBP5.06□□□□□ -1.6
PGD1YGL025C CDC12P32468 407 aaKnown RBP5.06□□□□□ -1.6
PGD1YGL025C YBR184WP38299 523 aa5.06□□□□□ -1.6
PGD1YGL025C GIC1P38785 314 aa5.06□□□□□ -1.6
PGD1YGL025C SAH1P39954 449 aaKnown RBP5.06□□□□□ -1.6
PGD1YGL025C NPP2P39997 493 aa5.06□□□□□ -1.6
PGD1YGL025C GCN5Q03330 439 aa5.06□□□□□ -1.6
PGD1YGL025C IRR1P40541 1150 aa5.05□□□□□ -1.6
PGD1YGL025C DUS3Q06053 668 aaKnown RBP5.05□□□□□ -1.6
PGD1YGL025C CDC6P09119 513 aa5.04□□□□□ -1.6
PGD1YGL025C TOD6P34219 525 aa5.04□□□□□ -1.6
PGD1YGL025C YAP1801P38856 637 aa5.04□□□□□ -1.6
PGD1YGL025C PFD1P46988 109 aa5.04□□□□□ -1.6
PGD1YGL025C SRT1Q03175 343 aa5.04□□□□□ -1.6
PGD1YGL025C YOR352WQ08816 343 aa5.04□□□□□ -1.6
PGD1YGL025C SRP1Q02821 542 aaKnown RBP5.03□□□□□ -1.6
PGD1YGL025C YDR306CQ06640 478 aa5.03□□□□□ -1.6
PGD1YGL025C FMP25Q08023 583 aa5.03□□□□□ -1.6
PGD1YGL025C OSW2Q12202 724 aa5.03□□□□□ -1.6
PGD1YGL025C FUN30P31380 1131 aa5.02□□□□□ -1.61
PGD1YGL025C FLR1P38124 548 aa5.02□□□□□ -1.61
PGD1YGL025C SPT20P50875 604 aa5.02□□□□□ -1.61
PGD1YGL025C PRE10P21242 288 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
PGD1YGL025C NPP1P25353 742 aa5.01□□□□□ -1.61
PGD1YGL025C CDC20P26309 610 aa5.01□□□□□ -1.61
PGD1YGL025C RPL8BP29453 256 aaKnown RBP5.01□□□□□ -1.61
PGD1YGL025C HBS1P32769 611 aaKnown RBP5.01□□□□□ -1.61
PGD1YGL025C AFR1P33304 620 aa5.01□□□□□ -1.61
PGD1YGL025C ECM21P38167 1117 aaKnown RBP5.01□□□□□ -1.61
PGD1YGL025C TAF1P46677 1066 aa5.01□□□□□ -1.61
PGD1YGL025C GYP7P48365 746 aa5.01□□□□□ -1.61
PGD1YGL025C SFB2P53953 876 aa5.01□□□□□ -1.61
PGD1YGL025C NAN1Q02931 896 aaKnown RBP5.01□□□□□ -1.61
PGD1YGL025C ESC8Q08119 714 aa5.01□□□□□ -1.61
PGD1YGL025C GPB1Q08886 897 aa5.01□□□□□ -1.61
PGD1YGL025C RAD4P14736 754 aa5□□□□□ -1.61
PGD1YGL025C DOM34P33309 386 aa5□□□□□ -1.61
PGD1YGL025C TSL1P38427 1098 aaKnown RBP5□□□□□ -1.61
PGD1YGL025C MND2P40577 368 aa5□□□□□ -1.61
PGD1YGL025C GCV2P49095 1034 aa5□□□□□ -1.61
PGD1YGL025C GTF1P53260 183 aaPredicted RBP5□□□□□ -1.61
PGD1YGL025C VPS62P53285 467 aa5□□□□□ -1.61
PGD1YGL025C PBP1P53297 722 aaKnown RBP5□□□□□ -1.61
PGD1YGL025C ACK1Q07622 623 aaPredicted RBP5□□□□□ -1.61
PGD1YGL025C TPO1Q07824 586 aa5□□□□□ -1.61
PGD1YGL025C AAR2P32357 355 aaPredicted RBP4.99□□□□□ -1.61
PGD1YGL025C SIT1P39980 628 aa4.99□□□□□ -1.61
PGD1YGL025C ZRG8P40021 1076 aa4.99□□□□□ -1.61
PGD1YGL025C UTP8P53276 713 aaKnown RBP4.99□□□□□ -1.61
PGD1YGL025C CDA1Q06702 301 aa4.99□□□□□ -1.61
PGD1YGL025C RXT3Q07458 294 aa4.99□□□□□ -1.61
PGD1YGL025C HMI1Q12039 706 aa4.99□□□□□ -1.61
PGD1YGL025C EMC1P25574 760 aa4.98□□□□□ -1.61
PGD1YGL025C PPH3P32345 308 aa4.98□□□□□ -1.61
PGD1YGL025C YKR078WP36158 585 aaKnown RBP4.98□□□□□ -1.61
PGD1YGL025C ALR2P43553 858 aa4.98□□□□□ -1.61
PGD1YGL025C YKE2P52553 114 aa4.98□□□□□ -1.61
PGD1YGL025C BUL2Q03758 920 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms