RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W MAD1P40957 749 aa3.77□□□□□ -1.81
NIC96YFR002W RSM24Q03976 319 aa3.77□□□□□ -1.81
NIC96YFR002W ESC8Q08119 714 aa3.77□□□□□ -1.81
NIC96YFR002W TOD6P34219 525 aa3.77□□□□□ -1.81
NIC96YFR002W FLR1P38124 548 aa3.77□□□□□ -1.81
NIC96YFR002W MEF2P39677 819 aa3.77□□□□□ -1.81
NIC96YFR002W TAF1P46677 1066 aa3.77□□□□□ -1.81
NIC96YFR002W SNU71P53207 620 aaKnown RBP3.77□□□□□ -1.81
NIC96YFR002W SIZ1Q04195 904 aa3.77□□□□□ -1.81
NIC96YFR002W GAL10P04397 699 aa3.76□□□□□ -1.81
NIC96YFR002W CMP2P14747 604 aa3.76□□□□□ -1.81
NIC96YFR002W MTC3P53077 123 aa3.76□□□□□ -1.81
NIC96YFR002W ROT1Q03691 256 aa3.76□□□□□ -1.81
NIC96YFR002W DUS4Q06063 367 aa3.76□□□□□ -1.81
NIC96YFR002W TY1B-DR4Q07793 1604 aa3.76□□□□□ -1.81
NIC96YFR002W NAP1P25293 417 aaKnown RBP3.76□□□□□ -1.81
NIC96YFR002W PAM1P37304 830 aaKnown RBP3.76□□□□□ -1.81
NIC96YFR002W GCN5Q03330 439 aa3.76□□□□□ -1.81
NIC96YFR002W YCR015CP25616 317 aa3.75□□□□□ -1.81
NIC96YFR002W APL1P27351 700 aa3.75□□□□□ -1.81
NIC96YFR002W YKL151CP36059 337 aa3.75□□□□□ -1.81
NIC96YFR002W YKL069WP36088 180 aa3.75□□□□□ -1.81
NIC96YFR002W RRT14P40470 206 aa3.75□□□□□ -1.81
NIC96YFR002W HFM1P51979 1187 aa3.75□□□□□ -1.81
NIC96YFR002W FAL1Q12099 399 aaKnown RBP3.75□□□□□ -1.81
NIC96YFR002W CWC24P53769 259 aa3.75□□□□□ -1.81
NIC96YFR002W MSC2Q03455 724 aa3.75□□□□□ -1.81
NIC96YFR002W HRQ1Q05549 1077 aa3.75□□□□□ -1.81
NIC96YFR002W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
NIC96YFR002W KIN2P13186 1147 aaKnown RBP3.74□□□□□ -1.81
NIC96YFR002W AGP1P25376 633 aa3.74□□□□□ -1.81
NIC96YFR002W PIN4P34217 668 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
NIC96YFR002W XYL2Q07993 356 aa3.74□□□□□ -1.81
NIC96YFR002W OPI10Q08202 246 aa3.74□□□□□ -1.81
NIC96YFR002W CDC6P09119 513 aa3.74□□□□□ -1.81
NIC96YFR002W PRE10P21242 288 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
NIC96YFR002W SBA1P28707 216 aaKnown RBP3.74□□□□□ -1.81
NIC96YFR002W ALD6P54115 500 aaKnown RBP3.74□□□□□ -1.81
NIC96YFR002W YOR352WQ08816 343 aa3.74□□□□□ -1.81
NIC96YFR002W MBP1P39678 833 aa3.73□□□□□ -1.81
NIC96YFR002W SPT20P50875 604 aa3.73□□□□□ -1.81
NIC96YFR002W THS1P04801 734 aaKnown RBP3.73□□□□□ -1.81
NIC96YFR002W PRI2P20457 528 aa3.73□□□□□ -1.81
NIC96YFR002W GIP4P39732 760 aa3.73□□□□□ -1.81
NIC96YFR002W VAC8P39968 578 aa3.72□□□□□ -1.81
NIC96YFR002W YKL222CP35995 705 aa3.72□□□□□ -1.81
NIC96YFR002W VBA5P36172 582 aa3.72□□□□□ -1.81
NIC96YFR002W CLU1Q03690 1277 aaKnown RBP3.72□□□□□ -1.81
NIC96YFR002W MDM38Q08179 573 aa3.72□□□□□ -1.81
NIC96YFR002W CDC20P26309 610 aa3.71□□□□□ -1.82
NIC96YFR002W DOM34P33309 386 aa3.71□□□□□ -1.82
NIC96YFR002W SNF7P39929 240 aaKnown RBP3.71□□□□□ -1.82
NIC96YFR002W SHE9Q04172 456 aa3.71□□□□□ -1.82
NIC96YFR002W YLL058WQ12198 575 aa3.71□□□□□ -1.82
NIC96YFR002W YLR358CO13565 187 aa3.71□□□□□ -1.82
NIC96YFR002W GIC1P38785 314 aa3.71□□□□□ -1.82
NIC96YFR002W NPP2P39997 493 aa3.71□□□□□ -1.82
NIC96YFR002W VPS62P53285 467 aa3.71□□□□□ -1.82
NIC96YFR002W GPB1Q08886 897 aa3.71□□□□□ -1.82
NIC96YFR002W CDC12P32468 407 aaKnown RBP3.7□□□□□ -1.82
NIC96YFR002W YAP1801P38856 637 aa3.7□□□□□ -1.82
NIC96YFR002W GCV2P49095 1034 aa3.7□□□□□ -1.82
NIC96YFR002W GTF1P53260 183 aaPredicted RBP3.7□□□□□ -1.82
NIC96YFR002W SRT1Q03175 343 aa3.7□□□□□ -1.82
NIC96YFR002W ACK1Q07622 623 aaPredicted RBP3.7□□□□□ -1.82
NIC96YFR002W HMI1Q12039 706 aa3.7□□□□□ -1.82
NIC96YFR002W MND2P40577 368 aa3.7□□□□□ -1.82
NIC96YFR002W RXT3Q07458 294 aa3.7□□□□□ -1.82
NIC96YFR002W STE5P32917 917 aa3.69□□□□□ -1.82
NIC96YFR002W TAT2P38967 592 aa3.69□□□□□ -1.82
NIC96YFR002W SPF1P39986 1215 aaKnown RBP3.69□□□□□ -1.82
NIC96YFR002W KRI1P42846 591 aaKnown RBP3.69□□□□□ -1.82
NIC96YFR002W PBP1P53297 722 aaKnown RBP3.69□□□□□ -1.82
NIC96YFR002W YAP6Q03935 383 aa3.69□□□□□ -1.82
NIC96YFR002W OSW2Q12202 724 aa3.69□□□□□ -1.82
NIC96YFR002W CTS1P29029 562 aa3.69□□□□□ -1.82
NIC96YFR002W EMC1P25574 760 aa3.68□□□□□ -1.82
NIC96YFR002W FUN30P31380 1131 aa3.68□□□□□ -1.82
NIC96YFR002W LST4P34239 828 aa3.68□□□□□ -1.82
NIC96YFR002W SAH1P39954 449 aaKnown RBP3.68□□□□□ -1.82
NIC96YFR002W ZRG8P40021 1076 aa3.68□□□□□ -1.82
NIC96YFR002W GUS1P46655 708 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
NIC96YFR002W ADY3Q07732 790 aa3.68□□□□□ -1.82
NIC96YFR002W TPO1Q07824 586 aa3.68□□□□□ -1.82
NIC96YFR002W DUS3Q06053 668 aaKnown RBP3.68□□□□□ -1.82
NIC96YFR002W CDA1Q06702 301 aa3.68□□□□□ -1.82
NIC96YFR002W MRP8P35719 219 aa3.67□□□□□ -1.82
NIC96YFR002W ECM21P38167 1117 aaKnown RBP3.67□□□□□ -1.82
NIC96YFR002W SFB2P53953 876 aa3.67□□□□□ -1.82
NIC96YFR002W SSF2Q12153 453 aaPredicted RBP3.67□□□□□ -1.82
NIC96YFR002W SHM2P37291 469 aaKnown RBP3.67□□□□□ -1.82
NIC96YFR002W YLR224WQ05947 369 aa3.67□□□□□ -1.82
NIC96YFR002W TDA5Q06417 326 aaKnown RBP3.67□□□□□ -1.82
NIC96YFR002W AFR1P33304 620 aa3.66□□□□□ -1.82
NIC96YFR002W MPT5P39016 859 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
NIC96YFR002W MET12P46151 657 aa3.66□□□□□ -1.82
NIC96YFR002W SRP1Q02821 542 aaKnown RBP3.66□□□□□ -1.82
NIC96YFR002W TMA10Q06177 86 aa3.66□□□□□ -1.82
NIC96YFR002W NOP12Q08208 459 aaKnown RBP3.66□□□□□ -1.82
NIC96YFR002W ENA1P13587 1091 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms