RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C MUM2P38236 366 aa6.75□□□□□ -1.33
VPS72YDR485C JJJ2P46997 583 aa6.75□□□□□ -1.33
VPS72YDR485C MEP3P53390 489 aa6.75□□□□□ -1.33
VPS72YDR485C YDL129WQ07555 291 aa6.75□□□□□ -1.33
VPS72YDR485C RTG1P32607 177 aa6.74□□□□□ -1.33
VPS72YDR485C BEM3P32873 1128 aa6.74□□□□□ -1.33
VPS72YDR485C RRN3P36070 627 aa6.74□□□□□ -1.33
VPS72YDR485C MPH1P40562 993 aa6.74□□□□□ -1.33
VPS72YDR485C QRI7P43122 407 aa6.74□□□□□ -1.33
VPS72YDR485C ALG2P43636 503 aa6.74□□□□□ -1.33
VPS72YDR485C NMD3P38861 518 aaKnown RBP6.74□□□□□ -1.33
VPS72YDR485C GZF3P42944 551 aaKnown RBP6.74□□□□□ -1.33
VPS72YDR485C GUS1P46655 708 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
VPS72YDR485C CUS1Q02554 436 aaPredicted RBP6.74□□□□□ -1.33
VPS72YDR485C DED1P06634 604 aaKnown RBP6.73□□□□□ -1.33
VPS72YDR485C HVG1P0CE11 249 aa6.73□□□□□ -1.33
VPS72YDR485C DBP5P20449 482 aaKnown RBP6.73□□□□□ -1.33
VPS72YDR485C AFR1P33304 620 aa6.73□□□□□ -1.33
VPS72YDR485C ERT1P38140 529 aa6.73□□□□□ -1.33
VPS72YDR485C BIT2P38346 545 aa6.73□□□□□ -1.33
VPS72YDR485C YBR287WP38355 427 aa6.73□□□□□ -1.33
VPS72YDR485C SIT1P39980 628 aa6.73□□□□□ -1.33
VPS72YDR485C TSR2Q06672 205 aaKnown RBP6.73□□□□□ -1.33
VPS72YDR485C RPP2BP02400 110 aaKnown RBP6.73□□□□□ -1.33
VPS72YDR485C ECM32P32644 1121 aaKnown RBP6.73□□□□□ -1.33
VPS72YDR485C VPS8P39702 1274 aa6.73□□□□□ -1.33
VPS72YDR485C PAP2P53632 584 aaKnown RBP6.73□□□□□ -1.33
VPS72YDR485C CLF1Q12309 687 aaPredicted RBP6.73□□□□□ -1.33
VPS72YDR485C URA1P28272 314 aaPredicted RBP6.72□□□□□ -1.33
VPS72YDR485C YDR338CQ05497 695 aa6.72□□□□□ -1.33
VPS72YDR485C PSR1Q07800 427 aa6.72□□□□□ -1.33
VPS72YDR485C YER152CP10356 443 aa6.72□□□□□ -1.33
VPS72YDR485C IRE1P32361 1115 aa6.72□□□□□ -1.33
VPS72YDR485C CAF16P43569 289 aa6.72□□□□□ -1.33
VPS72YDR485C GYP8P43570 497 aa6.72□□□□□ -1.33
VPS72YDR485C CNN1P43618 361 aa6.72□□□□□ -1.33
VPS72YDR485C SKP1P52286 194 aa6.72□□□□□ -1.33
VPS72YDR485C SXM1Q04175 944 aaKnown RBP6.72□□□□□ -1.33
VPS72YDR485C NBA1Q08229 501 aaKnown RBP6.72□□□□□ -1.33
VPS72YDR485C TY1A-DR3Q12441 440 aa6.72□□□□□ -1.33
VPS72YDR485C TY1A-LR4P0C2I8 440 aaKnown RBP6.71□□□□□ -1.34
VPS72YDR485C TY1A-DR6P0CX70 440 aa6.71□□□□□ -1.34
VPS72YDR485C TY1A-ER1P0CX71 440 aa6.71□□□□□ -1.34
VPS72YDR485C TY1A-LR2P0CX72 440 aa6.71□□□□□ -1.34
VPS72YDR485C TY1A-PLP0CX73 440 aa6.71□□□□□ -1.34
VPS72YDR485C TY1A-JR1P0CX74 440 aa6.71□□□□□ -1.34
VPS72YDR485C TY1A-LR3P0CX75 440 aa6.71□□□□□ -1.34
VPS72YDR485C TY1A-ML2P0CX76 440 aa6.71□□□□□ -1.34
VPS72YDR485C DLD3P39976 496 aaKnown RBP6.71□□□□□ -1.34
VPS72YDR485C VTC2P43585 828 aa6.71□□□□□ -1.34
VPS72YDR485C MNN11P46985 422 aaKnown RBP6.71□□□□□ -1.34
VPS72YDR485C AIM14P53109 570 aa6.71□□□□□ -1.34
VPS72YDR485C GTR1Q00582 310 aa6.71□□□□□ -1.34
VPS72YDR485C ECM9Q02202 377 aa6.71□□□□□ -1.34
VPS72YDR485C YDR306CQ06640 478 aa6.71□□□□□ -1.34
VPS72YDR485C IRC3Q06683 689 aa6.71□□□□□ -1.34
VPS72YDR485C TY1A-GR1Q12085 440 aa6.71□□□□□ -1.34
VPS72YDR485C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.71□□□□□ -1.34
VPS72YDR485C TY1A-OLQ92392 440 aaKnown RBP6.71□□□□□ -1.34
VPS72YDR485C AFG2P32794 780 aa6.71□□□□□ -1.34
VPS72YDR485C PES4P39684 611 aa6.71□□□□□ -1.34
VPS72YDR485C HOL1P53389 586 aa6.71□□□□□ -1.34
VPS72YDR485C YNR040WP53736 256 aa6.71□□□□□ -1.34
VPS72YDR485C SPO71Q03868 1245 aa6.71□□□□□ -1.34
VPS72YDR485C EST2Q06163 884 aa6.71□□□□□ -1.34
VPS72YDR485C ATG33Q06485 197 aa6.71□□□□□ -1.34
VPS72YDR485C GUD1Q07729 489 aa6.71□□□□□ -1.34
VPS72YDR485C SIS1P25294 352 aaKnown RBP6.7□□□□□ -1.34
VPS72YDR485C SER1P33330 395 aaKnown RBP6.7□□□□□ -1.34
VPS72YDR485C TMA108P40462 946 aa6.7□□□□□ -1.34
VPS72YDR485C MOT3P54785 490 aaKnown RBP6.7□□□□□ -1.34
VPS72YDR485C CEG1Q01159 459 aaPredicted RBP6.7□□□□□ -1.34
VPS72YDR485C ECM38Q05902 660 aaPredicted RBP6.7□□□□□ -1.34
VPS72YDR485C RMP1Q12530 201 aa6.7□□□□□ -1.34
VPS72YDR485C MCD4P36051 919 aa6.69□□□□□ -1.34
VPS72YDR485C MCM7P38132 845 aa6.69□□□□□ -1.34
VPS72YDR485C CAF120P53836 1060 aa6.69□□□□□ -1.34
VPS72YDR485C IMH1Q06704 911 aaKnown RBP6.69□□□□□ -1.34
VPS72YDR485C TRK1P12685 1235 aa6.69□□□□□ -1.34
VPS72YDR485C NUP120P35729 1037 aa6.69□□□□□ -1.34
VPS72YDR485C PSH1Q12161 406 aa6.69□□□□□ -1.34
VPS72YDR485C GLO4Q12320 285 aa6.69□□□□□ -1.34
VPS72YDR485C HMG1P12683 1054 aa6.68□□□□□ -1.34
VPS72YDR485C PFK1P16861 987 aaKnown RBP6.68□□□□□ -1.34
VPS72YDR485C APE4P38821 490 aa6.68□□□□□ -1.34
VPS72YDR485C PTC2P39966 464 aaKnown RBP6.68□□□□□ -1.34
VPS72YDR485C CCT5P40413 562 aaKnown RBP6.68□□□□□ -1.34
VPS72YDR485C UPF3P48412 387 aaKnown RBP6.68□□□□□ -1.34
VPS72YDR485C YML082WQ04533 649 aaKnown RBP6.68□□□□□ -1.34
VPS72YDR485C EIS1Q05050 843 aaKnown RBP6.68□□□□□ -1.34
VPS72YDR485C RSC3Q06639 885 aa6.68□□□□□ -1.34
VPS72YDR485C OPY2Q06810 360 aa6.68□□□□□ -1.34
VPS72YDR485C LDB19Q12502 818 aa6.68□□□□□ -1.34
VPS72YDR485C RPS21AP0C0V8 87 aaKnown RBP6.68□□□□□ -1.34
VPS72YDR485C SLA1P32790 1244 aa6.68□□□□□ -1.34
VPS72YDR485C MSN5P52918 1224 aa6.68□□□□□ -1.34
VPS72YDR485C GFA1P14742 717 aaKnown RBP6.67□□□□□ -1.34
VPS72YDR485C COX11P19516 300 aaKnown RBP6.67□□□□□ -1.34
VPS72YDR485C MSM1P22438 575 aa6.67□□□□□ -1.34
VPS72YDR485C MIH1P23748 554 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms