RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W DID4P36108 232 aa2.78□□□□□ -1.96
SWR1YDR334W SPF1P39986 1215 aaKnown RBP2.78□□□□□ -1.96
SWR1YDR334W CIK1Q01649 594 aa2.78□□□□□ -1.96
SWR1YDR334W RIX7Q07844 837 aaKnown RBP2.78□□□□□ -1.96
SWR1YDR334W RKM4Q12504 494 aa2.78□□□□□ -1.96
SWR1YDR334W BRR1Q99177 341 aaPredicted RBP2.78□□□□□ -1.96
SWR1YDR334W MHP1P43638 1398 aa2.78□□□□□ -1.96
SWR1YDR334W YCL049CP25577 312 aa2.78□□□□□ -1.96
SWR1YDR334W NAB2P32505 525 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
SWR1YDR334W GYP6P32806 458 aa2.78□□□□□ -1.96
SWR1YDR334W MTO1P53070 669 aa2.78□□□□□ -1.96
SWR1YDR334W SRC1Q03707 834 aa2.78□□□□□ -1.96
SWR1YDR334W DAL4Q04895 635 aa2.78□□□□□ -1.96
SWR1YDR334W ATG26Q06321 1198 aa2.78□□□□□ -1.96
SWR1YDR334W OPT2Q06593 877 aa2.78□□□□□ -1.96
SWR1YDR334W MEI5P32489 222 aa2.78□□□□□ -1.97
SWR1YDR334W EHT1P38295 451 aa2.78□□□□□ -1.97
SWR1YDR334W YHL008CP38750 627 aa2.78□□□□□ -1.97
SWR1YDR334W RPS26AP39938 119 aaKnown RBP2.78□□□□□ -1.97
SWR1YDR334W RPS26BP39939 119 aaKnown RBP2.78□□□□□ -1.97
SWR1YDR334W JJJ3P47138 172 aa2.78□□□□□ -1.97
SWR1YDR334W OCA1P50946 238 aaPredicted RBP2.78□□□□□ -1.97
SWR1YDR334W MEC3Q02574 474 aa2.78□□□□□ -1.97
SWR1YDR334W GSF2Q04697 403 aaKnown RBP2.78□□□□□ -1.97
SWR1YDR334W TOS4Q06266 489 aa2.78□□□□□ -1.97
SWR1YDR334W VHS3Q08438 674 aa2.78□□□□□ -1.97
SWR1YDR334W NOP14Q99207 810 aaKnown RBP2.78□□□□□ -1.97
SWR1YDR334W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SWR1YDR334W ROX1P25042 368 aa2.77□□□□□ -1.97
SWR1YDR334W DUR3P33413 735 aa2.77□□□□□ -1.97
SWR1YDR334W PIN4P34217 668 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SWR1YDR334W ROG3P43602 733 aa2.77□□□□□ -1.97
SWR1YDR334W ENP2P48234 707 aaKnown RBP2.77□□□□□ -1.97
SWR1YDR334W RNR4P49723 345 aaKnown RBP2.77□□□□□ -1.97
SWR1YDR334W YNR040WP53736 256 aa2.77□□□□□ -1.97
SWR1YDR334W TY1A-DR2Q03964 440 aaKnown RBP2.77□□□□□ -1.97
SWR1YDR334W RPC37P36121 282 aa2.77□□□□□ -1.97
SWR1YDR334W AIR1P40507 360 aaKnown RBP2.77□□□□□ -1.97
SWR1YDR334W SPO71Q03868 1245 aa2.77□□□□□ -1.97
SWR1YDR334W DBP5P20449 482 aaKnown RBP2.77□□□□□ -1.97
SWR1YDR334W RAD27P26793 382 aa2.77□□□□□ -1.97
SWR1YDR334W TFC1P32367 649 aa2.77□□□□□ -1.97
SWR1YDR334W VPS24P36095 224 aaKnown RBP2.77□□□□□ -1.97
SWR1YDR334W YBR238CP38330 731 aaKnown RBP2.77□□□□□ -1.97
SWR1YDR334W SIT1P39980 628 aa2.77□□□□□ -1.97
SWR1YDR334W PRK1P40494 810 aa2.77□□□□□ -1.97
SWR1YDR334W MAD1P40957 749 aa2.77□□□□□ -1.97
SWR1YDR334W GTR1Q00582 310 aa2.77□□□□□ -1.97
SWR1YDR334W EEB1Q02891 456 aa2.77□□□□□ -1.97
SWR1YDR334W SPC110P32380 944 aa2.76□□□□□ -1.97
SWR1YDR334W SFA1P32771 386 aa2.76□□□□□ -1.97
SWR1YDR334W RGD1P38339 666 aa2.76□□□□□ -1.97
SWR1YDR334W IRR1P40541 1150 aa2.76□□□□□ -1.97
SWR1YDR334W VPS53P47061 822 aa2.76□□□□□ -1.97
SWR1YDR334W YJR124CP47159 448 aa2.76□□□□□ -1.97
SWR1YDR334W ESF2P53743 316 aaKnown RBP2.76□□□□□ -1.97
SWR1YDR334W RSA3Q05942 220 aaKnown RBP2.76□□□□□ -1.97
SWR1YDR334W RVB2Q12464 471 aaKnown RBP2.76□□□□□ -1.97
SWR1YDR334W SIR4P11978 1358 aa2.76□□□□□ -1.97
SWR1YDR334W TOP1P04786 769 aa2.76□□□□□ -1.97
SWR1YDR334W DSE4P53753 1117 aa2.76□□□□□ -1.97
SWR1YDR334W FAR11P53917 953 aa2.76□□□□□ -1.97
SWR1YDR334W NAM8Q00539 523 aaKnown RBP2.76□□□□□ -1.97
SWR1YDR334W GIS4Q04233 774 aa2.76□□□□□ -1.97
SWR1YDR334W SOV1Q04748 898 aa2.76□□□□□ -1.97
SWR1YDR334W HDA2Q06629 674 aa2.76□□□□□ -1.97
SWR1YDR334W YPL260WQ08977 551 aa2.76□□□□□ -1.97
SWR1YDR334W KEL3Q08979 651 aaPredicted RBP2.76□□□□□ -1.97
SWR1YDR334W MGM1P32266 881 aa2.76□□□□□ -1.97
SWR1YDR334W BUD2P33314 1104 aa2.76□□□□□ -1.97
SWR1YDR334W MRPL16P38064 232 aa2.76□□□□□ -1.97
SWR1YDR334W SPT8P38915 602 aa2.76□□□□□ -1.97
SWR1YDR334W HNT2P49775 206 aa2.76□□□□□ -1.97
SWR1YDR334W UTP22P53254 1237 aaPredicted RBP2.76□□□□□ -1.97
SWR1YDR334W CUZ1P53899 274 aa2.76□□□□□ -1.97
SWR1YDR334W EIS1Q05050 843 aaKnown RBP2.76□□□□□ -1.97
SWR1YDR334W OPI10Q08202 246 aa2.76□□□□□ -1.97
SWR1YDR334W YRF1-4O13559 1382 aa2.76□□□□□ -1.97
SWR1YDR334W HEM13P11353 328 aaKnown RBP2.76□□□□□ -1.97
SWR1YDR334W LYP1P32487 611 aa2.76□□□□□ -1.97
SWR1YDR334W RRN3P36070 627 aa2.76□□□□□ -1.97
SWR1YDR334W PBY1P38254 753 aa2.76□□□□□ -1.97
SWR1YDR334W YBP1P38315 674 aa2.76□□□□□ -1.97
SWR1YDR334W PEX28P38848 579 aa2.76□□□□□ -1.97
SWR1YDR334W RIX1P38883 763 aaPredicted RBP2.76□□□□□ -1.97
SWR1YDR334W NOC2P39744 710 aaKnown RBP2.76□□□□□ -1.97
SWR1YDR334W FET4P40988 552 aa2.76□□□□□ -1.97
SWR1YDR334W IOC3P43596 787 aa2.76□□□□□ -1.97
SWR1YDR334W MTR4P47047 1073 aaKnown RBP2.76□□□□□ -1.97
SWR1YDR334W PCL10P53124 433 aa2.76□□□□□ -1.97
SWR1YDR334W YNR065CP53751 1116 aa2.76□□□□□ -1.97
SWR1YDR334W SLU7Q02775 382 aaKnown RBP2.76□□□□□ -1.97
SWR1YDR334W VMS1Q04311 632 aaKnown RBP2.76□□□□□ -1.97
SWR1YDR334W ATG13Q06628 738 aa2.76□□□□□ -1.97
SWR1YDR334W RTC1Q08281 1341 aa2.75□□□□□ -1.97
SWR1YDR334W CPA2P03965 1118 aaKnown RBP2.75□□□□□ -1.97
SWR1YDR334W SAS3P34218 831 aa2.75□□□□□ -1.97
SWR1YDR334W TFA2P36145 328 aa2.75□□□□□ -1.97
SWR1YDR334W BAP2P38084 609 aa2.75□□□□□ -1.97
SWR1YDR334W YHR020WP38708 688 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms