RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C RSM24Q03976 319 aa4.56□□□□□ -1.68
AFR1YDR085C THS1P04801 734 aaKnown RBP4.55□□□□□ -1.68
AFR1YDR085C SRM1P21827 482 aa4.55□□□□□ -1.68
AFR1YDR085C MBP1P39678 833 aa4.55□□□□□ -1.68
AFR1YDR085C RRT14P40470 206 aa4.55□□□□□ -1.68
AFR1YDR085C SGD1Q06132 899 aa4.55□□□□□ -1.68
AFR1YDR085C VBA5P36172 582 aa4.54□□□□□ -1.68
AFR1YDR085C MTC3P53077 123 aa4.54□□□□□ -1.68
AFR1YDR085C SHE9Q04172 456 aa4.54□□□□□ -1.68
AFR1YDR085C YPL277CQ08989 487 aa4.54□□□□□ -1.68
AFR1YDR085C SOD2P00447 233 aa4.54□□□□□ -1.68
AFR1YDR085C RPS13P05756 151 aaKnown RBP4.54□□□□□ -1.68
AFR1YDR085C KIN2P13186 1147 aaKnown RBP4.54□□□□□ -1.68
AFR1YDR085C APL1P27351 700 aa4.54□□□□□ -1.68
AFR1YDR085C YKL151CP36059 337 aa4.54□□□□□ -1.68
AFR1YDR085C LAM1P38851 1228 aa4.54□□□□□ -1.68
AFR1YDR085C RIM8P53179 542 aa4.54□□□□□ -1.68
AFR1YDR085C PLB2Q03674 706 aa4.54□□□□□ -1.68
AFR1YDR085C HFM1P51979 1187 aa4.53□□□□□ -1.68
AFR1YDR085C YDR132CQ03900 495 aa4.53□□□□□ -1.68
AFR1YDR085C SIZ1Q04195 904 aa4.53□□□□□ -1.68
AFR1YDR085C HRQ1Q05549 1077 aa4.53□□□□□ -1.68
AFR1YDR085C GAL10P04397 699 aa4.52□□□□□ -1.69
AFR1YDR085C CMP2P14747 604 aa4.52□□□□□ -1.69
AFR1YDR085C MEF2P39677 819 aa4.52□□□□□ -1.69
AFR1YDR085C SPF1P39986 1215 aaKnown RBP4.52□□□□□ -1.69
AFR1YDR085C NOP7P53261 605 aaKnown RBP4.52□□□□□ -1.69
AFR1YDR085C MSC2Q03455 724 aa4.52□□□□□ -1.69
AFR1YDR085C ROT1Q03691 256 aa4.52□□□□□ -1.69
AFR1YDR085C YOR352WQ08816 343 aa4.52□□□□□ -1.69
AFR1YDR085C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
AFR1YDR085C YLL058WQ12198 575 aa4.52□□□□□ -1.69
AFR1YDR085C GCN5Q03330 439 aa4.51□□□□□ -1.69
AFR1YDR085C DUS4Q06063 367 aa4.51□□□□□ -1.69
AFR1YDR085C TOD6P34219 525 aa4.5□□□□□ -1.69
AFR1YDR085C MRP8P35719 219 aa4.5□□□□□ -1.69
AFR1YDR085C TDA5Q06417 326 aaKnown RBP4.5□□□□□ -1.69
AFR1YDR085C XYL2Q07993 356 aa4.5□□□□□ -1.69
AFR1YDR085C MDM38Q08179 573 aa4.5□□□□□ -1.69
AFR1YDR085C SSF2Q12153 453 aaPredicted RBP4.5□□□□□ -1.69
AFR1YDR085C STE5P32917 917 aa4.49□□□□□ -1.69
AFR1YDR085C SAH1P39954 449 aaKnown RBP4.49□□□□□ -1.69
AFR1YDR085C WRS1Q12109 432 aaKnown RBP4.49□□□□□ -1.69
AFR1YDR085C CDC12P32468 407 aaKnown RBP4.48□□□□□ -1.69
AFR1YDR085C PBY1P38254 753 aa4.48□□□□□ -1.69
AFR1YDR085C GIC1P38785 314 aa4.48□□□□□ -1.69
AFR1YDR085C YAP1801P38856 637 aa4.48□□□□□ -1.69
AFR1YDR085C IRR1P40541 1150 aa4.48□□□□□ -1.69
AFR1YDR085C GUS1P46655 708 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
AFR1YDR085C SPT20P50875 604 aa4.48□□□□□ -1.69
AFR1YDR085C SRP1Q02821 542 aaKnown RBP4.48□□□□□ -1.69
AFR1YDR085C SRT1Q03175 343 aa4.48□□□□□ -1.69
AFR1YDR085C DUS3Q06053 668 aaKnown RBP4.48□□□□□ -1.69
AFR1YDR085C OSW2Q12202 724 aa4.48□□□□□ -1.69
AFR1YDR085C CDC6P09119 513 aa4.47□□□□□ -1.69
AFR1YDR085C GRX1P25373 110 aaKnown RBP4.47□□□□□ -1.69
AFR1YDR085C TAT2P38967 592 aa4.47□□□□□ -1.69
AFR1YDR085C NPP2P39997 493 aa4.47□□□□□ -1.69
AFR1YDR085C ESC8Q08119 714 aa4.47□□□□□ -1.69
AFR1YDR085C PRE10P21242 288 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
AFR1YDR085C FUN30P31380 1131 aa4.47□□□□□ -1.69
AFR1YDR085C DOM34P33309 386 aa4.47□□□□□ -1.69
AFR1YDR085C FLR1P38124 548 aa4.47□□□□□ -1.69
AFR1YDR085C YBR184WP38299 523 aa4.47□□□□□ -1.69
AFR1YDR085C PBP1P53297 722 aaKnown RBP4.47□□□□□ -1.69
AFR1YDR085C TAF1P46677 1066 aa4.46□□□□□ -1.7
AFR1YDR085C PFD1P46988 109 aa4.46□□□□□ -1.7
AFR1YDR085C YDR306CQ06640 478 aa4.46□□□□□ -1.7
AFR1YDR085C GPB1Q08886 897 aa4.46□□□□□ -1.7
AFR1YDR085C YLR358CO13565 187 aa4.45□□□□□ -1.7
AFR1YDR085C CDC20P26309 610 aa4.45□□□□□ -1.7
AFR1YDR085C ECM21P38167 1117 aaKnown RBP4.45□□□□□ -1.7
AFR1YDR085C MND2P40577 368 aa4.45□□□□□ -1.7
AFR1YDR085C GTF1P53260 183 aaPredicted RBP4.45□□□□□ -1.7
AFR1YDR085C RXT3Q07458 294 aa4.45□□□□□ -1.7
AFR1YDR085C ACK1Q07622 623 aaPredicted RBP4.45□□□□□ -1.7
AFR1YDR085C ZRG8P40021 1076 aa4.45□□□□□ -1.7
AFR1YDR085C GCV2P49095 1034 aa4.45□□□□□ -1.7
AFR1YDR085C VPS62P53285 467 aa4.45□□□□□ -1.7
AFR1YDR085C YCR015CP25616 317 aa4.44□□□□□ -1.7
AFR1YDR085C GYP7P48365 746 aa4.44□□□□□ -1.7
AFR1YDR085C SFB2P53953 876 aa4.44□□□□□ -1.7
AFR1YDR085C NAN1Q02931 896 aaKnown RBP4.44□□□□□ -1.7
AFR1YDR085C CLU1Q03690 1277 aaKnown RBP4.44□□□□□ -1.7
AFR1YDR085C FMP25Q08023 583 aa4.44□□□□□ -1.7
AFR1YDR085C HMI1Q12039 706 aa4.44□□□□□ -1.7
AFR1YDR085C HBS1P32769 611 aaKnown RBP4.43□□□□□ -1.7
AFR1YDR085C AFR1P33304 620 aa4.43□□□□□ -1.7
AFR1YDR085C CDA1Q06702 301 aa4.43□□□□□ -1.7
AFR1YDR085C ADY3Q07732 790 aa4.43□□□□□ -1.7
AFR1YDR085C TPO1Q07824 586 aa4.43□□□□□ -1.7
AFR1YDR085C ENA1P13587 1091 aa4.43□□□□□ -1.7
AFR1YDR085C PRP9P19736 530 aaKnown RBP4.43□□□□□ -1.7
AFR1YDR085C NPP1P25353 742 aa4.43□□□□□ -1.7
AFR1YDR085C EMC1P25574 760 aa4.43□□□□□ -1.7
AFR1YDR085C PPH3P32345 308 aa4.43□□□□□ -1.7
AFR1YDR085C AAR2P32357 355 aaPredicted RBP4.43□□□□□ -1.7
AFR1YDR085C GIP4P39732 760 aa4.43□□□□□ -1.7
AFR1YDR085C SIT1P39980 628 aa4.43□□□□□ -1.7
AFR1YDR085C YGR012WP53206 393 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms