RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Nlgn1Q99K10 843 aa16.34■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Map2P20357 1828 aa16.33■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Rps6ka5Q8C050 863 aa16.33■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Pof1bQ8K4L4 587 aa16.33■□□□□ 0.2
Clcn4-203ENSMUST00000210061 HypkQ9CR41 129 aa16.33■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Stx6Q9JKK1 255 aa16.33■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Col16a1Q8BLX7 1580 aa16.33■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Ube2hP62257 183 aa16.33■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Zfp51Q3U4L8 781 aa16.33■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Rufy3Q9D394 469 aa16.33■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Zfp804bA0A0G2JGH6 1343 aa16.32■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Cct4P80315 539 aaKnown RBP16.32■□□□□ 0.2
Clcn4-203ENSMUST00000210061 SrrtQ99MR6 875 aaKnown RBP16.32■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Med4Q9CQA5 270 aa16.32■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Gm21190A0A0G2JGJ6 266 aa16.31■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Tnnt1O88346 262 aa16.31■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Cyp2d11P24457 504 aa16.31■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Adcy5P84309 1262 aa16.31■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Hvcn1Q3U2S8 269 aa16.31■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Stk3Q9JI10 497 aa16.31■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Nckap5lQ6GQX2 1323 aa16.31■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Ccdc178Q8CDV0 866 aa16.31■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Naa30Q8CES0 364 aa16.31■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Pcmtd1P59913 357 aa16.3■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Samm50Q8BGH2 469 aa16.3■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Smc3Q9CW03 1217 aaKnown RBP16.3■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Zscan22Q8BGS5 496 aa16.3■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Add2Q9QYB8 725 aa16.3■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Rreb1Q3UH06 1700 aaKnown RBP16.29■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Cnksr1A2A9K7 700 aa16.29■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Lekr1B2RVN1 116 aa16.29■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Syt1P46096 421 aa16.29■□□□□ 0.2
Clcn4-203ENSMUST00000210061 CoilQ5SU73 570 aa16.29■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Scn7aB1AYL1 1681 aa16.29■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Sox12Q04890 314 aa16.29■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Slc4a10Q5DTL9 1118 aa16.29■□□□□ 0.2
Clcn4-203ENSMUST00000210061 DpydQ8CHR6 1025 aa16.29■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Mx2Q9WVP9 655 aa16.29■□□□□ 0.2
Clcn4-203ENSMUST00000210061 EzrP26040 586 aaKnown RBP16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Kif3aP28741 701 aa16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Sytl4Q9R0Q1 673 aa16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Abcc10Q8R4P9 1501 aa16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Nphp3Q7TNH6 1325 aa16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Hoxc9P09633 260 aa16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Tlr7P58681 1050 aa16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Ncbp1Q3UYV9 790 aaKnown RBP16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Rad17Q6NXW6 688 aa16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Brf1Q8CFK2 676 aa16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Atg3Q9CPX6 314 aa16.28■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Top1mtQ8R4U6 593 aa16.27■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Ahnak2E9PYB0 1738 aaKnown RBP16.27■□□□□ 0.2
Clcn4-203ENSMUST00000210061 Tti2Q8BGV4 512 aa16.27■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Cchcr1Q8K2I2 770 aa16.27■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Inpp5bQ8K337 993 aa16.27■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Utp3Q9JI13 469 aaKnown RBP16.27■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Idi1P58044 227 aa16.26■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Chd2E9PZM4 1827 aaKnown RBP16.26■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Ppfia1B2RXQ2 1266 aa16.26■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Cfap73J3QPZ5 306 aa16.26■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Zap70P43404 618 aa16.26■□□□□ 0.19
Clcn4-203ENSMUST00000210061 EappQ5BU09 281 aa16.26■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Grpel1Q99LP6 217 aa16.26■□□□□ 0.19
Clcn4-203ENSMUST00000210061 PtprvP70289 1705 aa16.26■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Ptgs1P22437 602 aa16.25■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Mcm3P25206 812 aaKnown RBP16.25■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Bend3Q6PAL0 825 aa16.25■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Tceal9Q9DD24 104 aa16.25■□□□□ 0.19
Clcn4-203ENSMUST00000210061 1700006A11RikB9EHI3 544 aa16.25■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Arap3Q8R5G7 1538 aa16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Cavin1O54724 392 aa16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Gsdma3Q5Y4Y6 464 aa16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Ifit2Q64112 472 aa16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Wdr24Q8CFJ9 790 aa16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Q9D9S1 216 aa16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Irx6Q9ER75 438 aa16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Mon2Q80TL7 1715 aa16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Arfgef2A2A5R2 1792 aa16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 MsnP26041 577 aaKnown RBP16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 EspnlQ3UYR4 1005 aa16.24■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Rims2Q9EQZ7 1530 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Usp48Q3V0C5 1052 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Nup88Q8CEC0 753 aaKnown RBP16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Echdc1Q9D9V3 322 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Mmel1Q9JLI3 765 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Gm45140A0A0N4SUM8 220 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Exoc6bA6H5Z3 810 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Cfdp1O88271 295 aaKnown RBP16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 F2rP30558 430 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Cd22P35329 862 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Ccdc162pQ0VG85 912 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Sf3a1Q8K4Z5 791 aaKnown RBP16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 PdcQ9QW08 244 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Igbp1bQ9QZ29 343 aa16.23■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Klhl34A2AI76 644 aa16.22■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Eif4a1P60843 406 aaKnown RBP16.22■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Babam1Q3UI43 333 aa16.22■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Gys2Q8VCB3 704 aa16.22■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Mad1l1Q9WTX8 717 aaKnown RBP16.22■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Fyb1O35601 819 aa16.21■□□□□ 0.19
Clcn4-203ENSMUST00000210061 Tmem132eQ6IEE6 982 aa16.21■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms