RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Pdzph1Q8BGR1 1238 aa10.84□□□□□ -0.67
Scn8a-207ENSMUST00000200959 Plin1Q8CGN5 517 aa10.84□□□□□ -0.67
Scn8a-207ENSMUST00000200959 Pbx4Q99NE9 378 aa10.84□□□□□ -0.67
Scn8a-207ENSMUST00000200959 Scn9aQ62205 1984 aa10.83□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Strn4P58404 760 aa10.83□□□□□ -0.68
Scn8a-207ENSMUST00000200959 MpripP97434 1024 aa10.83□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Smg7Q5RJH6 1138 aaKnown RBP10.83□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Kcnc4Q8R1C0 628 aa10.83□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Ptf1aQ9QX98 324 aa10.83□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Lrrc43Q3V0L5 667 aa10.82□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Ccdc155Q80VJ8 648 aa10.82□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Dcdc2bF7BCK0 340 aa10.81□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Llgl2Q3TJ91 1027 aa10.81□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Ssfa2Q922B9 1252 aa10.81□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Col4a1P02463 1669 aa10.81□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Ubn2Q80WC1 1314 aa10.81□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Nav1Q8CH77 1875 aa10.81□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Ubr2Q6WKZ8 1755 aa10.8□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Ep400Q8CHI8 3072 aaKnown RBP10.8□□□□□ -0.68
Scn8a-207ENSMUST00000200959 AfdnQ9QZQ1 1820 aaKnown RBP10.8□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Zbtb1Q91VL9 713 aa10.8□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Slc4a1apE9PX68 744 aa10.79□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Sox10Q04888 466 aa10.78□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Scaf8Q6DID3 1268 aa10.78□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Chmp7Q8R1T1 451 aa10.78□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Nsfl1cQ9CZ44 370 aaKnown RBP10.78□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Zfyve9A2A8R0 1397 aa10.77□□□□□ -0.68
Scn8a-207ENSMUST00000200959 Hoxb7P09024 217 aa10.77□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Dll1Q61483 722 aa10.77□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Ppargc1bQ8VHJ7 1014 aa10.77□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Ripk3Q9QZL0 486 aa10.77□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Tiam2Q6ZPF3 1715 aa10.77□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Csf1rP09581 977 aa10.76□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Pou3f3P31361 497 aa10.76□□□□□ -0.69
Scn8a-207ENSMUST00000200959 B230104I21RikQ3USW4 141 aa10.76□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Slc24a1Q91WD8 1130 aa10.76□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Ubxn2aQ99KJ0 258 aa10.76□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Aox2Q5SGK3 1345 aa10.76□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Szt2A2A9C3 3431 aa10.75□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Mansc4Q3UU94 337 aa10.75□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Foxn1Q61575 648 aa10.75□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Rad17Q6NXW6 688 aa10.75□□□□□ -0.69
Scn8a-207ENSMUST00000200959 AceP09470 1312 aa10.75□□□□□ -0.69
Scn8a-207ENSMUST00000200959 IbtkQ6ZPR6 1352 aaKnown RBP10.75□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Col6a3E9PWQ3 3284 aa10.75□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Prdm11A2AGX3 565 aa10.74□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Olfr247E9PVJ7 320 aa10.73□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Olfr819K7N727 320 aa10.73□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Fhdc1Q3ULZ2 1149 aa10.73□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Arid3aQ62431 601 aa10.73□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Gpr101Q80T62 511 aa10.73□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Efcab2Q9CQ46 164 aa10.73□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Ambra1A2AH22 1300 aa10.73□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Prpmp5E9PXN1 296 aa10.72□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Snap23O09044 210 aa10.72□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Mcm10Q0VBD2 885 aa10.72□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Dok7Q18PE0 504 aa10.72□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Dpf2Q61103 391 aaKnown RBP10.72□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Slc51aQ8R000 340 aa10.72□□□□□ -0.69
Scn8a-207ENSMUST00000200959 PigbQ9JJQ0 542 aa10.72□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Ddx60E9PZQ1 1711 aa10.72□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Lrch1P62046 709 aa10.71□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Evi5P97366 809 aa10.71□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Sp8Q8BMJ8 486 aa10.71□□□□□ -0.69
Scn8a-207ENSMUST00000200959 DiexfQ8BTT6 772 aaKnown RBP10.71□□□□□ -0.69
Scn8a-207ENSMUST00000200959 Vil1Q62468 827 aa10.7□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Rsph6aQ8CDR2 708 aa10.7□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Tcerg1Q8CGF7 1100 aaKnown RBP10.7□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Nip7Q9CXK8 180 aaKnown RBP10.7□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Arih1Q9Z1K5 555 aa10.7□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Btaf1E9QAE3 1848 aa10.7□□□□□ -0.7
Scn8a-207ENSMUST00000200959 NynrinQ5DTZ0 1840 aa10.7□□□□□ -0.7
Scn8a-207ENSMUST00000200959 NinQ61043 2035 aa10.68□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Mrc1Q61830 1456 aa10.68□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Lama3Q61789 3330 aa10.68□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Lama4P97927 1816 aa10.68□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Cntnap3E9PY62 1287 aa10.68□□□□□ -0.7
Scn8a-207ENSMUST00000200959 PnnO35691 725 aaKnown RBP10.68□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Angel2Q8K1C0 544 aa10.68□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Dclk1Q9JLM8 756 aa10.68□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Prr14lE9Q7C4 1971 aa10.67□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Pde4dQ01063 747 aa10.67□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Snai1Q02085 264 aa10.67□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Dcaf11Q91VU6 549 aa10.67□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Igf2bp3Q9CPN8 579 aaKnown RBP10.67□□□□□ -0.7
Scn8a-207ENSMUST00000200959 HttP42859 3119 aa10.67□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Zmynd8A2A484 1235 aaKnown RBP10.66□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Prr5lA2AVJ5 370 aa10.66□□□□□ -0.7
Scn8a-207ENSMUST00000200959 LtbrP50284 415 aa10.66□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Ankrd13cQ3UX43 541 aa10.66□□□□□ -0.7
Scn8a-207ENSMUST00000200959 RubcnQ80U62 956 aa10.66□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Amotl1Q9D4H4 968 aa10.66□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Dpf1Q9QX66 387 aa10.66□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Pcdh15Q99PJ1 1943 aa10.66□□□□□ -0.7
Scn8a-207ENSMUST00000200959 MetP16056 1379 aa10.65□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Gm42688A0A0R3P9D1 673 aa10.65□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Brpf1B2RRD7 1212 aa10.65□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Chrna5Q2MKA5 467 aa10.65□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Zc3h15Q3TIV5 426 aaKnown RBP10.65□□□□□ -0.7
Scn8a-207ENSMUST00000200959 Thrap3Q569Z6 951 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms