Protein–RNA interactions for Protein: Q8BGR1

Pdzph1, MCG20355, mousemouse

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzph1Q8BGR1 Gm25239-201ENSMUST00000174915 86 ntBASIC48,93■■■■■ 5,42
Pdzph1Q8BGR1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC45,5■■■■■ 4,87
Pdzph1Q8BGR1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC44,8■■■■■ 4,76
Pdzph1Q8BGR1 Gm24109-201ENSMUST00000175489 103 ntBASIC42,64■■■■■ 4,42
Pdzph1Q8BGR1 Gm15042-201ENSMUST00000120212 883 ntBASIC42,24■■■■■ 4,35
Pdzph1Q8BGR1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC41,35■■■■■ 4,21
Pdzph1Q8BGR1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC41,28■■■■■ 4,2
Pdzph1Q8BGR1 Gm15045-201ENSMUST00000117359 883 ntBASIC41,22■■■■■ 4,19
Pdzph1Q8BGR1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC41,19■■■■■ 4,18
Pdzph1Q8BGR1 Gm23366-201ENSMUST00000175022 89 ntBASIC40,8■■■■■ 4,12
Pdzph1Q8BGR1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC40,71■■■■■ 4,11
Pdzph1Q8BGR1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC39,98■■■■□ 3,99
Pdzph1Q8BGR1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC39,6■■■■□ 3,93
Pdzph1Q8BGR1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC39,57■■■■□ 3,93
Pdzph1Q8BGR1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC39,52■■■■□ 3,92
Pdzph1Q8BGR1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39,49■■■■□ 3,91
Pdzph1Q8BGR1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC39,31■■■■□ 3,88
Pdzph1Q8BGR1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC39,13■■■■□ 3,85
Pdzph1Q8BGR1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39,04■■■■□ 3,84
Pdzph1Q8BGR1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC38,97■■■■□ 3,83
Pdzph1Q8BGR1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC38,84■■■■□ 3,81
Pdzph1Q8BGR1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC38,83■■■■□ 3,81
Pdzph1Q8BGR1 Gm25238-201ENSMUST00000174914 89 ntBASIC38,8■■■■□ 3,8
Pdzph1Q8BGR1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38,76■■■■□ 3,8
Pdzph1Q8BGR1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38,3■■■■□ 3,72
Pdzph1Q8BGR1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38,02■■■■□ 3,68
Pdzph1Q8BGR1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC38,01■■■■□ 3,68
Pdzph1Q8BGR1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37,88■■■■□ 3,65
Pdzph1Q8BGR1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC37,86■■■■□ 3,65
Pdzph1Q8BGR1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37,85■■■■□ 3,65
Pdzph1Q8BGR1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37,84■■■■□ 3,65
Pdzph1Q8BGR1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC37,7■■■■□ 3,63
Pdzph1Q8BGR1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37,57■■■■□ 3,61
Pdzph1Q8BGR1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37,56■■■■□ 3,6
Pdzph1Q8BGR1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37,5■■■■□ 3,59
Pdzph1Q8BGR1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC37,49■■■■□ 3,59
Pdzph1Q8BGR1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC37,49■■■■□ 3,59
Pdzph1Q8BGR1 Gm25262-201ENSMUST00000174934 133 ntBASIC37,43■■■■□ 3,58
Pdzph1Q8BGR1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC37,28■■■■□ 3,56
Pdzph1Q8BGR1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37,23■■■■□ 3,55
Pdzph1Q8BGR1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC37,1■■■■□ 3,53
Pdzph1Q8BGR1 Gm27325-201ENSMUST00000175467 74 ntBASIC36,93■■■■□ 3,5
Pdzph1Q8BGR1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC36,9■■■■□ 3,5
Pdzph1Q8BGR1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC36,79■■■■□ 3,48
Pdzph1Q8BGR1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36,78■■■■□ 3,48
Pdzph1Q8BGR1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36,74■■■■□ 3,47
Pdzph1Q8BGR1 Gm26115-201ENSMUST00000175605 87 ntBASIC36,71■■■■□ 3,47
Pdzph1Q8BGR1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC36,69■■■■□ 3,46
Pdzph1Q8BGR1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC36,61■■■■□ 3,45
Pdzph1Q8BGR1 Rab21-202ENSMUST00000218831 843 ntBASIC36,6■■■■□ 3,45
Pdzph1Q8BGR1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC36,57■■■■□ 3,44
Pdzph1Q8BGR1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36,51■■■■□ 3,43
Pdzph1Q8BGR1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36,47■■■■□ 3,43
Pdzph1Q8BGR1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36,47■■■■□ 3,43
Pdzph1Q8BGR1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC36,46■■■■□ 3,43
Pdzph1Q8BGR1 Gm8109-201ENSMUST00000194076 746 ntBASIC36,44■■■■□ 3,42
Pdzph1Q8BGR1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC36,39■■■■□ 3,42
Pdzph1Q8BGR1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC36,38■■■■□ 3,41
Pdzph1Q8BGR1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36,32■■■■□ 3,4
Pdzph1Q8BGR1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36,31■■■■□ 3,4
Pdzph1Q8BGR1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36,24■■■■□ 3,39
Pdzph1Q8BGR1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36,12■■■■□ 3,37
Pdzph1Q8BGR1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC36,12■■■■□ 3,37
Pdzph1Q8BGR1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36,03■■■■□ 3,36
Pdzph1Q8BGR1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35,9■■■■□ 3,34
Pdzph1Q8BGR1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35,83■■■■□ 3,33
Pdzph1Q8BGR1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35,78■■■■□ 3,32
Pdzph1Q8BGR1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35,74■■■■□ 3,31
Pdzph1Q8BGR1 Psd-208ENSMUST00000224556 2034 ntBASIC35,67■■■■□ 3,3
Pdzph1Q8BGR1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35,65■■■■□ 3,3
Pdzph1Q8BGR1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35,65■■■■□ 3,3
Pdzph1Q8BGR1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35,62■■■■□ 3,29
Pdzph1Q8BGR1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC35,61■■■■□ 3,29
Pdzph1Q8BGR1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35,57■■■■□ 3,28
Pdzph1Q8BGR1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC35,54■■■■□ 3,28
Pdzph1Q8BGR1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC35,53■■■■□ 3,28
Pdzph1Q8BGR1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35,52■■■■□ 3,28
Pdzph1Q8BGR1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35,49■■■■□ 3,27
Pdzph1Q8BGR1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35,44■■■■□ 3,26
Pdzph1Q8BGR1 Gm17082-201ENSMUST00000166043 1091 ntBASIC35,42■■■■□ 3,26
Pdzph1Q8BGR1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC35,37■■■■□ 3,25
Pdzph1Q8BGR1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35,35■■■■□ 3,25
Pdzph1Q8BGR1 Gm24804-201ENSMUST00000174982 85 ntBASIC35,22■■■■□ 3,23
Pdzph1Q8BGR1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35,17■■■■□ 3,22
Pdzph1Q8BGR1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35,13■■■■□ 3,21
Pdzph1Q8BGR1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35,11■■■■□ 3,21
Pdzph1Q8BGR1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35,09■■■■□ 3,21
Pdzph1Q8BGR1 Gm27322-201ENSMUST00000184007 104 ntBASIC35,06■■■■□ 3,2
Pdzph1Q8BGR1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC35,06■■■■□ 3,2
Pdzph1Q8BGR1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35,05■■■■□ 3,2
Pdzph1Q8BGR1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35,05■■■■□ 3,2
Pdzph1Q8BGR1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35,02■■■■□ 3,2
Pdzph1Q8BGR1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34,95■■■■□ 3,18
Pdzph1Q8BGR1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34,94■■■■□ 3,18
Pdzph1Q8BGR1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34,91■■■■□ 3,18
Pdzph1Q8BGR1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC34,9■■■■□ 3,18
Pdzph1Q8BGR1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34,9■■■■□ 3,18
Pdzph1Q8BGR1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34,85■■■■□ 3,17
Pdzph1Q8BGR1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34,84■■■■□ 3,17
Pdzph1Q8BGR1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC34,77■■■■□ 3,16
Retrieved 100 of 76,532 protein–RNA pairs in 11,9 ms